Contig 013513:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF048J20Sequence403013513 (3)ref|XP_006346657.1|5e-55PREDICTED: methylecgonone reductase-like [Solanum tuberosum]343017028ref|XP_003607112.1|2e-11hypothetical protein MTR_4g072350 [Medicago truncatula]
JMSF042J11Sequence777013513 (3)ref|XP_004252294.1|8e-114PREDICTED: methylecgonone reductase-like [Solanum lycopersicum]839013513 (3)ref|XP_009595905.1|8e-88PREDICTED: methylecgonone reductase-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF042J11-                     GCTCACTTTTGTACCCAACAAAATCACAATCTCTTTAAATTATTTAATA
                      ____________________________________________________________
consensus                        GCTCACTTTTGTACCCAACAAAATCACAATCTCTTTAAATTATTTAATA
 
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rJMSF042J11-          CATTGAAAATTAAAGTTGAGAATACAAGCTAGCTTTCTTAGAATATCAATAATGATGAAA
                      ____________________________________________________________
consensus             CATTGAAAATTAAAGTTGAGAATACAAGCTAGCTTTCTTAGAATATCAATAATGATGAAA
 
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rJMSF042J11-          GTTGATGTACTCCAACTTAATTATTAGCACACTCATCAACATAATATATATCTTCCAATC
                      ____________________________________________________________
consensus             GTTGATGTACTCCAACTTAATTATTAGCACACTCATCAACATAATATATATCTTCCAATC
 
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rJMSF042J11-          ATAGTTGCTTAATTATATATCCCCATCCCACAATTCCTCAACAGATTTGTATGGTCCATT
                      ____________________________________________________________
consensus             ATAGTTGCTTAATTATATATCCCCATCCCACAATTCCTCAACAGATTTGTATGGTCCATT
 
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rJMSF042J11-          TGAATGAACAAACTCCTCTCCTTTAAATCCTCTGCACTGTGGTAGTTGTTCAATCTTATC
                      ____________________________________________________________
consensus             TGAATGAACAAACTCCTCTCCTTTAAATCCTCTGCACTGTGGTAGTTGTTCAATCTTATC
 
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rJMSF042J11-          AATTTCTTCATCATTCAGTTCACACTCATCATCAAAGATATGAAGGTTTTCCTTCATCCT
                      ____________________________________________________________
consensus             AATTTCTTCATCATTCAGTTCACACTCATCATCAAAGATATGAAGGTTTTCCTTCATCCT
 
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rJMSF042J11-          TTCTTTGTTAAAACTCTTCACAATCACACTTGCTCCTTGTTGATATACCCATCTCAAAGC
                      ____________________________________________________________
consensus             TTCTTTGTTAAAACTCTTCACAATCACACTTGCTCCTTGTTGATATACCCATCTCAAAGC
 
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rJMSF042J11-          GACCTGTGCAATGGTGTTGTGCTTAGCTTGTGCAATATCCTTAAGTAGTGGGATTTCCAA
JMSF042J11+             CCTGTGCAATGGTGTTGTGCTTAGCTTGTGCAATATCCTTAAGTAGTGGGATTTCCAA
                      ____________________________________________________________
consensus             GACCTGTGCAATGGTGTTGTGCTTAGCTTGTGCAATATCCTTAAGTAGTGGGATTTCCAA
 
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rJMSF042J11-          TATCCCATGGGAGCCCCAAAACCCAGCACCTAAATTCCCTAGAGGACTCCATGCGCTAAT
JMSF042J11+           TATCCCATGGGAGCCCCAAAACCCAGCACCTAAATTCCCTAGAGGACTCCATGCGCTAAT
                      ____________________________________________________________
consensus             TATCCCATGGGAGCCCCAAAACCCAGCACCTAAATTCCCTAGAGGACTCCATGCGCTAAT
 
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rJMSF042J11-          ATGAATTCCTTTCTCTCCGCAAAACTTTAATAAGCCTCCTTGCTGCCATGCAACACTCAT
JMSF042J11+           ATGAATTCCTTTCTCTCCGCAAAACTTTAATAAGCCTCCTTGCTGCCATGCAACACTCAT
                      ____________________________________________________________
consensus             ATGAATTCCTTTCTCTCCGCAAAACTTTAATAAGCCTCCTTGCTGCCATGCAACACTCAT
 
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rJMSF042J11-          CTCTACCTGATTAACAGCAGGAGGAATGGTAGCATTGTGGAGGAGTTTAGAAATCTTAGT
JMSF042J11+           CTCTACCTGATTAACAGCAGGAGGAATGGTAGCATTGTGGAGGAGTTTAGAAATCTTAGT
                      ____________________________________________________________
consensus             CTCTACCTGATTAACAGCAGGAGGAATGGTAGCATTGTGGAGGAGTTTAGAAATCTTAGT
 
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rJMSF042J11-          TGAAGTGAAGTTAGACACACCAATGGACTTAGCCAAGCCCAAGTTGTGACACTCTTCCAT
JMSF042J11+           TGAAGTGAAGTTAGACACACCAATGGACTTAGCCAAGCCCAAGTTGTGACACTCTTCCAT
                      ____________________________________________________________
consensus             TGAAGTGAAGTTAGACACACCAATGGACTTAGCCAAGCCCAAGTTGTGACACTCTTCCAT
 
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rJMSF042J11-          CCCTTCCCATGTCCCTTTCATGTCAAAAGGAATGATGTTTTCTGTTTTAATCTCCNAGCT
JMSF042J11+           CCCTTCCCATGTCCCTTTCATGTCAAAAGGAATGATGTTTTCTGTTTTAATCTCCAAGCT
                      ____________________________________________________________
consensus             CCCTTCCCATGTCCCTTTCATGTCAAAAGGAATGATGTTTTCTGTTTTAATCTCCAAGCT
 
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rJMSF042J11-          CTCTTTGGGCATCCNTCATCCTTAGTGGCCAATGTACTAAATATAAATCCACATAATCTA
JMFF048J20+                    CATCCTTCATCCTTAGTGGCCAATGTACTAAATATAAATCCACATAATCTA
JMSF042J11+           CTCTTT-GGCATCCTTCATCCTTAGTGGCCAATGTACTAAATATAAATCCACATAATCTA
                      ____________________________________________________________
consensus             CTCTTTGGGCATCCTTCATCCTTAGTGGCCAATGTACTAAATATAAATCCACATAATCTA
 
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rJMSF042J11-          GTCCCAACCT                                                  
JMFF048J20+           GTCCCAACCTCCCCAGCGATCTCTTGAGTGCCGGAAGGACAAGATGACGGTCCGTTTCGG
JMSF042J11+           GTCCCAACCTCCCCAGCGATCTCTTGAGTGCCGGAAGGACAAGATGACGGTCCGTTTCGG
                      ____________________________________________________________
consensus             GTCCCAACCTCCCCAGCGATCTCTTGAGTGCCGGAAGGACAAGATGACGGTCCGTTTCGG
 
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JMFF048J20+           TGATCCAAAGCTTAGAGGTGATGAAGAGTTGGTCGCGGCCGGAAACAAGGCGGCGTTGGA
JMSF042J11+           TGATCCAAAGCTTAGAGGTGATGAAGAGTTGGTCGCGGCCGGAAACAAGGCGGCGTTGGA
                      ____________________________________________________________
consensus             TGATCCAAAGCTTAGAGGTGATGAAGAGTTGGTCGCGGCCGGAAACAAGGCGGCGTTGGA
 
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JMFF048J20+           TTGCAGCGGCCACCGCACGGCCCAGGGCCTCCTCGGAGCCGTAAGCGGCGGCGGTGTCAA
JMSF042J11+           TTGCAGCGGCCACCGCACGGCCCAGGGCCTCCTCGGAGCCGTAAGCGGCGGCGGTGTCAA
                      ____________________________________________________________
consensus             TTGCAGCGGCCACCGCACGGCCCAGGGCCTCCTCGGAGCCGTAAGCGGCGGCGGTGTCAA
 
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JMFF048J20+           AGTGACGGTACCCGATCTCAATGGCATGAATGAGAGATGATATCAACTCGTCCTGGTCTG
JMSF042J11+           AGTGACGGTACCCGATCTCAATGGCATGAATGAGAGATGATATCAACTCGTCCTGGTCTG
                      ____________________________________________________________
consensus             AGTGACGGTACCCGATCTCAATGGCATGAATGAGAGATGATATCAACTCGTCCTGGTCTG
 
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JMFF048J20+           GAAGTGAGGGAAACGCAGTTCCCATAGCTAAAACAGGCATTTCATGGCCGGAGTTAAGCT
JMSF042J11+           GAAGTGAGGGAAACGCAGTTCCCATAGCTAAAACAGGCATTTCATGGCCGGAGTTAAGCT
                      ____________________________________________________________
consensus             GAAGTGAGGGAAACGCAGTTCCCATAGCTAAAACAGGCATTTCATGGCCGGAGTTAAGCT
 
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JMFF048J20+           TCACTTTTGGGACTTCAATCACTCCCTCCATATCTGATCTTAGCTAGCTTCT        
JMSF042J11+           TCACTTTTGGGACTTCAATCACTCCCTCCATATCTGATCTTAGCTAGCTTCTAAATGATC
                      ____________________________________________________________
consensus             TCACTTTTGGGACTTCAATCACTCCCTCCATATCTGATCTTAGCTAGCTTCTAAATGATC