Contig 013511:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF042C19-                                                                GTAACG
                      ____________________________________________________________
consensus                                                                   GTAACG
 
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rJMSF042C19-          CGGTGCACGTCAAGGCTAACATGCCAACTTGCCGTGAATCTTGTGATTCATAAAGGTAAC
                      ____________________________________________________________
consensus             CGGTGCACGTCAAGGCTAACATGCCAACTTGCCGTGAATCTTGTGATTCATAAAGGTAAC
 
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rJMSF042C19-          ATCAATTCATTGTCTCTCTTTTGATTTAAATAAGGTAATGCACCAAGCCAACTGCCGGAA
                      ____________________________________________________________
consensus             ATCAATTCATTGTCTCTCTTTTGATTTAAATAAGGTAATGCACCAAGCCAACTGCCGGAA
 
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rJMSF042C19-          AATATCAACCTATCTTTCATCAATTATTTTGTGTCGGTGATTTCATTAAAGAATTAGTAT
                      ____________________________________________________________
consensus             AATATCAACCTATCTTTCATCAATTATTTTGTGTCGGTGATTTCATTAAAGAATTAGTAT
 
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rJMSF042C19-          CAAATCTGGATGCATGCCCCTAGTAACTCAGGCCAAGCTGTAATCCGAGGGCAAAGTGGA
                      ____________________________________________________________
consensus             CAAATCTGGATGCATGCCCCTAGTAACTCAGGCCAAGCTGTAATCCGAGGGCAAAGTGGA
 
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rJMSF042C19-          CAAGAAATAGTGTCATTATTCCACTCCCCAGTATGCCATGAACATTCCTCAATCCGGGGT
JMSF042C19+                                                                CCGGGGT
                      ____________________________________________________________
consensus             CAAGAAATAGTGTCATTATTCCACTCCCCAGTATGCCATGAACATTCCTCAATCCGGGGT
 
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rJMSF042C19-          TTCCCTCAAAAAGTGCAGGCAAGAGTGTCTGTATGGTCAGAAGAGATAGGCCAATGAGGC
JMSF042C19+           TTCCCTCAAAAAGTGCAGGCAAGAGTGTCTGTATGGTCAGAAGAGATAGGCCAATGAGGC
                      ____________________________________________________________
consensus             TTCCCTCAAAAAGTGCAGGCAAGAGTGTCTGTATGGTCAGAAGAGATAGGCCAATGAGGC
 
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rJMSF042C19-          CAGTCACTGCATGAGGGCTTTCCAAGATGGGTTTGTTTGAAGTGAGCAAAGAAGTTATCC
JMFN040F24+                                               TTGAAGTGAGCAAAGAAGTTATCC
JMSF042C19+           CAGTCACTGCATGAGGGCTTTCCAAGATGGGTTTGTTTGAAGTGAGCAAAGAAGTTATCC
                      ____________________________________________________________
consensus             CAGTCACTGCATGAGGGCTTTCCAAGATGGGTTTGTTTGAAGTGAGCAAAGAAGTTATCC
 
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rJMSF042C19-          CTCCAGTAGCTCCAAGAGCAAAGAAGAAGAACATTCCAGCAAGGAGTTTGGGATGCAAAT
JMFN040F24+           CTCCAGTAGCTCCAAGAGCAAAGAAGAAGAACATTCCAGCAAGGAGTTTGGGATGCAAAT
JMSF042C19+           CTCCAGTAGCTCCAAGAGCAAAGAAGAAGAACATTCCAGCAAGGAGTTTGGGATGCAAAT
                      ____________________________________________________________
consensus             CTCCAGTAGCTCCAAGAGCAAAGAAGAAGAACATTCCAGCAAGGAGTTTGGGATGCAAAT
 
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rJMSF042C19-          CTTTGGCTTTTGCTTTTTCCTCCACATCATTAGAAAACCGGATTCTGAATCCCAGGTAAG
JMFN040F24+           CTTTGGCTTTTGCTTTTTCCTCCACATCATTAGAAAACCGGATTCTGAATCCCAGGTAAG
JMSF042C19+           CTTTGGCTTTTGCTTTTTCCTCCACATCATTAGAAAACCGGATTCTGAATCCCAGGTAAG
                      ____________________________________________________________
consensus             CTTTGGCTTTTGCTTTTTCCTCCACATCATTAGAAAACCGGATTCTGAATCCCAGGTAAG
 
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rJMSF042C19-          TTCCATAACCACCCATGGCAAAGAGCACAACAGCCATGTTGCCGGGATGGCCCCAGTGCA
JMFN040F24+           TTCCATAACCACCCATGGCAAAGAGCACAACAGCCATGTTGCCGGGATGGCCCCAGTGCA
JMSF042C19+           TTCCATAACCACCCATGGCAAAGAGCACAACAGCCATGTTGCCGGGATGGCCCCAGTGCA
                      ____________________________________________________________
consensus             TTCCATAACCACCCATGGCAAAGAGCACAACAGCCATGTTGCCGGGATGGCCCCAGTGCA
 
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rJMSF042C19-          CGAGCCAGTCAGGAAGGTTCAATGATTTAACGACCTCAACGAACGGTCCAAACACAGACC
JMFN040F24+           CGAGCCAGTCAGGAAGGTTCAATGATTTAACGACCTCAACGAACGGTCCAAACACAGACC
JMSF042C19+           CGAGCCAGTCAGGAAGGTTCAATGATTTAACGACCTCAACGAACGGTCCAAACACAGACC
                      ____________________________________________________________
consensus             CGAGCCAGTCAGGAAGGTTCAATGATTTAACGACCTCAACGAACGGTCCAAACACAGACC
 
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rJMSF042C19-          TCACAGCTCCAGCTCCTGGAAGAGCAGCCACAAACAGCAATGGCGAAGGAGTGAAGGAGT
JMFN040F24+           TCACAGCTCCAGCTCCTGGAAGAGCAGCCACAAACAGCAATGGCGAAGGAGTGAAGGAGT
JMSF042C19+           TCACAGCTCCAGCTCCTGGAAGAGCAGCCACAAACAGCAATGGCGAAGGAGTGAAGGAGT
                      ____________________________________________________________
consensus             TCACAGCTCCAGCTCCTGGAAGAGCAGCCACAAACAGCAATGGCGAAGGAGTGAAGGAGT
 
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rJMSF042C19-          ACAGCAGAGTCTCAGTACGAGGTTTCTCTGTCACTGCTTCATCTTCTTCGTCTTCAACTA
JMFN040F24+           ACAGCAGAGTCTCAGTACGAGGTTTCTCTGTCACTGCTTCATCTTCTTCGTCTTCAACTA
JMSF042C19+           ACAGCAGAGTCTCAGTACGAGGTTTCTCTGTCACTGCTTCATCTTCTTCGTCTTCAACTA
                      ____________________________________________________________
consensus             ACAGCAGAGTCTCAGTACGAGGTTTCTCTGTCACTGCTTCATCTTCTTCGTCTTCAACTA
 
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rJMSF042C19-          TTATATCAACAGCAACCTCAGAGCTACACCTATTCTTCNAAGCAAAAACA          
JMFN040F24+           TTATATCAACAGCAACCTCAGAGCTACACCTATTCTTCAAAGCAAAAACAGGTGGAAAAA
JMSF042C19+           TTATATCAACAGCAACCTCAGAGCTACACCTATTCTTCAAAGCAAAAACAGGTGGAAAAA
                      ____________________________________________________________
consensus             TTATATCAACAGCAACCTCAGAGCTACACCTATTCTTCAAAGCAAAAACAGGTGGAAAAA
 
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JMFN040F24+           CTGCCCTTGTTTTGGCTCCATGAATCAGTAATGGAGATTTAAAAGAATTAGAAGAGGGAA
JMSF042C19+           CTGCCCTTGTTTTGGCTCCATGAATCAGTAATGGAGATTTAAAAGAATTAGAAGAGGGAA
                      ____________________________________________________________
consensus             CTGCCCTTGTTTTGGCTCCATGAATCAGTAATGGAGATTTAAAAGAATTAGAAGAGGGAA
 
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JMFN040F24+           TTCTGGGAGAAGATGAAGTTAGCCCAAGAGAAGGAAATGGGTGTTGACCTACACCAAGTA
JMSF042C19+           TTCTGGGAGAAGATGAAGTTAGCCCAAGAGAAGGAAATGGGTGTTGACCTACACCAAGTA
                      ____________________________________________________________
consensus             TTCTGGGAGAAGATGAAGTTAGCCCAAGAGAAGGAAATGGGTGTTGACCTACACCAAGTA
 
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JMFN040F24+           AGGAAGCAGCATTCACCATTAAAGCCATTTTTTTTCAAG                     
JMSF042C19+           AGGAAGCAGCATTCACCATTAAAGCCATTTTTTTTCAAGTATTCTTGGATTATGTCTGTG
                      ____________________________________________________________
consensus             AGGAAGCAGCATTCACCATTAAAGCCATTTTTTTTCAAGTATTCTTGGATTATGTCTGTG
 
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JMSF042C19+           CGCAGAGAGCTCTGGAGTTTGAAGATAGAGTGAGAAAGAAGAAGAAGAAGAGGAAAGGCC
                      ____________________________________________________________
consensus             CGCAGAGAGCTCTGGAGTTTGAAGATAGAGTGAGAAAGAAGAAGAAGAAGAGGAAAGGCC