Contig 013491:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF039G01Sequence650013491 (2)ref|XP_004237470.1|178PREDICTED: uncharacterized protein LOC101259237 [Solanum lycopersicum]892013491 (2)ref|XP_006367386.1|1e-119PREDICTED: uncharacterized protein LOC102593671 isoform X1 [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF039G01-                                 ATTTGATGATTACATCAACGTCTTCATAAATATTTGG
                      ____________________________________________________________
consensus                                    ATTTGATGATTACATCAACGTCTTCATAAATATTTGG
 
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rJMSF039G01-          CCAAACTAGAACGAAGTATGTGCAGGCCTAGGCCTAGCCTAGCTTAGCTTAGATGTGGTT
                      ____________________________________________________________
consensus             CCAAACTAGAACGAAGTATGTGCAGGCCTAGGCCTAGCCTAGCTTAGCTTAGATGTGGTT
 
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rJMSF039G01-          GTGGTGGGCGTTTTTAGGATGTTTTGTGAGCCACACTACACTATGCAATATGCAATATGC
                      ____________________________________________________________
consensus             GTGGTGGGCGTTTTTAGGATGTTTTGTGAGCCACACTACACTATGCAATATGCAATATGC
 
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rJMSF039G01-          ATAGCCTCTGATCTGAGTTCAGAGCTCCGTGCTGATCCATGTAGAAAACAAAGTTGTAGT
                      ____________________________________________________________
consensus             ATAGCCTCTGATCTGAGTTCAGAGCTCCGTGCTGATCCATGTAGAAAACAAAGTTGTAGT
 
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rJMSF039G01-          TATTAGGAAGGAAGCTTCAACTTTTATATGAATATGAATATTCAGCCTTGAATTCTTTCT
                      ____________________________________________________________
consensus             TATTAGGAAGGAAGCTTCAACTTTTATATGAATATGAATATTCAGCCTTGAATTCTTTCT
 
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rJMSF039G01-          CGAGCTGTTCCTTAGATTCAGTTTTTGCAGCCAACATTACATCATCAAGGAACCCTCTCC
                      ____________________________________________________________
consensus             CGAGCTGTTCCTTAGATTCAGTTTTTGCAGCCAACATTACATCATCAAGGAACCCTCTCC
 
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rJMSF039G01-          CAGGAAACTCTTCGGGTACGAGATTGCAGTATATCTCAAACTGCTCTTCAGCTTCCTTCT
                      ____________________________________________________________
consensus             CAGGAAACTCTTCGGGTACGAGATTGCAGTATATCTCAAACTGCTCTTCAGCTTCCTTCT
 
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rJMSF039G01-          TTTTGTCAAGGAGACTGTATACAATTCCCTGGCACAAATAAGGGCGAAAATCTCTTGGGT
                      ____________________________________________________________
consensus             TTTTGTCAAGGAGACTGTATACAATTCCCTGGCACAAATAAGGGCGAAAATCTCTTGGGT
 
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rJMSF039G01-          TCTCTTGAACAAGAATTTGAAACTTCTCCAAAGCCTCCTCTAACTCTCCCTTTACAAGAT
                      ____________________________________________________________
consensus             TCTCTTGAACAAGAATTTGAAACTTCTCCAAAGCCTCCTCTAACTCTCCCTTTACAAGAT
 
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rJMSF039G01-          GCATCTGTGCAATCAATATCTTTATATTCCTCTCCTTATTAACCTTTTTTTCTCGATGAG
                      ____________________________________________________________
consensus             GCATCTGTGCAATCAATATCTTTATATTCCTCTCCTTATTAACCTTTTTTTCTCGATGAG
 
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rJMSF039G01-          CAACTTCTAGAGCACCATTCAGCATCTCAAATACAGCAGGACCTTCAAGGTTCTTGTGCA
                      ____________________________________________________________
consensus             CAACTTCTAGAGCACCATTCAGCATCTCAAATACAGCAGGACCTTCAAGGTTCTTGTGCA
 
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rJMSF039G01-          TAACCATTGCTAGACCGTGCAATGCTCTAAGCAATAGAGGTTCTTGCTTCAATATTTGCT
                      ____________________________________________________________
consensus             TAACCATTGCTAGACCGTGCAATGCTCTAAGCAATAGAGGTTCTTGCTTCAATATTTGCT
 
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rJMSF039G01-          TAAACAATCTCTTAGCCTTGGTTAATTGCCCCATTATCTCATAGCAAAAAGCCTGCAACA
JMSF039G01+                     CTTAGCCTTGGTTAATTGCCCCATTATCTCATAGCAAAAAGCCTGCAACA
                      ____________________________________________________________
consensus             TAAACAATCTCTTAGCCTTGGTTAATTGCCCCATTATCTCATAGCAAAAAGCCTGCAACA
 
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rJMSF039G01-          GTCTCCACTCAACTTCTCTAGGTTGAACCTCAATCAACCTCTCCACATACTTAACAGCCT
JMSF039G01+           GTCTCCACTCAACTTCTCTAGGTTGAACCTCAATCAACCTCTCCACATACTTAACAGCCT
                      ____________________________________________________________
consensus             GTCTCCACTCAACTTCTCTAGGTTGAACCTCAATCAACCTCTCCACATACTTAACAGCCT
 
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rJMSF039G01-          CCTTCGTCTTCCCTTTCTTCATCATCACATTAACAATCATCTTCAGAGCCTCCACATCTC
JMSF039G01+           CCTTCGTCTTCCCTTTCTTCATCATCACATTAACAATCATCTTCAGAGCCTCCACATCTC
                      ____________________________________________________________
consensus             CCTTCGTCTTCCCTTTCTTCATCATCACATTAACAATCATCTTCAGAGCCTCCACATCTC
 
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rJMSF039G01-          TGGGGTTCTTCTCCA                                             
JMSF039G01+           TGGGGTTCTTCTCCAGCAGCTTCACATATATCATCTCCTCACTTCCACCACTCTGGGCCT
                      ____________________________________________________________
consensus             TGGGGTTCTTCTCCAGCAGCTTCACATATATCATCTCCTCACTTCCACCACTCTGGGCCT
 
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JMSF039G01+           CCGCCTCAACCCCACTACTTTCTTGAACCGGCTGCGCCACCGCTGCCCAAACCCTTAAAC
                      ____________________________________________________________
consensus             CCGCCTCAACCCCACTACTTTCTTGAACCGGCTGCGCCACCGCTGCCCAAACCCTTAAAC
 
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JMSF039G01+           CCCCCAAAAAAACGAATGACCCAAGAGCCAAAATCACTAATTTCTCACTGATAAACTTGG
                      ____________________________________________________________
consensus             CCCCCAAAAAAACGAATGACCCAAGAGCCAAAATCACTAATTTCTCACTGATAAACTTGG
 
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JMSF039G01+           AAATCCTCTTCTCTGGAGTTAAATTTAGTGCAGATTTTGATTTTGATGTGGGTATTGCTG
                      ____________________________________________________________
consensus             AAATCCTCTTCTCTGGAGTTAAATTTAGTGCAGATTTTGATTTTGATGTGGGTATTGCTG
 
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JMSF039G01+           AGTAGCGAAGGGTTTTGGGGGTGCGGACAGGGTTGAGGAGGGAGAAGGGTTTTAGAGAAT
                      ____________________________________________________________
consensus             AGTAGCGAAGGGTTTTGGGGGTGCGGACAGGGTTGAGGAGGGAGAAGGGTTTTAGAGAAT
 
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JMSF039G01+           TTTGGAAAATGGGGAAGGAGAAACTTCGATTTTGATTGAGGTTTGAATGAAGATAGAGGG
                      ____________________________________________________________
consensus             TTTGGAAAATGGGGAAGGAGAAACTTCGATTTTGATTGAGGTTTGAATGAAGATAGAGGG
 
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JMSF039G01+           GCAATCTAGTGATGGACGAAGAACCCATTCTTGAATTTGAAAATCCAAGTAGAAACAGCC
                      ____________________________________________________________
consensus             GCAATCTAGTGATGGACGAAGAACCCATTCTTGAATTTGAAAATCCAAGTAGAAACAGCC
 
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JMSF039G01+           GCAGAAAGAGAAGGGTTTTAGAGAATTTTGGAAAATGGGGAAGGAGAAACTTCGATACTC
                      ____________________________________________________________
consensus             GCAGAAAGAGAAGGGTTTTAGAGAATTTTGGAAAATGGGGAAGGAGAAACTTCGATACTC