Contig 013455:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF040C23+                                                  TTGCTATCAGCAAGAGAATTG
                      ____________________________________________________________
consensus                                                    TTGCTATCAGCAAGAGAATTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF040C23+           ATTCTGTGAGGATTGGCGTTTGAGGCCAAGATTGGAGCTTCCTCGAGCAATATGGGTTCA
                      ____________________________________________________________
consensus             ATTCTGTGAGGATTGGCGTTTGAGGCCAAGATTGGAGCTTCCTCGAGCAATATGGGTTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF040C23+           TTCAAGTCAGCAAGACGATTGGTCCTCTTTGAGAACTCGAGATATCTGTCTTCATCACCA
JMFF021P11+                                        TGAGAACTCGAGATATCTGTCTTCATCACCA
                      ____________________________________________________________
consensus             TTCAAGTCAGCAAGACGATTGGTCCTCTTTGAGAACTCGAGATATCTGTCTTCATCACCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF040C23+           GCCCGTGGAATTTCTTTGTCTCGGGAGGAGAAATGACTAGCCCGGTTTTCGCCTTTTATG
JMFF021P11+           GCCCGTGGAATTTCTTTGTCTCGGGAGGAGAAATGACTAGCCCGGTTTTCGCCTTTTATG
                      ____________________________________________________________
consensus             GCCCGTGGAATTTCTTTGTCTCGGGAGGAGAAATGACTAGCCCGGTTTTCGCCTTTTATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF040C23+           AATTCAAACGGAGACCGACTGTAACTGGGAGGAGGAGCGTGAGACAACAAGTGCCCGAAA
JMFF021P11+           AATTCAAACGGAGACCGACTGTAACTGGGAGGAGGAGCGTGAGACAACAAGTGCCCGAAA
                      ____________________________________________________________
consensus             AATTCAAACGGAGACCGACTGTAACTGGGAGGAGGAGCGTGAGACAACAAGTGCCCGAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF040C23+           CGAAAGGTCTCAGCTTTCATCGAATTCCTTTGCAGTTCTCTCGTTTTCAACTCACTCATA
JMFF021P11+           CGAAAGGTCTCAGCTTTCATCGAATTCCTTTGCAGTTCTCTCGTTTTCAACTCACTCATA
                      ____________________________________________________________
consensus             CGAAAGGTCTCAGCTTTCATCGAATTCCTTTGCAGTTCTCTCGTTTTCAACTCACTCATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF040C23+           AGTTCCATCTGCCTCCTGTGAAGGCGATGCAGTTCTTGAAGCTGGTGCCTGAATATCGAT
JMFF021P11+           AGTTCCATCTGCCTCCTGTGAAGGCGATGCAGTTCTTGAAGCTGGTGCCTGAATATCGAT
                      ____________________________________________________________
consensus             AGTTCCATCTGCCTCCTGTGAAGGCGATGCAGTTCTTGAAGCTGGTGCCTGAATATCGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF040C23+           TCATGCTTCAAAATCGTCTGCCTCACTTTCTCCTTGTCGTATTCAAAGTATCCATCCACA
JMFF021P11+           TCATGCTTCAAAATCGTCTGCCTCACTTTCTCCTTGTCGTATTCAAAGTATCCATCCACA
                      ____________________________________________________________
consensus             TCATGCTTCAAAATCGTCTGCCTCACTTTCTCCTTGTCGTATTCAAAGTATCCATCCACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF040C23+           GGCACAGGCACGCATGATGCGAAAAAGTCGAAATGCTGAACACTTCTTAGCGTTTGTTCT
JMFF021P11+           GGCACAGGCACGCATGATGCGAAAAAGTCGAAATGCTGAACACTTCTTAGCGTTTGTTCT
                      ____________________________________________________________
consensus             GGCACAGGCACGCATGATGCGAAAAAGTCGAAATGCTGAACACTTCTTAGCGTTTGTTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF040C23+           TCATGATTTAGTAAAGACACCCTATTATTAACGTGGCCATTCAGATCCTTTACAGAGTAA
JMFF021P11+           TCATGATTTAGTAAAGACACCCTATTATTAACGTGGCCATTCAGATCCTTTACAGAGTAA
JMSF035D16+                                                       ATCCTTTACAGAGTAA
                      ____________________________________________________________
consensus             TCATGATTTAGTAAAGACACCCTATTATTAACGTGGCCATTCAGATCCTTTACAGAGTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF040C23+           AACGCTGGCAAATACGTCTTACATTGTATCT                             
JMFF021P11+           AACGCTGGCAAATACGTCTTACATTGTATCT                             
JMSF035D16+           AACGCTGGCAAATACGTCTTACATTGTATCTTAGTTCCCATTCCTAGCCACCCAGTTCTT
                      ____________________________________________________________
consensus             AACGCTGGCAAATACGTCTTACATTGTATCTTAGTTCCCATTCCTAGCCACCCAGTTCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF035D16+           CTGCAGTTGTGCTATACCCTCTCAAAAGTGCAATATTTTCTGAGCCCAACAACAACCTCA
                      ____________________________________________________________
consensus             CTGCAGTTGTGCTATACCCTCTCAAAAGTGCAATATTTTCTGAGCCCAACAACAACCTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF035D16+           ACAAGAAAGACAAGACCTCCGAGACCCAAAACCAGAAAGCTGCAATCTTTGTACCTTGGC
                      ____________________________________________________________
consensus             ACAAGAAAGACAAGACCTCCGAGACCCAAAACCAGAAAGCTGCAATCTTTGTACCTTGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF035D16+           GGCCATTGAAGAACACAACCTTAAAAAAGATGATCTGCACAAGAAAACAACCCAGAAACA
                      ____________________________________________________________
consensus             GGCCATTGAAGAACACAACCTTAAAAAAGATGATCTGCACAAGAAAACAACCCAGAAACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF035D16+           AATCCCCATCTGTTGGGCCACTCTCTGATCAACCAAAAGCAGGCACAGTAACAGAACCTA
                      ____________________________________________________________
consensus             AATCCCCATCTGTTGGGCCACTCTCTGATCAACCAAAAGCAGGCACAGTAACAGAACCTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF035D16+           GATAAACATTTCTCTCTTCTCTCTCTCTCTACACAAAATCAAGCCTTTGAGAAGAACAAT
                      ____________________________________________________________
consensus             GATAAACATTTCTCTCTTCTCTCTCTCTCTACACAAAATCAAGCCTTTGAGAAGAACAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF035D16+           GACTTGAAAATTGTCAACATCTTCTTTTATCTTTTATGGGAGTATAGTACAACTTTCTCT
                      ____________________________________________________________
consensus             GACTTGAAAATTGTCAACATCTTCTTTTATCTTTTATGGGAGTATAGTACAACTTTCTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF035D16+           TTCGCCCTATGGGGCATCTTGATTCGCTCTATTCTTCTCTCTCTCCCCCATTCTTTTCTT
                      ____________________________________________________________
consensus             TTCGCCCTATGGGGCATCTTGATTCGCTCTATTCTTCTCTCTCTCCCCCATTCTTTTCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF035D16+           TCTCTCCTCTCCAAAATGGCAATCTGATAGAGTGATAGATATATATCACAACAACGCATC
                      ____________________________________________________________
consensus             TCTCTCCTCTCCAAAATGGCAATCTGATAGAGTGATAGATATATATCACAACAACGCATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF035D16+           TACCGAATAAAATAATGGGGAGAAAAAATCAAAGATTTTCTGTGCTTGCGAAGAAGTGAA
                      ____________________________________________________________
consensus             TACCGAATAAAATAATGGGGAGAAAAAATCAAAGATTTTCTGTGCTTGCGAAGAAGTGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF035D16+           GGAAGGACATGGGTATTTGTAGCTCATTTTCTAGATTCTGTCTCTGCCTCCTCTTTTCCC
                      ____________________________________________________________
consensus             GGAAGGACATGGGTATTTGTAGCTCATTTTCTAGATTCTGTCTCTGCCTCCTCTTTTCCC