Contig 013496:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF024D19Sequence456003847 (4)ref|XP_009618898.1|1e-36PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Nicotiana tomentosiform349013496 (5)ref|XP_010106460.1|2e-22Putative E3 ubiquitin-protein ligase XBAT31 [Morus notabilis] gb|EXC10636.1| Put
JMSF032D14Sequence710013496 (5)ref|XP_009618898.1|2e-127PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Nicotiana tomentosiform793005869 (9)ref|XP_009618898.1|9e-39PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Nicotiana tomentosiform
JMSF036L12Sequence709013496 (5)ref|XP_009618898.1|9e-127PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Nicotiana tomentosiform790005869 (9)ref|XP_009618898.1|3e-38PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Nicotiana tomentosiform
JMSF039K20Sequence675013496 (5)ref|XP_009618898.1|1e-108PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Nicotiana tomentosiform301005869 (9)ref|NP_001265923.1|1e-12Hop-interacting protein THI012 [Solanum lycopersicum] gb|AEW69785.1| Hop-interac
JMSF050D14Sequence710013496 (5)ref|XP_009618898.1|1e-126PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Nicotiana tomentosiform812005869 (9)ref|XP_009618898.1|1e-30PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Nicotiana tomentosiform

Alignment

This contig is upended


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rJMSF024D19+                                           CGAAAGAGTGAAAATAGACAATGCTAG
                      ____________________________________________________________
consensus                                              CGAAAGAGTGAAAATAGACAATGCTAG
 
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rJMSF024D19+          AGACAAATATAATCAAGAATCACAAAGATTAGTGCAAAGAGGGAAAGATTAGTACCCAGA
                      ____________________________________________________________
consensus             AGACAAATATAATCAAGAATCACAAAGATTAGTGCAAAGAGGGAAAGATTAGTACCCAGA
 
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rJMSF024D19+          AGCGTCTCGTTGAAGTCGATCTGCACCCCACGCCAACAATTCACGGATACAATCGAGAGA
                      ____________________________________________________________
consensus             AGCGTCTCGTTGAAGTCGATCTGCACCCCACGCCAACAATTCACGGATACAATCGAGAGA
 
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rJMSF024D19+          TCCCCCTCTCGCAGCCAAATGAAGAGGAGTGCTGCCTGGAAAACTGTAACACGAGATTTC
                      ____________________________________________________________
consensus             TCCCCCTCTCGCAGCCAAATGAAGAGGAGTGCTGCCTGGAAAACTGTAACACGAGATTTC
 
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rJMSF024D19+          TCAATCCAAAACTNTAAAGGAAAACTAGGAACCAAAGAACCAAAAAGTTCTCCATATCAT
                      ____________________________________________________________
consensus             TCAATCCAAAACTNTAAAGGAAAACTAGGAACCAAAGAACCAAAAAGTTCTCCATATCAT
 
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rJMSF024D19+          TACCCATAGTTTCCAGTTGATGCACAAACCAAAGCTCCATTGTTCAATAACATATGAACA
JMSF032D14+              CCATAGTTTCCAGTTGATGCACAAACCAAAGCTCCATTGTTCAATAACATATGAACA
JMSF036L12+              CCATAGTTTCCAGTTGATGCACAAACCAAAGCTCCATTGTTCAATAACATATGAACA
JMSF050D14+              CCATAGTTTCCAGTTGATGCACAAACCAAAGCTCCATTGTTCAATAACATATGAACA
JMSF039K20+                                                        AATAACATATGAACA
                      ____________________________________________________________
consensus             TACCCATAGTTTCCAGTTGATGCACAAACCAAAGCTCCATTGTTCAATAACATATGAACA
 
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rJMSF024D19+          CATTCGGGCCGTCTCTGACGAG                                      
JMSF032D14+           CATTCGGGCCGTCTCTGACGAGAAGCCAAGTGCAAAGGTGTTGCCCCCTTACCATCCCTA
JMSF036L12+           CATTCGGGCCGTCTCTGACGAGAAGCCAAGTGCAAAGGTGTTGCCCCCTTACCATCCCTA
JMSF050D14+           CATTCGGGCCGTCTCTGACGAGAAGCCAAGTGCAAAGGTGTTGCCCCCTTACCATCCCTA
JMSF039K20+           CATTCGGGCCGTCTCTGACGAGAAGCCAAGTGCAAAGGTGTTGCCCCCTTACCATCCCTA
                      ____________________________________________________________
consensus             CATTCGGGCCGTCTCTGACGAGAAGCCAAGTGCAAAGGTGTTGCCCCCTTACCATCCCTA
 
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JMSF032D14+           ACATTCACAAATCTGGCATACCCCCAAGAAGCAGCAACATGGGATGTACGAGCCGAAGAG
JMSF036L12+           ACATTCACAAATCTGGCATACCCCCAAGAAGCAGCAACATGGGATGTACGAGCCGAAGAG
JMSF050D14+           ACATTCACAAATCTGGCATACCCCCAAGAAGCAGCAACATGGGATGTACGAGCCGAAGAG
JMSF039K20+           ACATTCACAAATCTGGCATACCCCCAAGAAGCAGCAACATGGGATGTACGAGCCGAAGAG
                      ____________________________________________________________
consensus             ACATTCACAAATCTGGCATACCCCCAAGAAGCAGCAACATGGGATGTACGAGCCGAAGAG
 
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JMSF032D14+           AGAATTGCTTTAAGGCAATCGGAATGGCCATAGTAAGCAGCATAGTGCAAACAAGTTCGC
JMSF036L12+           AGAGTTGCTTTAAGGCAATCGGAATGGCCATAGTAAGCAGCATAGTGCAAACAAGTTCGC
JMSF050D14+           AGAATTGCTTTAAGGCAATCGGAATGGCCATAGTAAGCAGCATAGTGCAAACAAGTTCGC
JMSF039K20+           AGAATTGCTTTAAGGCAATCGGAATGGCCATAGTAAGCAGCATAGTGCAAACAAGTTCGC
                      ____________________________________________________________
consensus             AGAATTGCTTTAAGGCAATCGGAATGGCCATAGTAAGCAGCATAGTGCAAACAAGTTCGC
 
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JMSF032D14+           CCATGAAGTGAATCAAACTTTAATATGTTGGCCCCAGCTTCGATGAGCTTTTGCACACAA
JMSF036L12+           CCATGAAGTGAATCAAACTTTAATATGTTGGCCCCAGCTTCGATGAGCTTTTGCACACAA
JMSF050D14+           CCATGAAGTGAATCAAACTTTAATATGTTGGCCCCAGCTTCGATGAGCTTTTGCACACAA
JMSF039K20+           CCATGAAGTGAATCAAACTTTAATATGTTGGCCCCAGCTTCGATGAGCTTTTGCACACAA
                      ____________________________________________________________
consensus             CCATGAAGTGAATCAAACTTTAATATGTTGGCCCCAGCTTCGATGAGCTTTTGCACACAA
 
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JMSF032D14+           TCGATCTTTCCATGCATTGCAGCCAGCATCAATGGAGTCTGCTTGTGGCGATTCAACAAA
JMSF036L12+           TCGATCTTTCCATGCATTGCAGCCAGCATCAATGGAGTCTGCTTGTGGCGATTCAACAAA
JMSF050D14+           TCGATCTTTCCATGCATTGCAGCCAGCATCAATGGAGTCTGCTTGTGGCGATTCAACAAA
JMSF039K20+           TCGATCTTTCCATGCATTGCAGCCAGCATCAATGGAGTCTGCTTGTGGCGATTCAACAAA
                      ____________________________________________________________
consensus             TCGATCTTTCCATGCATTGCAGCCAGCATCAATGGAGTCTGCTTGTGGCGATTCAACAAA
 
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JMSF032D14+           TCTGGATTAACAGATCGGTTTAAGAGCATAGTAACGACCTCGATCTGGCCATTGGCGGCG
JMSF036L12+           TCTGGATTAACAGATCGGTTTAAGAGCATAGTAACGACCTCGATCTGGCCATTGGCGGCG
JMSF050D14+           TCTGGATTAACAGATCGGTTTAAGAGCATAGTAACGACCTCGATCTGGCCATTGGCGGCG
JMSF039K20+           TCTGGATTAACAGATCGGTTTAAGAGCATAGTAACGACCTCGATCTGGCCATTGGCGGCG
                      ____________________________________________________________
consensus             TCTGGATTAACAGATCGGTTTAAGAGCATAGTAACGACCTCGATCTGGCCATTGGCGGCG
 
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JMSF032D14+           GCTATATGCAAAGCGGAGTGGCGATCATACACCGTGGTGTGGTGGATGAGACCTGGCTCT
JMSF036L12+           GCTATATGCAAAGCGGAGTGGCGATCATACACCGTGGTGTGGTGGATGAGACCTGGCTCT
JMSF050D14+           GCTATATGCAAAGCGGAGTGGCGATCATACACCGTGGTGTGGTGGATGAGACCTGGCTCT
JMSF039K20+           GCTATATGCAAAGCGGAGTGGCGATCATACACCGTGGTGTGGTGGATGAGACCTGGCTCT
                      ____________________________________________________________
consensus             GCTATATGCAAAGCGGAGTGGCGATCATACACCGTGGTGTGGTGGATGAGACCTGGCTCT
 
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JMSF032D14+           CTCCCCAACACCGTCTCCACCGTCTCCACATCTCCACACTGCACGGCGGTGAACAGCCCG
JMSF036L12+           CTCCCCAACACCGTCTCCACCGTCTCCACATCTCCACACTGCACGGCGGTGAACAGCCCG
JMSF050D14+           CTCCCCAACACCGTCTCCACCGTCTCCACATCTCCACACTGCACGGCGGTGAACAGCCCG
JMSF039K20+           CTCCCCAACACCGTCTCCACCGTCTCCACATCTCCACACTGCACGGCGGTGAACAGCCCG
                      ____________________________________________________________
consensus             CTCCCCAACACCGTCTCCACCGTCTCCACATCTCCACACTGCACGGCGGTGAACAGCCCG
 
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JMSF032D14+           TGCTCATCACTCGTTCTGCAACTCAGCCCCTGACCCATTCCTAAAGCTGCGATCTTTTTT
JMSF036L12+           TGCTCATCACTCGTTCTGCAACTCAGCCCCTGACCCATTCCTAAAGCTGCGATCTTTTTT
JMSF050D14+           TGCTCATCACTCGTTCTGCAACTCAGCCCCTGACCCATTCCTAAAGCTGCGATCTTTTTT
JMSF039K20+           TGCTCATCACTCGTTCTGCAACTCAGCCCCTGACCCATTCCTAAAGCTGCGATCTTTTTT
                      ____________________________________________________________
consensus             TGCTCATCACTCGTTCTGCAACTCAGCCCCTGACCCATTCCTAAAGCTGCGATCTTTTTT
 
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JMSF032D14+           CACGGTGGGGGGAGATGAAGCCCAGAAGAGGAGGCACCCCTGCACCACGGCGGCTTGGGC
JMSF036L12+           CACGGTGGGGGGAGATGAAGCCCAGAAGAGGAGGCACCCCTGCACCACGGCGGCTTGGGC
JMSF050D14+           CACGGTGGGGGGAGATGAAGCCCAGAAGAGGAGGCACCCCTGCACCACGGCGGCTTGGGC
JMSF039K20+           CACGGTGGGGGGAGATGAAGCCCAGAAGAGGAGGCACCCCTGCACCACGGCGGCTTGGGC
                      ____________________________________________________________
consensus             CACGGTGGGGGGAGATGAAGCCCAGAAGAGGAGGCACCCCTGCACCACGGCGGCTTGGGC
 
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JMSF032D14+           AGAGGGGAGTGGTGGC                                            
JMSF036L12+           AGAGGGGAGTGGTGG                                             
JMSF050D14+           AGAGGGGAGTGGTGGC                                            
JMSF039K20+           AGAGGGGAGTGGTGGCGGAATTGGAAAGTGTGAGCTCCTACATATTTAATGCCGGTTACC
                      ____________________________________________________________
consensus             AGAGGGGAGTGGTGGCGGAATTGGAAAGTGTGAGCTCCTACATATTTAATGCCGGTTACC