| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF005N22 | Sequence | 524 | 013494 (7) | ref|XP_009616336.1| | 4e-63 | PREDICTED: putative phagocytic receptor 1b [Nicotiana tomentosiformis] | 711 | 001345 (7) | gb|KJB15314.1| | 2e-103 | hypothetical protein B456_002G170500 [Gossypium raimondii] |
| JMFF007B07 | Sequence | 529 | 013494 (7) | ref|XP_009616336.1| | 7e-65 | PREDICTED: putative phagocytic receptor 1b [Nicotiana tomentosiformis] | 571 | 001345 (7) | gb|KJB15315.1| | 7e-67 | hypothetical protein B456_002G170500 [Gossypium raimondii] |
| JMFF019C06 | Sequence | 570 | 013494 (7) | ref|XP_009616336.1| | 1e-64 | PREDICTED: putative phagocytic receptor 1b [Nicotiana tomentosiformis] | 753 | 001345 (7) | gb|KJB15314.1| | 1e-93 | hypothetical protein B456_002G170500 [Gossypium raimondii] |
| JMFF034O08 | Sequence | 137 | 013494 (7) | 637 | 001345 (7) | gb|KJB15314.1| | 2e-68 | hypothetical protein B456_002G170500 [Gossypium raimondii] | |||
| JMFS037G04 | Sequence | 576 | 013494 (7) | ref|XP_009774478.1| | 4e-78 | PREDICTED: putative phagocytic receptor 1b [Nicotiana sylvestris] | |||||
| JMSF010C05 | Sequence | 309 | 013494 (7) | ref|XP_008461818.1| | 5e-40 | PREDICTED: putative phagocytic receptor 1b isoform X1 [Cucumis melo] | 728 | 001345 (7) | gb|KJB15314.1| | 2e-83 | hypothetical protein B456_002G170500 [Gossypium raimondii] |
| JMSF039J07 | Sequence | 680 | 013494 (7) | ref|XP_009775043.1| | 6e-87 | PREDICTED: putative phagocytic receptor 1b [Nicotiana sylvestris] | 846 | 001345 (7) | gb|KJB15314.1| | 1e-117 | hypothetical protein B456_002G170500 [Gossypium raimondii] |
This contig is upended
. : . : . : . : . : . :
JMFS037G04+ AGGGCACTAG
____________________________________________________________
consensus AGGGCACTAG
. : . : . : . : . : . :
JMFS037G04+ GATCAGTTCGCGCATTAATCTCAATCACACGATCCTTGTTGTAAAAGATCTCAAAGTGAA
JMSF039J07+ GTAAAAGATCTCAAAGTGAA
____________________________________________________________
consensus GATCAGTTCGCGCATTAATCTCAATCACACGATCCTTGTTGTAAAAGATCTCAAAGTGAA
. : . : . : . : . : . :
JMFS037G04+ GATGCTTGAATAGGTAGTATTT-AATTCACTAGGATCAGATTTTCCATCCTTATCAACTT
JMSF039J07+ GATGCTTGAATAGGTAGTATTTGAATTCACTAGGATCAGATTTTCCATCCTTATCAACTT
____________________________________________________________
consensus GATGCTTGAATAGGTAGTATTTGAATTCACTAGGATCAGATTTTCCATCCTTATCAACTT
. : . : . : . : . : . :
JMFS037G04+ TCCCAAGGAAACCCCAAATAGGCAGGTCATCATAGTACATTTGGAAATAGTAATCCTTCG
JMFF005N22+ GCAGGTCATCATAGTACATTTGGAAATAGTAATCCTTCG
JMFF007B07+ GGCAGGTCATCATAGTACATTTGGAAATAGTAATCCTTNG
JMFF019C06+ GGCAGGTCATCATAGTACATTTGGAAATAGTAATCCTTCG
JMSF039J07+ TCCCAAGGAAACCCCAAATAGGCAGGTCATCATAGTACATTTGGAAATAGTAATCCTTCG
____________________________________________________________
consensus TCCCAAGGAAACCCCAAATAGGCAGGTCATCATAGTACATTTGGAAATAGTAATCCTTCG
. : . : . : . : . : . :
JMFS037G04+ AAACAGCTTCACGGAACTGTGCAACTTCTTTCTGTGATAGTTTCTTCTTGCACACACTTT
JMFF005N22+ AAACAGCTTCACGGAACTGTGCAACTTCTTTCTGTGATAGTTTCTTCTTGCACACACTTT
JMFF007B07+ AAACAGCTTCACGGAACTGTGCAACTTCTTTCTGTGATAGTTTCTTCTTGCACACACTTT
JMFF019C06+ AAACAGCTTCACGGAACTGTGCAACTTCTTTCTGTGATAGTTTCTTCTTGCACACACTTT
JMSF039J07+ AAACAGCTTCACGGAACTGTGCAACTTCTTTCTGTGATAGTTTCTTCTTGCACACACTTT
____________________________________________________________
consensus AAACAGCTTCACGGAACTGTGCAACTTCTTTCTGTGATAGTTTCTTCTTGCACACACTTT
. : . : . : . : . : . :
JMFS037G04+ CAGAGTCCTTATCATACATAAAATCAAGCTTGTAGGGTGCACTGACCAACCGGTCACCAT
JMSF010C05+ AATCAAGCTTGTAGGGTGCACTGACCAACCGGTCACCAT
JMFF005N22+ CAGAGTCCTTATCATACATAAAATCAAGCTTGTAGGGTGCACTGACCAACCGGTCACCAT
JMFF007B07+ CAGAGTCCTTATCATACATAAAATCAAGCTTGTAGGGTGCACTGACCAACCGGTCACCAT
JMFF019C06+ CAGAGTCCTTATCATACATAAAATCAAGCTTGTAGGGTGCACTGACCAACCGGTCACCAT
JMSF039J07+ CAGAGTCCTTATCATACATAAAATCAAGCTTGTAGGGTGCACTGACCAACCGGTCACCAT
____________________________________________________________
consensus CAGAGTCCTTATCATACATAAAATCAAGCTTGTAGGGTGCACTGACCAACCGGTCACCAT
. : . : . : . : . : . :
JMFS037G04+ TTAAGACTTCACCAAGGGCTTCCTTTTTCTCTTTCACATCATCTGTTAGGCAGAATGGAA
JMSF010C05+ TTAAGACTTCACCAAGGGCTTCCTTTTTCTCTTTCACATCATCTGTTAGGCAGAATGGAA
JMFF005N22+ TTAAGACTTCACCAAGGGCTTCCTTTTTCTCTTTCACATCATCTGTTAGGCAGAATGGAA
JMFF007B07+ TTAAGACTTCACCAAGGGCTTCCTTTTTCTCTTTCACATCATCTGTTAGGCAGAATGGAA
JMFF019C06+ TTAAGACTTCACCAAGGGCTTCCTTTTTCTCTTTCACATCATCTGTTAGGCAGAATGGAA
JMSF039J07+ TTAAGACTTCACCAAGGGCTTCCTTTTTCTCTTTCACATCATCTGTTAGGCAGAATGGAA
____________________________________________________________
consensus TTAAGACTTCACCAAGGGCTTCCTTTTTCTCTTTCACATCATCTGTTAGGCAGAATGGAA
. : . : . : . : . : . :
JMFS037G04+ GATCAAAGTAACGGTATGTTTCACTCGGATTGTGAAAAGGCCCGACCTTGTTGGCGTACA
JMSF010C05+ GATCAAAGTAACGGTATGTTTCACTCGGATTGTGAAAAGGCCCGACCTTGTTGGCGTACA
JMFF005N22+ GATCAAAGTAACGGTATGTTTCACTCGGATTGTGAAAAGGCCCGACCTTGTTGGCGTACA
JMFF007B07+ GATCAAAGTAACGGTATGTTTCACTCGGATTGTGAAAAGGCCCGACCTTGTTGGCGTACA
JMFF019C06+ GATCAAAGTAACGGTATGTTTCACTCGGATTGTGAAAAGGCCCGACCTTGTTGGCGTACA
JMSF039J07+ GATCAAAGTAACGGTATGTTTCACTCGGATTGTGAAAAGGCCCGACCTTGTTGGCGTACA
____________________________________________________________
consensus GATCAAAGTAACGGTATGTTTCACTCGGATTGTGAAAAGGCCCGACCTTGTTGGCGTACA
. : . : . : . : . : . :
JMFS037G04+ GAGGGACTGCATCTCCGGCCTTGTACTTGTGATCCGATCCATCCGATCTCACCGGCGCCG
JMSF010C05+ GAGGGACTGCATCTCCGGCCTTGTACTTGTGATCCGATCCATCCGATCTCACCGGCGCCG
JMFF005N22+ GAGGGACTGCATCTCCGGCCTTGTACTTGTGATCCGATCCATCCGATCTCACCGGCGCCG
JMFF007B07+ GAGGGACTGCATCTCCGGCCTTGTACTTGTGATCCGATCCATCCGATCTCACCGGCGCCG
JMFF019C06+ GAGGGACTGCATCTCCGGCCTTGTACTTGTGATCCGATCCATCCGATCTCACCGGCGCCG
JMSF039J07+ GAGGGACTGCATCTCCGGCCTTGTACTTGTGATCCGATCCATCCGATCTCACCGGCGCCG
____________________________________________________________
consensus GAGGGACTGCATCTCCGGCCTTGTACTTGTGATCCGATCCATCCGATCTCACCGGCGCCG
. : . : . : . : . : . :
JMFS037G04+ CGCAGCAGACCACGAGCAGAACGGCGACGAACCGCGCCACCGCCCTCTTCTTCCCCATTT
JMSF010C05+ CGCAGCAGACCACGAGCAGAACGGCGACGAACCGCGCCACCGCCCTCTTCTTCCCCATTT
JMFF034O08+ CGCCCTCTTCTTCCCCATTT
JMFF005N22+ CGCAGCAGACCACGAGCAGAACGGCGACGAACCGCGCCACCGCCCTCTTCTTCCCCATTT
JMFF007B07+ CGCAGCAGACCACGAGCAGAACGGCGACGAACCGCGCCACCGCCCTCTTCTTCCCCATTT
JMFF019C06+ CGCAGCAGACCACGAGCAGAACGGCGACGAACCGCGCCACCGCCCTCTTCTTCCCCATTT
JMSF039J07+ CGCAGCAGACCACGAGCAGAACGGCGACGAACCGCGCCACCGCCCTCTTCTTCCCCATTT
____________________________________________________________
consensus CGCAGCAGACCACGAGCAGAACGGCGACGAACCGCGCCACCGCCCTCTTCTTCCCCATTT
. : . : . : . : . : . :
JMFS037G04+ CCCTCATTTCCAATCACCCGTACCTAT
JMSF010C05+ CCCTCATTTCCAATCACCCGTACCTATGT
JMFF034O08+ CCCTCATTTCCAATCACCCGTACCTATGTATGAGCGTGTATATCTATCTATTCTATATAT
JMFF005N22+ CCCTCATTTCCAATCACCCGTACCTATGTATGAGCGTGTATATCTATCTATTCTATATAT
JMFF007B07+ CCCTCATTTCCAATCACCCGTACCTATGTATGAGCGTGTATATCTATCTATTCTATATAT
JMFF019C06+ CCCTCATTTCCAATCACCCGTACCTATGTATGAGCGTGTATATCTATCTATTCTATATAT
JMSF039J07+ CCCTCATTTCCAATCACCCGTACCTATGTATGAGCGTGTATATCTATCTATTCTATATAT
____________________________________________________________
consensus CCCTCATTTCCAATCACCCGTACCTATGTATGAGCGTGTATATCTATCTATTCTATATAT
. : . : . : . : . : . :
JMFF034O08+ ATATAAGAATATACTGAGATCAAGAGAGAGAAAGCGAGAGAGAGAGGGGTGAAAGCA
JMFF005N22+ ATATAAGAATATACTGAGATCAAGAGAGAGAAAGCGAGAGAGAGAGGGGTGAAAGCACAG
JMFF007B07+ ATATAAGAATATACTGAGATCAAGAGAGAGAAAGCGAGAGAGAGAGGGGTGAAAGCACAG
JMFF019C06+ ATATAAGAATATACTGAGATCAAGAGAGAGAAAGCGAGAGAGAGAGGGGTGAAAGCACAG
JMSF039J07+ ATATAAGAATATACTGAGATCAAGAGAGAGAAAGCGAGAGAGAGAGGGGTGAAAGCACAG
____________________________________________________________
consensus ATATAAGAATATACTGAGATCAAGAGAGAGAAAGCGAGAGAGAGAGGGGTGAAAGCACAG
. : . : . : . : . : . :
JMFF005N22+ ATCTC
JMFF007B07+ ATCTC
JMFF019C06+ ATCTCGATCTCCCCGGCAAAGGGGCGCAATTTAACT
JMSF039J07+ ATCTCGATCTCCCCGGCAAAGGGGCGCAATTTAACTGCGAAGAGTCTGAAATGAAACGCC
____________________________________________________________
consensus ATCTCGATCTCCCCGGCAAAGGGGCGCAATTTAACTGCGAAGAGTCTGAAATGAAACGCC