Contig 013482:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS122H08Sequence268013482 (2)
JMSF038I03Sequence624013482 (2)ref|XP_011089172.1|90.5PREDICTED: uncharacterized protein LOC105170202 [Sesamum indicum]878016158ref|XP_010644331.1|9e-42PREDICTED: disease resistance protein At4g27190-like isoform X3 [Vitis vinifera

Alignment

This contig is upended


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JMSF038I03+                                              TTCAACAGATCCATCATCTTCGCCA
                      ____________________________________________________________
consensus                                                TTCAACAGATCCATCATCTTCGCCA
 
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JMSF038I03+           AATTTCTTGATGCAGTGGGTTGATCTTCGATTGATGTGACCGCAATATACTGAACTGGCC
                      ____________________________________________________________
consensus             AATTTCTTGATGCAGTGGGTTGATCTTCGATTGATGTGACCGCAATATACTGAACTGGCC
 
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JMSF038I03+           TTGCCACAGGAATACCCACTATCTTGTCCTCAAAGGGTTTGCCTTCTTCAATGAGTTGCT
                      ____________________________________________________________
consensus             TTGCCACAGGAATACCCACTATCTTGTCCTCAAAGGGTTTGCCTTCTTCAATGAGTTGCT
 
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JMSF038I03+           TTGCTTTCACAATCTGTTTCGCTATGTCGTTGCTCAATTTGCAGTGCAGGGAACCTGAGC
                      ____________________________________________________________
consensus             TTGCTTTCACAATCTGTTTCGCTATGTCGTTGCTCAATTTGCAGTGCAGGGAACCTGAGC
 
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JMSF038I03+           AACAAGAGGCGGAATCACTTGTAATGCCACATTCTGTCACAGTTGAACGCAAAGAGTTGA
                      ____________________________________________________________
consensus             AACAAGAGGCGGAATCACTTGTAATGCCACATTCTGTCACAGTTGAACGCAAAGAGTTGA
 
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JMFS122H08+                                           CAATCTTCAACTTGAGCTGTCGGTAACA
JMSF038I03+           AATTGTTCTCCAATTCTTCAACTTTTCTTAACCAATCTTCAACTTGAGCTGTCGGTAACA
                      ____________________________________________________________
consensus             AATTGTTCTCCAATTCTTCAACTTTTCTTAACCAATCTTCAACTTGAGCTGTCGGTAACA
 
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JMFS122H08+           GATGCTGCAGTTGCTCATCATTTAGCCCCCTTCTCAAGTGAGTCTTGAGATCCAATACAA
JMSF038I03+           GATGCTGCAGCTGCTCATCATTTAGCCCCCTTCTCAAGTGAGTCTTGAGATCCAATACAA
                      ____________________________________________________________
consensus             GATGCTGCAGTTGCTCATCATTTAGCCCCCTTCTCAAGTGAGTCTTGAGATCCAATACAA
 
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JMFS122H08+           GTGTTATGTCTCTCTCAAGATGCTTGTAATTTGAATGGATCTTAAAACGATTCTTCATCG
JMSF038I03+           GTGTTATGTCTCTCTCAAGATGCTTGTAATTTGAATGGATCTTAAAACGATTCTTCATCG
                      ____________________________________________________________
consensus             GTGTTATGTCTCTCTCAAGATGCTTGTAATTTGAATGGATCTTAAAACGATTCTTCATCG
 
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JMFS122H08+           CAGCATAGATGGATCCAAATAGAACTTTAAAAGGTTCTGTTAGAGCTGAACCAATAATCC
JMSF038I03+           CAGCATAGATGGATCCAAATAGAACTTTAAAAGGTTCTGTTAGAGCTGAACCAATAATCC
                      ____________________________________________________________
consensus             CAGCATAGATGGATCCAAATAGAACTTTAAAAGGTTCTGTTAGAGCTGAACCAATAATCC
 
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JMFS122H08+           CCGCCACAGCTTCCATGGCAATGTATTGAGTACATCACTACACAGGAAGGAAGAAATTCA
JMSF038I03+           CCGCCACAGCTTCCATGGCAATGTATTGAGTACA-CACTACACAGGAAGGAAGAAATTCA
                      ____________________________________________________________
consensus             CCGCCACAGCTTCCATGGCAATGTATTGAGTACATCACTACACAGGAAGGAAGAAATTCA
 
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JMSF038I03+           AGATTNTGTGACAAAATTTGAGAGGTTTTTTTCTTTCTTTCTTTTGAACTAATACTGATC
                      ____________________________________________________________
consensus             AGATTNTGTGACAAAATTTGAGAGGTTTTTTTCTTTCTTTCTTTTGAACTAATACTGATC