Contig 013476:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN018O05Sequence615013476 (3)ref|XP_011090148.1|1e-108PREDICTED: ubiquitin-conjugating enzyme E2 20-like [Sesamum indicum]
JMFN028G20Sequence567013476 (3)ref|XP_007015153.1|5e-87Ubiquitin-conjugating enzyme19 isoform 1 [Theobroma cacao] ref|XP_007015154.1| U
JMSF037O08Sequence639013476 (3)ref|XP_007015153.1|2e-98Ubiquitin-conjugating enzyme19 isoform 1 [Theobroma cacao] ref|XP_007015154.1| U714011147 (11)gb|AAF22842.1|AF209910_16e-54vacuolar sorting receptor protein [Prunus dulcis]

Alignment

This contig is upended


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JMFN018O05+                GTGACCCCCTCCTCGACAAACATCTCTNTGCGGCACCAATGAGCTTCAAGATGCT
                      ____________________________________________________________
consensus                  GTGACCCCCTCCTCGACAAACATCTCTNTGCGGCACCAATGAGCTTCAAGATGCT
 
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JMFN018O05+           AAAATCTACACAGCTGGTTTGTATAGCTTCTCAACCATCTTTCTGTATTCTTGTTGATTG
JMSF037O08+                                 ATAGCTTCTCAACCATCTTTCTGTACTCTTCTTGATTG
                      ____________________________________________________________
consensus             AAAATCTACACAGCTGGTTTGTATAGCTTCTCAACCATCTTTCTGTATTCTTGTTGATTG
 
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JMFN018O05+           CCCCACAGCGATGCTGCCTGAGTGTTTAGAGGCGAGCTTGTGTTTGGTTCTCCAAGCAAA
JMFN028G20+                                      AGAGGCGAGCTGATGTTTGGCTCTCCTAGCAAA
JMSF037O08+           CCCCATAGCGCTGCCGCTTGAGAATTGAGAGGCGAGCTGATGTTTGGCTCTCCTAGCAAA
                      ____________________________________________________________
consensus             CCCCATAGCGCTGCTGCTTGAGTGTTTAGAGGCGAGCTGATGTTTGGCTCTCCTAGCAAA
 
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JMFN018O05+           CTTTGAATAGAGAGCAGTATAGTCCTCACATCATAAGCAGATGACCATTTGTCCTGAAGG
JMFN028G20+           CTCTGGATTGAGAGTAGTATAGTCCTGACATCATATGCAGATGACCATTTGTCCTGAAGA
JMSF037O08+           CTCTGGATTGAGAGTAGTATAGTCCTGACATCATATGCAGATGACCATTTGTCCTGAAGA
                      ____________________________________________________________
consensus             CTCTGGATTGAGAGTAGTATAGTCCTGACATCATATGCAGATGACCATTTGTCCTGAAGA
 
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JMFN018O05+           ATGTCCAAGCATATGTTCCCATACACATCAACGTTGGGATGAAAACAACCTGTCTCGAAC
JMFN028G20+           ATGTCCAAGCATATGTTCCCAAACACATCAACATTGGGATGAAAACAAGCAGTCTCGAAT
JMSF037O08+           ATGTCCAAGCATATGTTCCCAAACACATCAACATTGGGATGAAAACAAGCAGTCTCGAAT
                      ____________________________________________________________
consensus             ATGTCCAAGCATATGTTCCCAAACACATCAACATTGGGATGAAAACAAGCAGTCTCGAAT
 
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JMFN018O05+           TTAACCTTGGGCGGTTTGAATGGATACTCATTTGGAAAGGCCAGAGAAAGCCTGTATTCT
JMFN028G20+           TTCACGGTGGGGGGTTTGAATGGATACTCGTTCGGGAAGGCAAGGGAGAGCTTGTATTCT
JMSF037O08+           TTCACGGTGGGGGGTTTGAATGGATACTCGTTCGGGAAGGCAAGGGAGAGCTTGTATTCT
                      ____________________________________________________________
consensus             TTCACGGTGGGGGGTTTGAATGGATACTCGTTCGGGAAGGCAAGGGAGAGCTTGTATTCT
 
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JMFN018O05+           GTTCCTTCAAACACCGTGTCTTTGCTACCAGTGATCGTCCCTTTCCAGCAAAATATGTTG
JMFN028G20+           GTTCCTTCGAAAACAGTATCTTTGCTACCAGTGATTGTCCCTTTCCAGCAAAATATGTTG
JMSF037O08+           GTTCCTTCGAAAACAGTATCTTTGCTACCAGTGATTGTCCCTTTCCAGCAAAATATGTTG
                      ____________________________________________________________
consensus             GTTCCTTCGAAAACAGTATCTTTGCTACCAGTGATTGTCCCTTTCCAGCAAAATATGTTG
 
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JMFN018O05+           TCTTCTTCAGGGAAAGCTGATATTCCTGAATCACCACTCATCATCAGGGCCATCAGTTCA
JMFN028G20+           TCTTCTTCAGGGAATGCTGATATTCCAGAATCACCACTCATCATCAAAGCCATCAGTTCG
JMSF037O08+           TCTTCTTCAGGGAATGCTGATATTCCAGAATCACCACTCATCATCAAAGCCATCAGTTCG
                      ____________________________________________________________
consensus             TCTTCTTCAGGGAATGCTGATATTCCAGAATCACCACTCATCATCAAAGCCATCAGTTCG
 
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JMFN018O05+           GATTGCAGCCTTTTGAGAACGGATTGGGTGTCGACGGACTTAGC                
JMFN028G20+           GATTGCAACCTTTTGAGAACGGACTGGGTGTCGACGGTCTTAGCTGGAGGCAGTGGCTTC
JMSF037O08+           GATTGCAACCTTTTGAGAACGGACTGGGTGTCGACGGTCTTAGCTGGAGGCAGTGGCTTC
                      ____________________________________________________________
consensus             GATTGCAACCTTTTGAGAACGGACTGGGTGTCGACGGTCTTAGCTGGAGGCAGTGGCTTC
 
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JMFN028G20+           TTCGGTGACGGCATCACGGGGAGACTGTTAGGGTTGGTATTTGCCGCCGCCATTGCTACA
JMSF037O08+           TTCGGTGACGGCATCACGGGGAGACTGTTAGGGTTGGTATTTGCCGCCGCCATTGCTACA
                      ____________________________________________________________
consensus             TTCGGTGACGGCATCACGGGGAGACTGTTAGGGTTGGTATTTGCCGCCGCCATTGCTACA
 
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JMFN028G20+           CAAATTCTTAATGATCTGAACCCGATAGAGAGAAAGACTCTTCCGGTACAGAATCAGAGA
JMSF037O08+           CAAATTCTTAATGATCTGAACCCGATAGAGAGAAAGACTCTTCCGGTACAGAATCAGAGA
                      ____________________________________________________________
consensus             CAAATTCTTAATGATCTGAACCCGATAGAGAGAAAGACTCTTCCGGTACAGAATCAGAGA
 
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JMFN028G20+           GAGAAAGAGAGAAAAAAAGAGAGAGCGAGAGAGA                          
JMSF037O08+           GAGAAAGAGAGAAAAAAAGAGAGAGCGAGAGAGATTATCTGCCGGAAGAGTGTTCGGGTC
                      ____________________________________________________________
consensus             GAGAAAGAGAGAAAAAAAGAGAGAGCGAGAGAGATTATCTGCCGGAAGAGTGTTCGGGTC