Contig 013475:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF037N11Sequence660013475 (2)ref|XP_006358703.1|2e-68PREDICTED: tropinone reductase homolog At1g07440-like isoform X1 [Solanum tuber754013475 (2)ref|XP_004240378.1|4e-107PREDICTED: tropinone reductase homolog [Solanum lycopersicum]

Alignment

This contig is upended


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rJMSF037N11-                                       AAAGAATTTGTCAACTACTATGAAATCTGAT
                      ____________________________________________________________
consensus                                          AAAGAATTTGTCAACTACTATGAAATCTGAT
 
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rJMSF037N11-          AGCACTTCTATTACTGAATGGTCACAAGATCCAATAGAAAACAAAGAATTTACCAATTAC
                      ____________________________________________________________
consensus             AGCACTTCTATTACTGAATGGTCACAAGATCCAATAGAAAACAAAGAATTTACCAATTAC
 
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rJMSF037N11-          TATGTGGCCGTTATGAAATGGTTACAGGATCGAACCTGGTGGTGAGGCATTGATTCTTTG
                      ____________________________________________________________
consensus             TATGTGGCCGTTATGAAATGGTTACAGGATCGAACCTGGTGGTGAGGCATTGATTCTTTG
 
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rJMSF037N11-          GGCGGAAAGAGTTCGTTTTCTGCAGTTTTAGCCATGCCGGGGATAAAATCCATTTACGGT
                      ____________________________________________________________
consensus             GGCGGAAAGAGTTCGTTTTCTGCAGTTTTAGCCATGCCGGGGATAAAATCCATTTACGGT
 
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rJMSF037N11-          CATGCCACCATCGACACAAATGATCTGACCAGTTATGTAAGATGAAGCAGGTAAACAGAG
                      ____________________________________________________________
consensus             CATGCCACCATCGACACAAATGATCTGACCAGTTATGTAAGATGAAGCAGGTAAACAGAG
 
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rJMSF037N11-          GAATGCCACAAGAGAAGACACCTCTTCGGGCTCTCCCAGGCGTCTTAGAGGAGTCCTATC
                      ____________________________________________________________
consensus             GAATGCCACAAGAGAAGACACCTCTTCGGGCTCTCCCAGGCGTCTTAGAGGAGTCCTATC
 
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rJMSF037N11-          ATAAACCTCCTCTACATATTCCTCATTACTCAGCACTTGCTCCACCATAGATGTTCTGAT
                      ____________________________________________________________
consensus             ATAAACCTCCTCTACATATTCCTCATTACTCAGCACTTGCTCCACCATAGATGTTCTGAT
 
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rJMSF037N11-          GTACCAAGGCGCGACACCATTGCTCCTGATATTGTCTTTTGCCCACTCACACGCCAAGCT
                      ____________________________________________________________
consensus             GTACCAAGGCGCGACACCATTGCTCCTGATATTGTCTTTTGCCCACTCACACGCCAAGCT
 
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rJMSF037N11-          TTTCGTAAGTTGGTTAATAGCTCCTTTCGTTGCTCCTTGGACAGACATAGACTTCAGTGA
                      ____________________________________________________________
consensus             TTTCGTAAGTTGGTTAATAGCTCCTTTCGTTGCTCCTTGGACAGACATAGACTTCAGTGA
 
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rJMSF037N11-          TACAAAAGCCGAGACAGATGAAGTGAATACAACACATCCTGCCCCCGATGCTTTAAGAAG
                      ____________________________________________________________
consensus             TACAAAAGCCGAGACAGATGAAGTGAATACAACACATCCTGCCCCCGATGCTTTAAGAAG
 
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rJMSF037N11-          AGGATAGGCAAGTTGGCATAGATGAAAAACTGATTCGAAGTTTGTTGCCAATAGGGTGGT
JMSF037N11+           AGGATAGGCAAGTTGGCATAGATGAAAAACTGATTCGAAGTTTGTTGCCAATAGGGTGGT
                      ____________________________________________________________
consensus             AGGATAGGCAAGTTGGCATAGATGAAAAACTGATTCGAAGTTTGTTGCCAATAGGGTGGT
 
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rJMSF037N11-          AAAGTCCTCGGCTGTGAAATCCGATACAGGTTTTCGTATATTTGTCCCAACATTGTTTAT
JMSF037N11+           AAAGTCCTCGGCTGTGAAATCCGATACAGGTTTTCGTATATTTGTCCCAACATTGTTTAT
                      ____________________________________________________________
consensus             AAAGTCCTCGGCTGTGAAATCCGATACAGGTTTTCGTATATTTGTCCCAACATTGTTTAT
 
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rJMSF037N11-          AAGGATATCGAGCTTTCCACTGAAAGTAGAAGAAACAGCCTCCATTAGCTTCTGGCGATC
JMSF037N11+           AAGGATATCGAGCTTTCCACTGAAAGTAGAAGAAACAGCCTCCATTAGCTTCTGGCGATC
                      ____________________________________________________________
consensus             AAGGATATCGAGCTTTCCACTGAAAGTAGAAGAAACAGCCTCCATTAGCTTCTGGCGATC
 
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rJMSF037N11-          AGG                                                         
JMSF037N11+           AGGCCGAGAAGACACATCGCACACTGATCCACTCACTTCAAACCCTTCCTCTTTCCATCC
                      ____________________________________________________________
consensus             AGGCCGAGAAGACACATCGCACACTGATCCACTCACTTCAAACCCTTCCTCTTTCCATCC
 
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JMSF037N11+           CCTCAAGCATTTTCCCAGCTCCTCTTCGCTACGGGCGCAAGTATGCACGCTGGCTCCAAG
                      ____________________________________________________________
consensus             CCTCAAGCATTTTCCCAGCTCCTCTTCGCTACGGGCGCAAGTATGCACGCTGGCTCCAAG
 
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JMSF037N11+           TCCCGCCAATTCCTCCACAATGGCGTTCCCAATGCCTCTGGTGCCGCCGGTAACGAGGGC
                      ____________________________________________________________
consensus             TCCCGCCAATTCCTCCACAATGGCGTTCCCAATGCCTCTGGTGCCGCCGGTAACGAGGGC
 
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JMSF037N11+           ACTCATGCCGTGAAGTGACCACCGGTCGCCGCCTTTCCTGGAATGTGCGGTGACCGTCCA
                      ____________________________________________________________
consensus             ACTCATGCCGTGAAGTGACCACCGGTCGCCGCCTTTCCTGGAATGTGCGGTGACCGTCCA
 
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JMSF037N11+           CTTGCGTGTGCGAGTGATAGTGTGTTTTGATAGTCGGACGCCGTGAGGGGCGGCGGCTGA
                      ____________________________________________________________
consensus             CTTGCGTGTGCGAGTGATAGTGTGTTTTGATAGTCGGACGCCGTGAGGGGCGGCGGCTGA
 
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JMSF037N11+           GTGTAAAGGCGCTAGGGGAGATCGTACGACGAGGGTCTGAGACATTTATGATGTTAGCTT
                      ____________________________________________________________
consensus             GTGTAAAGGCGCTAGGGGAGATCGTACGACGAGGGTCTGAGACATTTATGATGTTAGCTT
 
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JMSF037N11+           CTACTTCCACTGAGACTGCTTGTTTGAGACTTTGATTGTTCCGAAAGCAATAGGAGGAGG
                      ____________________________________________________________
consensus             CTACTTCCACTGAGACTGCTTGTTTGAGACTTTGATTGTTCCGAAAGCAATAGGAGGAGG
 
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JMSF037N11+           CGGCGGGCGGCGGGCGGCGGTGGGGGTGGTGGTGAAGAATTACAAATTTTGGAGCTATCC
                      ____________________________________________________________
consensus             CGGCGGGCGGCGGGCGGCGGTGGGGGTGGTGGTGAAGAATTACAAATTTTGGAGCTATCC