Contig 013487:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF039C11-                                                             AGCTCCAGC
                      ____________________________________________________________
consensus                                                                AGCTCCAGC
 
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rJMSF039C11-          AAAATAAAAAGTTCCGTTCTAAACAAATTGATTGATAAATACTGCAATTGCTAGAGAAAA
                      ____________________________________________________________
consensus             AAAATAAAAAGTTCCGTTCTAAACAAATTGATTGATAAATACTGCAATTGCTAGAGAAAA
 
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rJMSF039C11-          CCTATATCAGTTCATAAACAAGATACACTACTAAAGTGCTGAGTTCCTATACTACTGAAA
                      ____________________________________________________________
consensus             CCTATATCAGTTCATAAACAAGATACACTACTAAAGTGCTGAGTTCCTATACTACTGAAA
 
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rJMSF039C11-          AAGCAAAAGGCAAGGCTTAAGAAATGCAGTGTCATCAAGATGAGAAGCAACTTCAGAACC
                      ____________________________________________________________
consensus             AAGCAAAAGGCAAGGCTTAAGAAATGCAGTGTCATCAAGATGAGAAGCAACTTCAGAACC
 
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rJMSF039C11-          TAAATGTTCAAATTGTTTGCGGTTTTGCCAGAATTCGAAAGTTGAACAGCACTCATATAT
                      ____________________________________________________________
consensus             TAAATGTTCAAATTGTTTGCGGTTTTGCCAGAATTCGAAAGTTGAACAGCACTCATATAT
 
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rJMSF039C11-          CCATCCCAAGCCAATAATTCATTCCAAAGTTTGAAAGAGGGAAATTTACCACTGGAGATC
                      ____________________________________________________________
consensus             CCATCCCAAGCCAATAATTCATTCCAAAGTTTGAAAGAGGGAAATTTACCACTGGAGATC
 
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rJMSF039C11-          AGTCACAGCCCCTCTAACATTCAGGGGTTGGCATTCTCCTGGCCTTCTTAGGGTTCTTTT
                      ____________________________________________________________
consensus             AGTCACAGCCCCTCTAACATTCAGGGGTTGGCATTCTCCTGGCCTTCTTAGGGTTCTTTT
 
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rJMSF039C11-          CAGAGAATGACATGGCAAAAGCTTCGACGATCTTTTGTTGGGATTCAAGAATCATTTCAG
                      ____________________________________________________________
consensus             CAGAGAATGACATGGCAAAAGCTTCGACGATCTTTTGTTGGGATTCAAGAATCATTTCAG
 
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rJMSF039C11-          TCTTCTTCATCTCCATTTCCATCTTCATCTGTTCTAACTCCCTTGCGACATCCATTTTCA
                      ____________________________________________________________
consensus             TCTTCTTCATCTCCATTTCCATCTTCATCTGTTCTAACTCCCTTGCGACATCCATTTTCA
 
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rJMSF039C11-          TATTCTCTACCCTCACTAATCCTTCTCCCAGCATCTTAATTGCTGCCACTGCCTCTGCTA
                      ____________________________________________________________
consensus             TATTCTCTACCCTCACTAATCCTTCTCCCAGCATCTTAATTGCTGCCACTGCCTCTGCTA
 
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rJMSF039C11-          TGGGGTCTCCATTTCTCTTCTCAACCACCTCTTCAACGATCCTTTTCCCCAAAGAAGAAG
                      ____________________________________________________________
consensus             TGGGGTCTCCATTTCTCTTCTCAACCACCTCTTCAACGATCCTTTTCCCCAAAGAAGAAG
 
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rJMSF039C11-          CTTTCTCTTTCTTCATAACCCCATCTCGTCTATACGACCTACTGGAGCCATGATTAGGGT
                      ____________________________________________________________
consensus             CTTTCTCTTTCTTCATAACCCCATCTCGTCTATACGACCTACTGGAGCCATGATTAGGGT
 
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rJMSF039C11-          TAGGGTTAGGGTTAGGGAATTGGATCAACATTTCATCAATTTTGCTGTAAGGCTTGGCCA
                      ____________________________________________________________
consensus             TAGGGTTAGGGTTAGGGAATTGGATCAACATTTCATCAATTTTGCTGTAAGGCTTGGCCA
 
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rJMSF039C11-          TGGGAGGAGTGGGGATAGGCCTAGCACTGGGAATTCGGATCCGAAATCCAGCTCCGCCAT
JMSF039C11+                                     CTGGGAATTCGGATCCGAAATCCAGCTCCGCCAT
                      ____________________________________________________________
consensus             TGGGAGGAGTGGGGATAGGCCTAGCACTGGGAATTCGGATCCGAAATCCAGCTCCGCCAT
 
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rJMSF039C11-          TACTCATAGGCTCTTGAAAGTTATTCCGTTTATNANAATTCAGATGGTGCTGGCTGTATA
JMSF039C11+           TACTCATAGGCTCTTGAAAGTTATTCCGTTTATTAGAATTCAGATTGTGCTGGCTGTATA
                      ____________________________________________________________
consensus             TACTCATAGGCTCTTGAAAGTTATTCCGTTTATTAGAATTCAGATTGTGCTGGCTGTATA
 
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rJMSF039C11-          TATCACCGATGGGNTTTAACGCTATTTTGGCTTGAAATCCTCCGGCTCATCTTCAAATTC
JMSF039C11+           TATCACCGATGTG-TTTAACGCTATTTT-GCTTGAAATCNTCCGGCTCATCTTCAAATTC
                      ____________________________________________________________
consensus             TATCACCGATGTGNTTTAACGCTATTTTGGCTTGAAATCCTCCGGCTCATCTTCAAATTC
 
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rJMSF039C11-          TTCCTCATCCT                                                 
JMSF039C11+           TTCCTCATCCTGTGGCGGAGAGGCCGCGTCGGGGCCCCTTTCCATGGCGTCCATGCGTTT
                      ____________________________________________________________
consensus             TTCCTCATCCTGTGGCGGAGAGGCCGCGTCGGGGCCCCTTTCCATGGCGTCCATGCGTTT
 
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JMSF039C11+           GAAGTGGATCCAGGTGGAGCAGTAGCGGCGGGTGGAGCCACCGCCGTAGGAAGCCGCGCG
                      ____________________________________________________________
consensus             GAAGTGGATCCAGGTGGAGCAGTAGCGGCGGGTGGAGCCACCGCCGTAGGAAGCCGCGCG
 
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JMSF039C11+           TTGGATCTCAGCGCGGTAGCGTTTCCGAAGCTTCTCCATCTTGTGCCGGCACTGCATCGA
                      ____________________________________________________________
consensus             TTGGATCTCAGCGCGGTAGCGTTTCCGAAGCTTCTCCATCTTGTGCCGGCACTGCATCGA
 
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JMSF039C11+           TGTCTTGGGAGGATCGACAGGGCACCGGACGGCGATATCCTCCGCGACTTCCTGCCAGTG
                      ____________________________________________________________
consensus             TGTCTTGGGAGGATCGACAGGGCACCGGACGGCGATATCCTCCGCGACTTCCTGCCAGTG
 
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JMSF039C11+           ATTCGCCCGGAGATTCCCGCGGCGGAGGGAATACCACTTGTCCCTATAAGCGTCGATGAG
                      ____________________________________________________________
consensus             ATTCGCCCGGAGATTCCCGCGGCGGAGGGAATACCACTTGTCCCTATAAGCGTCGATGAG
 
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JMSF039C11+           CGCTACGGTCTCGTCGTGGGACCAGCACGGCGGAGGGAGGCGGCGAGAGGAAGCGCCGGC
                      ____________________________________________________________
consensus             CGCTACGGTCTCGTCGTGGGACCAGCACGGCGGAGGGAGGCGGCGAGAGGAAGCGCCGGC
 
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JMSF039C11+           GCCGTGGGACGCGACGGTGACGCTGGCGAACGGGATCTCGGGCGGGGTCGTACACTGTTC
                      ____________________________________________________________
consensus             GCCGTGGGACGCGACGGTGACGCTGGCGAACGGGATCTCGGGCGGGGTCGTACACTGTTC
 
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JMSF039C11+           CTGGTTCGATTGGGTGGGCGACGCGGCCATGGCGGAAGGCGCGTGTGAGAAAAAGTGAAA
                      ____________________________________________________________
consensus             CTGGTTCGATTGGGTGGGCGACGCGGCCATGGCGGAAGGCGCGTGTGAGAAAAAGTGAAA
 
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JMSF039C11+           GCGCGTAGTAAGGTAAGAGGGGGAGGAGGGGATTTATGGGCGGCGGAGAACGGTGACATC
                      ____________________________________________________________
consensus             GCGCGTAGTAAGGTAAGAGGGGGAGGAGGGGATTTATGGGCGGCGGAGAACGGTGACATC