Contig 013467:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN005G04Sequence531013467 (6)ref|XP_008220169.1|2e-81PREDICTED: uroporphyrinogen-III synthase, chloroplastic isoform X3 [Prunus mume
JMFN009O12Sequence627013467 (6)ref|XP_008220168.1|1e-102PREDICTED: uroporphyrinogen-III synthase, chloroplastic isoform X2 [Prunus mume
JMFS045B12Sequence613013467 (6)ref|XP_010320354.1|6e-78PREDICTED: uroporphyrinogen-III synthase, chloroplastic [Solanum lycopersicum]
JMSF036M12Sequence673013467 (6)ref|XP_010320354.1|3e-93PREDICTED: uroporphyrinogen-III synthase, chloroplastic [Solanum lycopersicum] 725013467 (6)ref|XP_002282338.2|5e-53PREDICTED: uroporphyrinogen-III synthase, chloroplastic isoform X2 [Vitis vinif
JMSF038M12Sequence516013467 (6)ref|XP_009607743.1|6e-15PREDICTED: uroporphyrinogen-III synthase, chloroplastic isoform X2 [Nicotiana t

Alignment

This contig is upended


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rJMSF038M12-             GAAGGCAACCGAATGCCAAATAGGGTGGACGACGCGTAACATGATTTTTCGAAAGAT
rJMSF036M12-                                                  AACATGATTTTTCGAAAGAT
                      ____________________________________________________________
consensus                GAAGGCAACCGAATGCCAAATAGGGTGGACGACGCGTAACATGATTTTTCGAAAGAT
 
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rJMSF038M12-          AAAGAAGGAACTATCCTAAAGGTTTAACTGAATACAGANCNAAACATTCANTTGTANATG
rJMSF036M12-          AAAGAAGGAACTATCCTAAA-GTTTAACTGAATACAGATCTAAACATTCAATTGTACATG
                      ____________________________________________________________
consensus             AAAGAAGGAACTATCCTAAAGGTTTAACTGAATACAGATCTAAACATTCAATTGTACATG
 
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rJMSF038M12-          GTCAAGCCTGCGATATCTCAGTTAGAACTCGACAGANCCACGGGGGATATCTGCNCTCAC
rJMSF036M12-          GTCAAGCCTGCGATATCTCAGTTAGAACTCGACAGAACCACGTGGGATATCTGCACTCAC
                      ____________________________________________________________
consensus             GTCAAGCCTGCGATATCTCAGTTAGAACTCGACAGAACCACGTGGGATATCTGCACTCAC
 
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rJMSF038M12-          GCAGCAGAATGNCCTGCTGAAACATATATATACAGCTGAAGATATCCTGAANAAACATAA
rJMSF036M12-          GCAGCAGAATGACCTGCTGAAACATATATATACAGCTGAAGATATCCTGAAAAAACATAA
                      ____________________________________________________________
consensus             GCAGCAGAATGACCTGCTGAAACATATATATACAGCTGAAGATATCCTGAAAAAACATAA
 
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rJMSF038M12-          TTCCAGCCAATGCTTTTATTGCCTCGTCGGCAAACTCCCTGCCNGATTAACATCTAGGAA
rJMSF036M12-          TTCCAGCCAATGCTTTTATTGCCTCGTCGGCAAACTCCCTGCCAGATTAACATCTAGGAA
                      ____________________________________________________________
consensus             TTCCAGCCAATGCTTTTATTGCCTCGTCGGCAAACTCCCTGCCAGATTAACATCTAGGAA
 
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rJMSF038M12-          CACAGAAGCATACAACATTTAATTTTTATACNCCCTACATTTTCTCANGGACTCCCAAGG
rJMSF036M12-          CACAGAAG-ATACAACATTTAATTTTTATACACCCTACATTTTCTCAAGGACTCCCAAGG
                      ____________________________________________________________
consensus             CACAGAAGCATACAACATTTAATTTTTATACACCCTACATTTTCTCAAGGACTCCCAAGG
 
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rJMSF038M12-          NCTCGAGAATGCTANCAACCCNCCCATCANGACCAGGATTTTCCGGATGATATACNTTCC
rJMSF036M12-          CCTCAAGAATGCTATCAACCCACCCATCAAGACCAGGATTTTCCGGATGATATACATTCC
JMFN009O12+                AGAATGCTATCAACCCACCCATCAAGACCAGGATTTTCCGGATGATATACATTCC
                      ____________________________________________________________
consensus             CCTCGAGAATGCTATCAACCCACCCATCAAGACCAGGATTTTCCGGATGATATACATTCC
 
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rJMSF038M12-          TCAGTCCTAGTCTTTTANCTGCCAAAGCANNTGTTTCACCGATGCATGCTATTGCATTGC
rJMSF036M12-          TCAGTCCTAGTCTTTTAGCTGCCAAAGCAGTTGTTTCACCGATGCATGCTATTGCATTGC
JMFN005G04+                                CCAAAGCAGTTGTTTCACGGATGCATGCTATTGCATTGC
JMFN009O12+           TCAGTCCTAGTCTTTTAGCTGCCAAAGCAGTTGTTTCACCGATGCATGCTATTGCATTGC
                      ____________________________________________________________
consensus             TCAGTCCTAGTCTTTTAGCTGCCAAAGCAGTTGTTTCACCGATGCATGCTATTGCATTGC
 
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rJMSF038M12-          CCCACTCTT-CNAATGCTGGAACAAGATTAGCCCATGC                      
rJMSF036M12-          CCCACTCTT-CCAATGCTGGAACAAGATTAGCCCATGCACGAATGGCAGAAGGTGATGCT
JMFN005G04+           CCCACTCTTACAAATGCTGGAACAAGATTAGCCCATGCATGAATGGCAGAAGGTGATGTT
JMFN009O12+           CCCACTCTT-CCAATGCTGGAACAAGATTAGCCCATGCACGAATGGCAGAAGGTGATGCT
                      ____________________________________________________________
consensus             CCCACTCTT-CCAATGCTGGAACAAGATTAGCCCATGCACGAATGGCAGAAGGTGATGCT
 
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rJMSF036M12-          ACTGCAACAACAGGAGCACATAGTGCTATTTTAAGAAGTGCCTCATCAACATGTTGGATG
JMFN005G04+           ACTGCAACAACAGGAGCACATAGTGCTATTTTAAGAAGTGCCTCATCAACATGTTGGATG
JMFN009O12+           ACTGCAACAACAGGAGCACATAGTGCTATTTTAAGAAGTGCCTCATCAACATGTTGGATG
JMSF036M12+                                                       ATCAACATGTTGGATG
                      ____________________________________________________________
consensus             ACTGCAACAACAGGAGCACATAGTGCTATTTTAAGAAGTGCCTCATCAACATGTTGGATG
 
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rJMSF036M12-          GGTGCCGTAGTGTATGTATTCAACCGAGTAACCTCAAATCCACGCTTTGAAAGGCCTTCC
JMFN005G04+           GGTGCCGTAGTGTATGTATTCAACCGAGTAACCTCAAATCCACGCTTTGAAAGGCCTTCC
JMFN009O12+           GGTGCCGTAGTGTATGTATTCAACCGAGTAACCTCAAATCCACGCTTTGAAAGGCCTTCC
JMFS045B12+                                                     CGCTTTGAAAGGCCTTCC
JMSF036M12+           GGTGCCGTAGTGTATGTATTCAACCGAGTAACCTCAAATCCACGCTTTGAAAGGCCTTCC
                      ____________________________________________________________
consensus             GGTGCCGTAGTGTATGTATTCAACCGAGTAACCTCAAATCCACGCTTTGAAAGGCCTTCC
 
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rJMSF036M12-          TCAATCTCACCACTGGCTTTTGCTGAAGCAGGATATAGAACAGTACATCTTTTGNTCTCT
JMFN005G04+           TCAATCTCACCACTGGCTTTTGCTGAAGCAGGATATAGAACAGTACATCTTTTGTTCTCT
JMFN009O12+           TCAATCTCACCACTGGCTTTTGCTGAAGCAGGATATAGAACAGTACATCTTTTGTTCTCT
JMFS045B12+           TCAATCTCACCACTGGCTTTTGCTGAAGCAGGATATAGAACAGTACATCTTTTGTTCTCT
JMSF036M12+           TCAATCTCACCACTGGCTTTTGCTGAAGCAGGATATAGAACAGTACATCTTTTGTTCTCT
                      ____________________________________________________________
consensus             TCAATCTCACCACTGGCTTTTGCTGAAGCAGGATATAGAACAGTACATCTTTTGTTCTCT
 
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rJMSF036M12-          TGCTTAGGAAGCTCTAAAGCTA                                      
JMFN005G04+           TGCTTAGGAAGCTCTAAAGCTAAAACCTTGCCAGTTGCTTTGGATGGTGCAAAGGCAACA
JMFN009O12+           TGCTTAGGAAGCTCTAAAGCTAAAACCTTGCCAGTTGCTTTGGATGGTGCAAAGGCAACA
JMFS045B12+           TGCTTAGGAAGCTCTAAAGCTAAAACCTTGCCAGTTGCTTTGGATGGTGCAAAGGCAACA
JMSF036M12+           TGCTTAGGAAGCTCTAAAGCTAAAACCTTGCCAGTTGCTTTGGATGGTGCAAAGGCAACA
                      ____________________________________________________________
consensus             TGCTTAGGAAGCTCTAAAGCTAAAACCTTGCCAGTTGCTTTGGATGGTGCAAAGGCAACA
 
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JMFN005G04+           TCAAGATACCGCTTTGATGACTGAGTAACTTCATCAAATATGCTAGCTGTACCAGCCCCA
JMFN009O12+           TCAAGATACCGCTTTGATGACTGAGTAACTTCATCAAATATGCTAGCTGTACCAGCCCCA
JMFS045B12+           TCAAGATACCGCTTTGATGACTGAGTAACTTCATCAAATATGCTAGCTGTACCAGCCCCA
JMSF036M12+           TCAAGATACCGCTTTGATGACTGAGTAACTTCATCAAATATGCTAGCTGTACCAGCCCCA
                      ____________________________________________________________
consensus             TCAAGATACCGCTTTGATGACTGAGTAACTTCATCAAATATGCTAGCTGTACCAGCCCCA
 
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JMFN005G04+           ACAACAGCAATTCTGACATTTGGGGTTCCAGCAACCTTCCAAGCATCAAGAAAAACCAGA
JMFN009O12+           ACAACAGCAATTCTGACATTTGGGGTTCCAGCAACCTTCCAAGCATCAAGAAAAACCAGA
JMFS045B12+           ACAACAGCAATTCTGACATTTGGGGTTCCAGCAACCTTCCAAGCATCAAGAAAAACCAGA
JMSF036M12+           ACAACAGCAATTCTGACATTTGGGGTTCCAGCAACCTTCCAAGCATCAAGAAAAACCAGA
                      ____________________________________________________________
consensus             ACAACAGCAATTCTGACATTTGGGGTTCCAGCAACCTTCCAAGCATCAAGAAAAACCAGA
 
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JMFN005G04+           CCAGCCTCTGGTGAAGTTATGACAATCCAGTCAAAGGTGTTTT---GACTCAACACCGAA
JMFN009O12+           CCAGCCTCTGGTGAAGTTATGACAATCCAGTCAAAGGTGTTTTCTGGACTCAACACCGAA
JMFS045B12+           CCAGCCTCTGGTGAAGTTATGACAATCCAGTCAAAGGTGTTTT---GACTCAACACCGAA
JMSF036M12+           CCAGCCTCTGGTGAAGTTATGACAATCCAGTCAAAGGTGTTTT---GACTCAACACCGAA
                      ____________________________________________________________
consensus             CCAGCCTCTGGTGAAGTTATGACAATCCAGTCAAAGGTGTTTT---GACTCAACACCGAA
 
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JMFN005G04+           GGAAGCCTATCCAAA                                             
JMFN009O12+           GGAAGCCTATCCAAATCAGGTAGGTGAGTGTGT                           
JMFS045B12+           GGAAGCCTATCCAAATCAGGTAGGTGCGTGTGTTGTATGAGAGGAAGCTCAAGACAACCA
JMSF036M12+           GGAAGCCTATCCAAATCAGGTAGGTGCGTGTGTTGTATGAGAGGAAGCTCAAGACAACCA
                      ____________________________________________________________
consensus             GGAAGCCTATCCAAATCAGGTAGGTGCGTGTGTTGTATGAGAGGAAGCTCAAGACAACCA
 
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JMFS045B12+           ATCCCATGTATTGCCAAAGCCTTGATGAGTTTGCCGTTCTTGCCGCGTTCTCTGGTGACG
JMSF036M12+           ATCCCATGTATTGCCAAAGCCTTGATGAGTTTGCCGTTCTTGCCGCGTTCTCTGGTGACG
                      ____________________________________________________________
consensus             ATCCCATGTATTGCCAAAGCCTTGATGAGTTTGCCGTTCTTGCCGCGTTCTCTGGTGACG
 
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JMFS045B12+           ACAACTGCCGGCTGCTTGGAAGATGAAGCCGAGGAGACTAAAGGATCAGAAGATTCAATT
JMSF036M12+           ACAACTGCCGGCTGCTTGGAAGATGAAGCCGAGGAGACTAAAGGATCAGAAGATTCAATT
                      ____________________________________________________________
consensus             ACAACTGCCGGCTGCTTGGAAGATGAAGCCGAGGAGACTAAAGGATCAGAAGATTCAATT
 
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JMFS045B12+           CTAACGCAGCGAGGAGAGATTTTGCTCCGGTGGACTTGCAGACGAGTGGTAGAGGGACGT
JMSF036M12+           CTAACGCAGCGAGGAGAGATTTTGCTCCGGTGGACTTGCAGACGAGTGGTAGAGGGACGT
                      ____________________________________________________________
consensus             CTAACGCAGCGAGGAGAGATTTTGCTCCGGTGGACTTGCAGACGAGTGGTAGAGGGACGT
 
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JMFS045B12+           GAGGGAGGAGGAAGAGGAGAGAGAAAGGAGAGCGAAAGCTGAGGCATGACGACGGTAA  
JMSF036M12+           GAGGGAGGAGGAAGAGGAGAGAGAAAGGAGAGCGAAAGCTGAGGCATGACGACGGTAACC
                      ____________________________________________________________
consensus             GAGGGAGGAGGAAGAGGAGAGAGAAAGGAGAGCGAAAGCTGAGGCATGACGACGGTAACC