| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS046A01 | Sequence | 598 | 013488 (8) | ||||||||
| JMFS064A06 | Sequence | 619 | 013488 (8) | ref|XP_006346205.1| | 133 | PREDICTED: uncharacterized protein LOC102606294 [Solanum tuberosum] | |||||
| JMFS071F01 | Sequence | 615 | 013488 (8) | ref|XP_006346205.1| | 119 | PREDICTED: uncharacterized protein LOC102606294 [Solanum tuberosum] | |||||
| JMFS075B07 | Sequence | 642 | 013488 (8) | ref|XP_009789367.1| | 154 | PREDICTED: uncharacterized protein LOC104237008 [Nicotiana sylvestris] | |||||
| JMFS099F10 | Sequence | 619 | 013488 (8) | ref|XP_004244107.1| | 135 | PREDICTED: uncharacterized protein LOC101245078 [Solanum lycopersicum] | |||||
| JMFS162C11 | Sequence | 504 | 013488 (8) | ref|XP_006346205.1| | 48.9 | PREDICTED: uncharacterized protein LOC102606294 [Solanum tuberosum] | |||||
| JMFS167D05 | Sequence | 626 | 013488 (8) | ref|XP_006346205.1| | 135 | PREDICTED: uncharacterized protein LOC102606294 [Solanum tuberosum] | |||||
| JMSF039D05 | Sequence | 651 | 013488 (8) | ref|XP_006346205.1| | 86.7 | PREDICTED: uncharacterized protein LOC102606294 [Solanum tuberosum] | 865 | 000384 (4) | ref|XP_009606070.1| | 180 | PREDICTED: uncharacterized protein LOC104100523 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMFS075B07+ AACCT
____________________________________________________________
consensus AACCT
. : . : . : . : . : . :
JMFS075B07+ TGCATACGATCCATTTCTCAGTTTGTTCCTCACAGTTGCAAAGTCCATTGGATGTTTAAT
JMFS064A06+ TCCATTGGATGTTTAAT
____________________________________________________________
consensus TGCATACGATCCATTTCTCAGTTTGTTCCTCACAGTTGCAAAGTCCATTGGATGTTTAAT
. : . : . : . : . : . :
JMFS075B07+ CACATCATGGTAATCAGGAAGCTCTTCAGGATCAACCGGTTCCGCATACACACCATAAAT
JMFS064A06+ CACATCATGGTAATCAGGAAGCTCTTCAGGATCAACCGGTTCCGCATACACACCATAAAT
JMFS099F10+ TCATGGTAATCAGGAAGCTCTTCAGGATCAACCGGTTCCGCATACACACCATAAAT
JMFS167D05+ TCATGGTAATCAGGAAGCTCTTCAGGATCAACCGGTTCCGCATACACACCATAAAT
JMFS071F01+ TCAGGATCAACCGGTTCCGCATACACACCATAAAT
____________________________________________________________
consensus CACATCATGGTAATCAGGAAGCTCTTCAGGATCAACCGGTTCCGCATACACACCATAAAT
. : . : . : . : . : . :
JMFS075B07+ ATCTTTCTTCTGAAGCTTGTCGAGAATCAATTCTAGCGTCTTCTTATCCGGCAACGGAAC
JMFS064A06+ ATCTTTCTTCTGAAGCTTGTCGAGAATCAATTCTAGCGTCTTCTTATCCGGCAACGGAAC
JMFS099F10+ ATCTTTCTTCTGAAGCTTGTCGAGAATCAATTCTAGCGTCTTCTTATCCGGCAACGGAAC
JMFS167D05+ ATCTTTCTTCTGAAGCTTGTCGAGAATCAATTCTAGCGTCTTCTTATCCGGCAACGGAAC
JMFS071F01+ ATCTTTCTTCTGAAGCTTGTCGAGAATCAATTCTAGCGTCTTCTTATCCGGCAACGGAAC
JMFS046A01+ TCCGGCAACGGAAC
JMSF039D05+ TCTGAAGCTNGTCGAGAATCAATTCTAGCGTCTTCTTATCCGGCAACGGAAC
____________________________________________________________
consensus ATCTTTCTTCTGAAGCTTGTCGAGAATCAATTCTAGCGTCTTCTTATCCGGCAACGGAAC
. : . : . : . : . : . :
JMFS075B07+ CCCAGCCGGCCGCTCCGACGGCGTCCCTGGAGAAGATTCAACGCCTCTGGACTCTGCTTT
JMFS064A06+ CCCAGCCGGCCGCTCCGACGGCGTCCCTGGAGAAGATTCAACGCCTCTGGACTCTGCTTT
JMFS099F10+ CCCAGCCGGCCGCTCCGACGGCGTCCCTGGAGAAGATTCAACGCCTCTGGACTCTGCTTT
JMFS167D05+ CCCAGCCGGCCGCTCCGACGGCGTCCCTGGAGAAGATTCAACGCCTCTGGACTCTGCTTT
JMFS071F01+ CCCAGCCGGCCGCTCCGACGGCGTCCCTGGAGAAGATTCAACGCCTCTGGACTCTGCTTT
JMFS046A01+ CCCATCTGGCCGCTCCGACGGCGTCCCTGGAGAAGATTCAACGCCTCTGGACTCTGCTTT
JMFS162C11+ GGACTCTGCTTT
JMSF039D05+ CCCAGCCGGCCGCTCCGACGGCGTCCCTGGAGAAGATTCAACGCCTCTGGACTCTGCTTT
____________________________________________________________
consensus CCCAGCCGGCCGCTCCGACGGCGTCCCTGGAGAAGATTCAACGCCTCTGGACTCTGCTTT
. : . : . : . : . : . :
JMFS075B07+ TCTTTCTCGTACCTCGTCGTCATTTTCGTTATCATCGTCATTTTCTTCGTATTCCTCGTC
JMFS064A06+ TCTTTCTCGTACCTCGTCGTCATTTTCGTTATCATCGTCATTTTCTTCGTATTCCTCGTC
JMFS099F10+ TCTTTCTCGTACCTCGTCGTCATTTTCGTTATCATCGTCATTTTCTTCGTATTCCTCGTC
JMFS167D05+ TCTTTCTCGTACCTCGTCGTCATTTTCGTTATCATCGTCATTTTCTTCGTATTCCTCGTC
JMFS071F01+ TCTTTCTCGTACCTCGTCGTCATTTTCGTTATCATCGTCATTTTCTTCGTATTCCTCGTC
JMFS046A01+ TCTTTCTCGTACCTTGTCGTCATTTTCGTTATCATCGTCATTTTCTTCGTATTCCTCGTC
JMFS162C11+ TCTTTCTCGTACCTCGTCGTCATTTTCGTTATCATAGTCATTTTCTTCGTATTCCTCGTC
JMSF039D05+ TCTTTCTCGTACCTCGTCGTCATTTTCGTTATCATCGTCATTTTCTTCGTATTCCTCGTC
____________________________________________________________
consensus TCTTTCTCGTACCTCGTCGTCATTTTCGTTATCATCGTCATTTTCTTCGTATTCCTCGTC
. : . : . : . : . : . :
JMFS075B07+ ATCGCCGTGGATTTTCCTTTTCTTCGACGGTTTCCCGTCGTCATCGTAGTCGGAGGAGGA
JMFS064A06+ ATCGCCGTGGATTTTCCTTTTCTTCGACGGTTTCCCGTCGTCATCGTAGTCGGAGGAGGA
JMFS099F10+ ATCGCCGTGGATTTTCCTTTTCTTCGACGGTTTCCCGTCGTCATCGTAGTCGGAGGAGGA
JMFS167D05+ ATCGCCGTGGATTTTCCTTTTCTTCGACGGTTTCCCGTCGTCATCGTAGTCGGAGGAGGA
JMFS071F01+ ATCGCCGTGGATTTTCCTTTTCTTCGACGGTTTCCCGTCGTCATCGTAGTCGGAGGAGGA
JMFS046A01+ ATCGCCGTGGATTTTCCTTTTCTTCGACGGTTTCCCGTCGTCTTCGTAGTCGGAGGAGGA
JMFS162C11+ ATCGCCGTGGATTTTCCTTTTCTTCGACGGTTTCCCGTCGTCATCGTAGTCGGAGGAGGA
JMSF039D05+ ATCGCCGTGGATTTTCCTTTTCTTCGACGGTTTCCCGTCGTCATCGTAGTCGGAGGAGGA
____________________________________________________________
consensus ATCGCCGTGGATTTTCCTTTTCTTCGACGGTTTCCCGTCGTCATCGTAGTCGGAGGAGGA
. : . : . : . : . : . :
JMFS075B07+ AGCTGACGCAGCGGGAGCGTGAGACACGCGCCGAGTTCGACTCGGAGTCAACTCGTCCTC
JMFS064A06+ AGCTGACGCAGCGGGAGCGTGAGACACGCGCCGAGTTCGACTCGGAGTCAACTCGTCCTC
JMFS099F10+ AGCTGACGCAGCGGGAGCGTGAGACACGCGCCGAGTTCGACTCGGAGTCAACTCGTCCTC
JMFS167D05+ AGCTGACGCAGCGGGAGCGTGAGACACGCGCCGAGTTCGACTCGGAGTCAACTCGTCCTC
JMFS071F01+ AGCTGACGCAGCGGGAGCGTGAGACACGCGCCGAGTTCGACTCGGAGTCAACTCGTCCTC
JMFS046A01+ AGCTGACGCAGCGGGAGCGTGAGACACGCGCCGAGTTCGACTCGGAGTCAACTCGTCCTC
JMFS162C11+ AGCTGACGCAGCGGGAGCGTGAGACACGCGCCGAGTTCGACTCGGAGTCAACTCGTCCTC
JMSF039D05+ AGCTGACGCAGCGGGAGCGTGAGACACGCGCCGAGTTCGACTCGGAGTCAACTCGTCCTC
____________________________________________________________
consensus AGCTGACGCAGCGGGAGCGTGAGACACGCGCCGAGTTCGACTCGGAGTCAACTCGTCCTC
. : . : . : . : . : . :
JMFS075B07+ GCCATC-GTTATCCTTACCCTGGAGCTTGAGCAAGAGCTCGAGCTTCTTTTCCCTCCGGC
JMFS064A06+ GCCATC-GTTATCCTTACCCTGGAGCTTGAGCAAGAGCTCGAGCTTCTTTTCCCTCCGGC
JMFS099F10+ GCCATC-GTTATCCTTACCCTGGAGCTTGAGCAAGAGCTCGAGCTTCTTTTCCCTCCGGC
JMFS167D05+ GCCATC-GTTATCCTTACCCTGGAGCTTGAGCAAGAGCTCGAGCTTCTTTTCCCTCCGGC
JMFS071F01+ GCCATC-GTTATCCTTACCCTGGAGCTTGAGCAAGAGCTCGAGCTTCTTTTCCCTCCGGC
JMFS046A01+ GCCATCTGTTATCCTTACCCTGGAGCTTGATCAAAAGCTCGAGCTTCTTTTCCCTCCGGC
JMFS162C11+ GCCATC-GTTATCCTTACCCTGGAGCTTGAGCAAGAGCTCGAGCTTCTTTTCCCTCCGGC
JMSF039D05+ GCCATC-GTTATCCTTACCCTGGAGCTTGAGCAAGAGCTCGAGCTTCTTTTCCCTCCGGC
____________________________________________________________
consensus GCCATC-GTTATCCTTACCCTGGAGCTTGAGCAAGAGCTCGAGCTTCTTTTCCCTCCGGC
. : . : . : . : . : . :
JMFS075B07+ TCTCGTCCTCGTCATCCTCCTCCAAAAAATACTCTTCGTCCAGGAAATCGTCGATGTCGA
JMFS064A06+ TCTCGTCCTCGTCATCCTCCTCCAAAAAATACTCTTCGTCCAGGAAATCGTCGATGTCGA
JMFS099F10+ TCTCGTCCTCGTCATCCTCCTCCAAAAAATACTCTTCGTCCAGGAAATCGTCGATGTCGA
JMFS167D05+ TCTCGTCCTCGTCATCCTCCTCCAAAAAATACTCTTCGTCCAGGAAATCGTCGATGTCGA
JMFS071F01+ TCTCGTCCTCGTCATCCTCCTCCAAAAAATACTCTTCGTCCAGGAAATCGTCGATGTCGA
JMFS046A01+ TCTCGTCCTCGTCATCCTCCTCCAAAAAATACTCTTCGTCCAGGAAATCGTCGATGTCGA
JMFS162C11+ TCTCGTCCTCGTCATCCTCCTCCAAAAAATACTCTTCGTCCAGGAAATCGTCGATGTCGA
JMSF039D05+ TCTCGTCCTCGTCATCCTCCTCCAAAAAATACTCTTCGTCCAGGAAATCGTCGATGTCGA
____________________________________________________________
consensus TCTCGTCCTCGTCATCCTCCTCCAAAAAATACTCTTCGTCCAGGAAATCGTCGATGTCGA
. : . : . : . : . : . :
JMFS075B07+ AAGTGTACCTGACATTTCGCCGCCGGCCGCTCCGCCGGACTTCCTTCTCCTCATCCTCGA
JMFS064A06+ AAGTGTACCTGACATTTCGCCGCCGGCCGCTCCGCCGGACTTCCTTCTCCTCATCCTCGA
JMFS099F10+ AAGTGTACCTGACATTTCGCCGCCGGCCGCTCCGCCGGACTTCCTTCTCCTCATCCTCGA
JMFS167D05+ AAGTGTACCTGACATTTCGCCGCCGGCCGCTCCGCCGGACTTCCTTCTCCTCATCCTCGA
JMFS071F01+ AAGTGTACCTGACATTTCGCCGCCGGCCGCTCCGCCGGACTTCCTTCTCCTCATCCTCGA
JMFS046A01+ AAGTGTACCTGACATTTCTCCGCCGGCCGCTCCGCCGGACCCCCTTCTCCTCATCCTCGA
JMFS162C11+ AAGTGTACCTGACATTTCGCCGCCGGCCGCTCCGCCGGACTTCCTTCTCCTCATCCTCGA
JMSF039D05+ AAGTGTACCTGACATTTCGCCGCCGGCCGCTCCGCCGGACTTCCTTCTCCTCATCCTCGA
____________________________________________________________
consensus AAGTGTACCTGACATTTCGCCGCCGGCCGCTCCGCCGGACTTCCTTCTCCTCATCCTCGA
. : . : . : . : . : . :
JMFS075B07+ CGGCTGCGTTGCGCCGCGCTGCGAGATCTGCCTTCGAC
JMFS064A06+ CGGCTGCGTTGCGCCGCGCTGCGAGATCTGCCTTCGACGGGCGTCCCTTCTTCTTCTTCC
JMFS099F10+ CGGCTGCGTTGCGCCGCGCTGCGAGATCTGCCTTCGACGGGCGTCCCTTCTTCTTCTTCC
JMFS167D05+ CGGCTGCGTTGCGCCGCGCTGCGAGATCTGCCTTCGACGGGCGTCCCTTCTTCTTCTTCC
JMFS071F01+ CGGCTGCGTTGCGCCGCGCTGCGAGATCTGCCTTCGACGGGCGTCCCTTCTTCTTCTTCC
JMFS046A01+ CGGCTGCGTTGCGCCGCGCTGCGAGATCTGCCTTCGACGGGCGTCCCTTCTTCTTCTTCC
JMFS162C11+ CGGCTGCGTTGCGCCGCGCTGCGAGATCTGCCTTCGACGGGCGTCCCTTCTTCTTCTTCC
JMSF039D05+ CGGCTGCGTTGCGCCGCGCTGCGAGATCTGCCTTCGACGGGCGTCCCTTCTTCTTCTTCC
____________________________________________________________
consensus CGGCTGCGTTGCGCCGCGCTGCGAGATCTGCCTTCGACGGGCGTCCCTTCTTCTTCTTCC
. : . : . : . : . : . :
JMFS064A06+ TCA
JMFS099F10+ TCACGATCTGGCCCATCCTTTT
JMFS167D05+ TCACGATCTGGCCCATCCTTTTGAGCTTCCT
JMFS071F01+ TCACGATCTGGCCCATCCTTTTGAGCTTCCTTCCTTCTTTC
JMFS046A01+ TCACGATCTGGCCCATCCTTTTGAGCTTCCTTCCTTCTTTCTCACCCTCTCTCTCTCTAG
JMFS162C11+ TCACGATCTGGCCCATCCTTTTGAGCTTCCTTCCTTCTTTCTCACCCTCTCTCTCTCTAG
JMSF039D05+ TCACGATCTGGCCCATCCTTTTGAGCTTCCTTCCTTCTTTCTCACCCTCTCTCTCTCTAG
____________________________________________________________
consensus TCACGATCTGGCCCATCCTTTTGAGCTTCCTTCCTTCTTTCTCACCCTCTCTCTCTCTAG
. : . : . : . : . : . :
JMFS046A01+ AACCCTCCCTCTCCCTGTCTCTCTCTAGATTCTCTCCCCCCCAT
JMFS162C11+ AACCCTCCCTCTC
JMSF039D05+ AACCCTCCCTCTCCCTGTCTCTCTCTAGATTCTCTCCCCCCCATTCTCTCTCCTCTTTTC
____________________________________________________________
consensus AACCCTCCCTCTCCCTGTCTCTCTCTAGATTCTCTCCCCCCCATTCTCTCTCCTCTTTTC