Contig 013478:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF013H23Sequence237013478 (4)717013478 (4)ref|XP_006352846.1|9e-64PREDICTED: protein LOL1-like isoform X4 [Solanum tuberosum]
JMSF037P10Sequence643013478 (4)ref|XP_006352843.1|7e-58PREDICTED: protein LOL1-like isoform X1 [Solanum tuberosum] ref|XP_006352844.1| 678013478 (4)ref|XP_006352843.1|2e-64PREDICTED: protein LOL1-like isoform X1 [Solanum tuberosum] ref|XP_006352844.1|

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF037P10- TGGGACATTACAGCAAAGTTTCATGGTATATTTGAACTAACAAGTCATTGG
                      ____________________________________________________________
consensus TGGGACATTACAGCAAAGTTTCATGGTATATTTGAACTAACAAGTCATTGG
 
. : . : . : . : . : . :
rJMSF037P10- ATATAACATTATTTGCAGATTCAAAAGGGCAAAACTGCTTTATTTGTATTACAATCACGC
                      ____________________________________________________________
consensus ATATAACATTATTTGCAGATTCAAAAGGGCAAAACTGCTTTATTTGTATTACAATCACGC
 
. : . : . : . : . : . :
rJMSF037P10- GAGAAGAAATAACTCAATACATGCAGCAAGGAGAGGTTTCCTTTGCTTGTGGAAAGACAC
                      ____________________________________________________________
consensus GAGAAGAAATAACTCAATACATGCAGCAAGGAGAGGTTTCCTTTGCTTGTGGAAAGACAC
 
. : . : . : . : . : . :
rJMSF037P10- ATCCAATGGTACAAGCTTAGCGGTTTCACCTTTCAGTTTATTACTTCTGGTCGTTGGTGC
                      ____________________________________________________________
consensus ATCCAATGGTACAAGCTTAGCGGTTTCACCTTTCAGTTTATTACTTCTGGTCGTTGGTGC
 
. : . : . : . : . : . :
rJMSF037P10- TTGCTGAAACCCCCACTGATGTCACAAAATTGCACACTGCACATTTCACAGATCTTGCTC
rJMSF013H23- TGAAACCCCCACTGATGTCACAAAATTGCACACTGCACATTTCACAGATCTTGCTC
JMSF037P10+ TGTCACAAAATTGCACACTGCACATTTCACAGATCTTGCTC
                      ____________________________________________________________
consensus TTGCTGAAACCCCCACTGATGTCACAAAATTGCACACTGCACATTTCACAGATCTTGCTC
 
. : . : . : . : . : . :
rJMSF037P10- CATATTGATACATTAGTAGCATTCTGCAGTTGCCACAGTTCACATGTGCAACCTGGTTTG
rJMSF013H23- CATATTGATACATTAGTAGCATTCTGCAGTTGCCACAGTTCACATGTGCAACCTGGTTTG
JMSF037P10+ CATATTGATACATTAGTAGCATTCTGCAGTTGCCACAGTTCACATGTGCAACCTGGTTTG
                      ____________________________________________________________
consensus CATATTGATACATTAGTAGCATTCTGCAGTTGCCACAGTTCACATGTGCAACCTGGTTTG
 
. : . : . : . : . : . :
rJMSF037P10- CTTCCATAGCTAAGTTGACAGTGTGGCAGCACGAGCACTGCACACTCGTTGCTCCACGAA
rJMSF013H23- CTTCCATAGCTAAGTTGACAGTGTGGCAGCACGAGCACTGCACACTCGTTGCTCCACGAA
JMSF037P10+ CTTCCATAGCTAAGTTGACAGTGTGGCAGCACGAGCACTGCACACTCGTTGCTCCACGAA
                      ____________________________________________________________
consensus CTTCCATAGCTAAGTTGACAGTGTGGCAGCACGAGCACTGCACACTCGTTGCTCCACGAA
 
. : . : . : . : . : . :
rJMSF037P10- TGTACATTAGTAATGTGTGGCAGCCACCGCAGACTAACTGAGCCATTTCAGTGCCTGGTG
rJMSF013H23- TGTACATTAGTAATGTGTGGCAGCCACCGCAGACTAACTGAGCCATTTCAGTGCCTGGTG
JMSF037P10+ TGTACATTAGTAATGTGTGGCAGCCACCGCAGACTAACTGAGCCATTTCAGTGCCTGGTG
                      ____________________________________________________________
consensus TGTACATTAGTAATGTGTGGCAGCCACCGCAGACTAACTGAGCCATTTCAGTGCCTGGTG
 
. : . : . : . : . : . :
rJMSF037P10- GAGGTACTGCTGTGACTGCATTGCACACTGCACAGCACACAGAGGTTGCTCCGACTGGAT
rJMSF013H23- GAGGTACTGCTGTGACTGCATTGCACACTGCACAGCACACAGAGGTTGCTCCGACTGGAT
JMSF037P10+ GAGGTACTGCTGTGACTGCATTGCACACTGCACAGCACACAGAGGTTGCTCCGACTGGAT
                      ____________________________________________________________
consensus GAGGTACTGCTGTGACTGCATTGCACACTGCACAGCACACAGAGGTTGCTCCGACTGGAT
 
. : . : . : . : . : . :
rJMSF037P10- ACATCAAAAGGTTGCGACAGCCAGAACATACTAGCTGGCTTTGTG
rJMSF013H23- ACATCAAAAGGTTGCGACAGCCAGAACATACTAGCTGGCTTTGTGTACCATT
JMSF037P10+ ACATCAAAAGGTTGCGACAGCCAGAACATACTAGCTGGCTTTGTGTACCTGCATTTGCAG
                      ____________________________________________________________
consensus ACATCAAAAGGTTGCGACAGCCAGAACATACTAGCTGGCTTTGTGTACCTTTATTTGCAG
 
. : . : . : . : . : . :
JMSF037P10+ GTGGCATGTATGGTGCAGGGGGTGTTGGATATGGAGCAAGAGGAACTGGCATTGTGAATC
                      ____________________________________________________________
consensus GTGGCATGTATGGTGCAGGGGGTGTTGGATATGGAGCAAGAGGAACTGGCATTGTGAATC
 
. : . : . : . : . : . :
JMSF013H23+ GAAAATGGTAGGCCCTTCTCTCCCCAGATCTTAAAAGCTTGCTTCAGGGACATGAAACA
JMSF037P10+ TGAAAATGGTAGGCCCTTCTCTCCCCAGATCTTAAAAGCTTGCTTCAGGGACATGAAACA
                      ____________________________________________________________
consensus TGAAAATGGTAGGCCCTTCTCTCCCCAGATCTTAAAAGCTTGCTTCAGGGACATGAAACA
 
. : . : . : . : . : . :
JMSF013H23+ CACCAGAACTCATCTTTGTTTTGTCATGAAGTAATATGCATCTCTTGGGGCATTGAAGAA
JMSF037P10+ CACCAGAACTCATCTTTGTTTTGTCATGAAGTAATATGCATCTCTTGGGGCATTGAAGAA
                      ____________________________________________________________
consensus CACCAGAACTCATCTTTGTTTTGTCATGAAGTAATATGCATCTCTTGGGGCATTGAAGAA
 
. : . : . : . : . : . :
JMSF013H23+ CAGAGAAATTTGGTTGAGAGCTGTGAAGTGAGTGAGACACACTCCTTGACAGTGGAGGAT
JMSF037P10+ CAGAGAAATTTGGTTGAGAGCTGTGAAGTGAGTGAGACACACTCCTTGACAGTGGAGGAT
                      ____________________________________________________________
consensus CAGAGAAATTTGGTTGAGAGCTGTGAAGTGAGTGAGACACACTCCTTGACAGTGGAGGAT
 
. : . : . : . : . : . :
JMSF013H23+ GAAAGAGAAAAAGAATGGTTTTCTTTATAATTTTTTGGTTGCTTTTTGTGGCTTTGT
JMSF037P10+ GAAAGAGAAAAAGAATGGTTTTCTTTATAATTTTTTGGTTGCTTTTTGTGGCTTTGTGCC
                      ____________________________________________________________
consensus GAAAGAGAAAAAGAATGGTTTTCTTTATAATTTTTTGGTTGCTTTTTGTGGCTTTGTGCC