Contig 013491:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF039G01Sequence650013491 (2)ref|XP_004237470.1|178PREDICTED: uncharacterized protein LOC101259237 [Solanum lycopersicum]892013491 (2)ref|XP_006367386.1|1e-119PREDICTED: uncharacterized protein LOC102593671 isoform X1 [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF039G01- ATTTGATGATTACATCAACGTCTTCATAAATATTTGG
                      ____________________________________________________________
consensus ATTTGATGATTACATCAACGTCTTCATAAATATTTGG
 
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rJMSF039G01- CCAAACTAGAACGAAGTATGTGCAGGCCTAGGCCTAGCCTAGCTTAGCTTAGATGTGGTT
                      ____________________________________________________________
consensus CCAAACTAGAACGAAGTATGTGCAGGCCTAGGCCTAGCCTAGCTTAGCTTAGATGTGGTT
 
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rJMSF039G01- GTGGTGGGCGTTTTTAGGATGTTTTGTGAGCCACACTACACTATGCAATATGCAATATGC
                      ____________________________________________________________
consensus GTGGTGGGCGTTTTTAGGATGTTTTGTGAGCCACACTACACTATGCAATATGCAATATGC
 
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rJMSF039G01- ATAGCCTCTGATCTGAGTTCAGAGCTCCGTGCTGATCCATGTAGAAAACAAAGTTGTAGT
                      ____________________________________________________________
consensus ATAGCCTCTGATCTGAGTTCAGAGCTCCGTGCTGATCCATGTAGAAAACAAAGTTGTAGT
 
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rJMSF039G01- TATTAGGAAGGAAGCTTCAACTTTTATATGAATATGAATATTCAGCCTTGAATTCTTTCT
                      ____________________________________________________________
consensus TATTAGGAAGGAAGCTTCAACTTTTATATGAATATGAATATTCAGCCTTGAATTCTTTCT
 
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rJMSF039G01- CGAGCTGTTCCTTAGATTCAGTTTTTGCAGCCAACATTACATCATCAAGGAACCCTCTCC
                      ____________________________________________________________
consensus CGAGCTGTTCCTTAGATTCAGTTTTTGCAGCCAACATTACATCATCAAGGAACCCTCTCC
 
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rJMSF039G01- CAGGAAACTCTTCGGGTACGAGATTGCAGTATATCTCAAACTGCTCTTCAGCTTCCTTCT
                      ____________________________________________________________
consensus CAGGAAACTCTTCGGGTACGAGATTGCAGTATATCTCAAACTGCTCTTCAGCTTCCTTCT
 
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rJMSF039G01- TTTTGTCAAGGAGACTGTATACAATTCCCTGGCACAAATAAGGGCGAAAATCTCTTGGGT
                      ____________________________________________________________
consensus TTTTGTCAAGGAGACTGTATACAATTCCCTGGCACAAATAAGGGCGAAAATCTCTTGGGT
 
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rJMSF039G01- TCTCTTGAACAAGAATTTGAAACTTCTCCAAAGCCTCCTCTAACTCTCCCTTTACAAGAT
                      ____________________________________________________________
consensus TCTCTTGAACAAGAATTTGAAACTTCTCCAAAGCCTCCTCTAACTCTCCCTTTACAAGAT
 
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rJMSF039G01- GCATCTGTGCAATCAATATCTTTATATTCCTCTCCTTATTAACCTTTTTTTCTCGATGAG
                      ____________________________________________________________
consensus GCATCTGTGCAATCAATATCTTTATATTCCTCTCCTTATTAACCTTTTTTTCTCGATGAG
 
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rJMSF039G01- CAACTTCTAGAGCACCATTCAGCATCTCAAATACAGCAGGACCTTCAAGGTTCTTGTGCA
                      ____________________________________________________________
consensus CAACTTCTAGAGCACCATTCAGCATCTCAAATACAGCAGGACCTTCAAGGTTCTTGTGCA
 
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rJMSF039G01- TAACCATTGCTAGACCGTGCAATGCTCTAAGCAATAGAGGTTCTTGCTTCAATATTTGCT
                      ____________________________________________________________
consensus TAACCATTGCTAGACCGTGCAATGCTCTAAGCAATAGAGGTTCTTGCTTCAATATTTGCT
 
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rJMSF039G01- TAAACAATCTCTTAGCCTTGGTTAATTGCCCCATTATCTCATAGCAAAAAGCCTGCAACA
JMSF039G01+ CTTAGCCTTGGTTAATTGCCCCATTATCTCATAGCAAAAAGCCTGCAACA
                      ____________________________________________________________
consensus TAAACAATCTCTTAGCCTTGGTTAATTGCCCCATTATCTCATAGCAAAAAGCCTGCAACA
 
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rJMSF039G01- GTCTCCACTCAACTTCTCTAGGTTGAACCTCAATCAACCTCTCCACATACTTAACAGCCT
JMSF039G01+ GTCTCCACTCAACTTCTCTAGGTTGAACCTCAATCAACCTCTCCACATACTTAACAGCCT
                      ____________________________________________________________
consensus GTCTCCACTCAACTTCTCTAGGTTGAACCTCAATCAACCTCTCCACATACTTAACAGCCT
 
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rJMSF039G01- CCTTCGTCTTCCCTTTCTTCATCATCACATTAACAATCATCTTCAGAGCCTCCACATCTC
JMSF039G01+ CCTTCGTCTTCCCTTTCTTCATCATCACATTAACAATCATCTTCAGAGCCTCCACATCTC
                      ____________________________________________________________
consensus CCTTCGTCTTCCCTTTCTTCATCATCACATTAACAATCATCTTCAGAGCCTCCACATCTC
 
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rJMSF039G01- TGGGGTTCTTCTCCA
JMSF039G01+ TGGGGTTCTTCTCCAGCAGCTTCACATATATCATCTCCTCACTTCCACCACTCTGGGCCT
                      ____________________________________________________________
consensus TGGGGTTCTTCTCCAGCAGCTTCACATATATCATCTCCTCACTTCCACCACTCTGGGCCT
 
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JMSF039G01+ CCGCCTCAACCCCACTACTTTCTTGAACCGGCTGCGCCACCGCTGCCCAAACCCTTAAAC
                      ____________________________________________________________
consensus CCGCCTCAACCCCACTACTTTCTTGAACCGGCTGCGCCACCGCTGCCCAAACCCTTAAAC
 
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JMSF039G01+ CCCCCAAAAAAACGAATGACCCAAGAGCCAAAATCACTAATTTCTCACTGATAAACTTGG
                      ____________________________________________________________
consensus CCCCCAAAAAAACGAATGACCCAAGAGCCAAAATCACTAATTTCTCACTGATAAACTTGG
 
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JMSF039G01+ AAATCCTCTTCTCTGGAGTTAAATTTAGTGCAGATTTTGATTTTGATGTGGGTATTGCTG
                      ____________________________________________________________
consensus AAATCCTCTTCTCTGGAGTTAAATTTAGTGCAGATTTTGATTTTGATGTGGGTATTGCTG
 
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JMSF039G01+ AGTAGCGAAGGGTTTTGGGGGTGCGGACAGGGTTGAGGAGGGAGAAGGGTTTTAGAGAAT
                      ____________________________________________________________
consensus AGTAGCGAAGGGTTTTGGGGGTGCGGACAGGGTTGAGGAGGGAGAAGGGTTTTAGAGAAT
 
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JMSF039G01+ TTTGGAAAATGGGGAAGGAGAAACTTCGATTTTGATTGAGGTTTGAATGAAGATAGAGGG
                      ____________________________________________________________
consensus TTTGGAAAATGGGGAAGGAGAAACTTCGATTTTGATTGAGGTTTGAATGAAGATAGAGGG
 
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JMSF039G01+ GCAATCTAGTGATGGACGAAGAACCCATTCTTGAATTTGAAAATCCAAGTAGAAACAGCC
                      ____________________________________________________________
consensus GCAATCTAGTGATGGACGAAGAACCCATTCTTGAATTTGAAAATCCAAGTAGAAACAGCC
 
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JMSF039G01+ GCAGAAAGAGAAGGGTTTTAGAGAATTTTGGAAAATGGGGAAGGAGAAACTTCGATACTC
                      ____________________________________________________________
consensus GCAGAAAGAGAAGGGTTTTAGAGAATTTTGGAAAATGGGGAAGGAGAAACTTCGATACTC