| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN001A04 | Sequence | 591 | 013454 (5) | ref|XP_006467746.1| | 2e-33 | PREDICTED: protein DEHYDRATION-INDUCED 19-like [Citrus sinensis] | |||||
| JMSF033P24 | Sequence | 632 | 013454 (5) | gb|KDO77671.1| | 2e-69 | hypothetical protein CISIN_1g026857mg [Citrus sinensis] gb|KDO77672.1| hypotheti | 633 | 013454 (5) | ref|XP_006467746.1| | 1e-19 | PREDICTED: protein DEHYDRATION-INDUCED 19-like [Citrus sinensis] |
| JMSF034P24 | Sequence | 658 | 013454 (5) | gb|KDO77671.1| | 8e-83 | hypothetical protein CISIN_1g026857mg [Citrus sinensis] gb|KDO77672.1| hypotheti | 581 | 013454 (5) | ref|XP_006364291.1| | 6e-21 | PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 4-like isoform X1 [Solanum tu |
This contig is upended
. : . : . : . : . : . :
rJMSF034P24- GTGCAGACCTTAAAAATCCTCTTAAA
rJMSF033P24- GATAACATTTCTGCCAAGGTGCAGACCTTAAAAATCCTCTTAAA
____________________________________________________________
consensus GATAACATTTCTGCCAAGGTGCAGACCTTAAAAATCCTCTTAAA
. : . : . : . : . : . :
rJMSF034P24- GTTTACAGATTTACAGAATTACAGTGGCAACCTCAACTAAGTATAAATTCCAAACAAAAA
rJMSF033P24- GTTTACAGATTTACAGAATTACAGTGGCAACCTCAACTAAGTATAAATTCCAAACAAAAA
JMFN001A04+ AAAA
____________________________________________________________
consensus GTTTACAGATTTACAGAATTACAGTGGCAACCTCAACTAAGTATAAATTCCAAACAAAAA
. : . : . : . : . : . :
rJMSF034P24- GTTGGAAAGAAAATACAGTGAGGATGTTGATTTTTACAGTTATGATTAGGGACAACACCT
rJMSF033P24- GTTGGAAAGAAAATACAGTGAGGATGTTGATTTTTACAGTTATGATTAGGGACAACACCT
JMFN001A04+ GTTGGAAAGAAAATACAGTGAGGATGTTGATTTTTACAGTTATGATTAGGGACAACACCT
____________________________________________________________
consensus GTTGGAAAGAAAATACAGTGAGGATGTTGATTTTTACAGTTATGATTAGGGACAACACCT
. : . : . : . : . : . :
rJMSF034P24- CTTGTTGGGAGGATTCTGGGAATTATACATCAGTAATATATGACTTTGAGACGAGGCATG
rJMSF033P24- CTTGTTGGGAGGATTCTGGGAATTATACATCAGTAATATATGACTTTGAGACGAGGCATG
JMFN001A04+ CTTGTTGGGAGGATTCTGGGAATTATACATCAGTAATATATGACTTTGAGACGAGGCATG
____________________________________________________________
consensus CTTGTTGGGAGGATTCTGGGAATTATACATCAGTAATATATGACTTTGAGACGAGGCATG
. : . : . : . : . : . :
rJMSF034P24- TGCCGGGTTGTTTAATACACCAAATTATTTTAACCCAGCGAGATCACCCCTTTTATCTGA
rJMSF033P24- TGCCGGGTTGTTTAATACACCAAATTATTTTAACCCAGCGAGATCACCCCTTTTATCTGA
JMFN001A04+ TGCCGGGTTGTTTAATACACCAAATTATTTTAACCCAGCGAGATCACCCCTTTTATCTGA
____________________________________________________________
consensus TGCCGGGTTGTTTAATACACCAAATTATTTTAACCCAGCGAGATCACCCCTTTTATCTGA
. : . : . : . : . : . :
rJMSF034P24- ATCTATATTGTTCAGTCACTATTATTTGCAAAATTCAAACTTACTGGTATTTGTCAGCTA
rJMSF033P24- ATCTATATTGTTCAGTCACTATTATTTGCAAAATTCAAACTTACTGGTATTTGTCAGCTA
JMFN001A04+ ATCTATATTGTTCAGTCACTATTATTTGCAAAATTCAAACTTACTGGTATTTGTCAGCTA
____________________________________________________________
consensus ATCTATATTGTTCAGTCACTATTATTTGCAAAATTCAAACTTACTGGTATTTGTCAGCTA
. : . : . : . : . : . :
rJMSF034P24- ACAAAGTCGAGGCAAGCATATCCTGGATAAAAAAAGCTCTTCCAGTGGCTTGCTCTATCC
rJMSF033P24- ACAAAGTCGAGGCAAGCATATCCTGGATAAAAAAAGCTCTTCCAGTGGCTTGCTCTATCC
JMFN001A04+ ACAAAGTCGAGGCAAGCATATCCTGGATAAAAAAAGCTCTTCCAGTGGCTTGCTCTATCC
____________________________________________________________
consensus ACAAAGTCGAGGCAAGCATATCCTGGATAAAAAAAGCTCTTCCAGTGGCTTGCTCTATCC
. : . : . : . : . : . :
rJMSF034P24- TTTTTTCTCGCTCTTCATAACTTAGCGATGGATCCAAACTTAACTTCCATATGTGTTCAG
rJMSF033P24- TTTTTTCTCGCTCTTCATAACTTAGCGATGGATCCAAACTTAACTTCCATATGTGTTCAG
JMFN001A04+ TTTTTTCTCGCTCTTCATAACTTAGCGATGGATCCAAACTTAACTTCCATATGTGTTCAG
JMSF033P24+ GATCCAAACTTAACTTCCATATGTGTTCAG
JMSF034P24+ TTTTCTCGCTCTTCATAACTTAGCGATGGATCCAAACTTAACTTCCATATGTGTTCAG
____________________________________________________________
consensus TTTTTTCTCGCTCTTCATAACTTAGCGATGGATCCAAACTTAACTTCCATATGTGTTCAG
. : . : . : . : . : . :
rJMSF034P24- ATCCCGCACTCTTTGTAGGACTGTCCTCAATACTGGATACCACAGATTTTGAAATTTCTT
rJMSF033P24- ATCCCGCACTCTTTGTAGGACTGTCCTCAATACTGGATACCACAGATTTTGAAATTTCTT
JMFN001A04+ ATCCCGCACTCTTTGTAGGACTGTCCTCAATACTGGATACCACAGATTTTGAAATTTCTT
JMSF033P24+ ATCCCGCACTCTTTGTAGGACTGTCCTCAATACTGGATACCACAGATTNTGAAATTTCTT
JMSF034P24+ ATCCCGCACTCTTTGTAGGACTGTCCTCAATACTGGATACCACAGATTTTGAAATTTCTT
____________________________________________________________
consensus ATCCCGCACTCTTTGTAGGACTGTCCTCAATACTGGATACCACAGATTTTGAAATTTCTT
. : . : . : . : . : . :
rJMSF034P24- CGACTTCAGACCCGGGGAAGTTGAGCACAAGAGACGAGAGGAAGGGATCACTAGGGGCAC
rJMSF033P24- CGACTTCAGACCCGGGGAAGTTGAGCACAAGAGACGAGAGGAAGGGATCACTAGGGGCAC
JMFN001A04+ CGACTTCAGACCCGGGGAAGTTGAGCACAAGAGACGAGAGGAAGGGATCACTAGGGGCAC
JMSF033P24+ CGACTTCAGACCCGGGGAAGTTGAGCACAAGAGACGAGAGGAAGGGATCACTAGGGGCAC
JMSF034P24+ CGACTTCAGACCCGGGGAAGTTGAGCACAAGAGACGAGAGGAAGGGATCACTAGGGGCAC
____________________________________________________________
consensus CGACTTCAGACCCGGGGAAGTTGAGCACAAGAGACGAGAGGAAGGGATCACTAGGGGCAC
. : . : . : . : . : . :
rJMSF034P24- TA
rJMSF033P24- TAGATGAAGTTGCGGTGTTTGATCGATACCCGCTGCCTCCTAAAAGCAC
JMFN001A04+ TAGATGAAGTTGCGGTGTTTGATCGATACCCGCTGCCTCCTAGAAGCACCTGTAGATGGG
JMSF033P24+ TAGATGAAGTTGCGGTGTTTGATCGATACCCGCTGCCTCCTAGAAGCACCTGTAGATGGG
JMSF034P24+ TAGATGAAGTTGCGGTGTTTGATCGATACCCGCTGCCTCCTAGAAGCACCTGTAGATGGG
____________________________________________________________
consensus TAGATGAAGTTGCGGTGTTTGATCGATACCCGCTGCCTCCTAGAAGCACCTGTAGATGGG
. : . : . : . : . : . :
JMFN001A04+ CTTCCCGAAGATCCCTTCCTAATAAAGAAAGTGCCTGACTGCTGGGA
JMSF033P24+ CTTCCCGAAGATCCCTTCCTAATAAAGAAAGTGCCTGACTGCTGGGAATCGCAACCCTGC
JMSF034P24+ CTTCCCGAAGATCCCTTCCTAATAAAGAAAGTGCCTGACTGCTGGGAATCGCAACCCTGC
____________________________________________________________
consensus CTTCCCGAAGATCCCTTCCTAATAAAGAAAGTGCCTGACTGCTGGGAATCGCAACCCTGC
. : . : . : . : . : . :
JMSF033P24+ GTAACCTCCGACGGCGCTGCAACTTGAGCAATTGTCCGTGCTGCAGTGTGATATGGCTTA
JMSF034P24+ GTAACCTCCGACGGCGCTGCAACTTGAGCAATTGTCCGTGCTGCAGTGTGATATGGCTTA
____________________________________________________________
consensus GTAACCTCCGACGGCGCTGCAACTTGAGCAATTGTCCGTGCTGCAGTGTGATATGGCTTA
. : . : . : . : . : . :
JMSF033P24+ ACATGTCCCTCGAAACTTTAACAGAACAAATGGGACAAATGGTGACTTTGGACTCGCAAG
JMSF034P24+ ACATGTCCCTCGAAACTTTAACAGAACAAATGGGACAAATGGTGACTTTGGACTCGCAAG
____________________________________________________________
consensus ACATGTCCCTCGAAACTTTAACAGAACAAATGGGACAAATGGTGACTTTGGACTCGCAAG
. : . : . : . : . : . :
JMSF033P24+ AATGCTCGTCTTCCAGATGGGAGCAAAGGGAGGTAATATCGAAGTCCTCATAACAATACG
JMSF034P24+ AATGCTCGTCTTCCAGATGGGAGCAAAGGGAGGTAATATCGAAGTCCTCATAACAATACG
____________________________________________________________
consensus AATGCTCGTCTTCCAGATGGGAGCAAAGGGAGGTAATATCGAAGTCCTCATAACAATACG
. : . : . : . : . : . :
JMSF033P24+ GGCATGGGAAATCGGGTCGGGCCTNTTNTTCAACCTCGAAATCATCTA
JMSF034P24+ GGCATGGGAAATCGGGTCGGGCCTCTTCTTCAACCTCGAAATCATCTAAGCTCAGCCGAT
____________________________________________________________
consensus GGCATGGGAAATCGGGTCGGGCCTCTTCTTCAACCTCGAAATCATCTAAGCTCAGCCGAT
. : . : . : . : . : . :
JMSF034P24+ CCAATTGAGAGGTGTTGTTATGGTAGTATGTGTGATGGTGATGCTGCAAATTGAATTGCC
____________________________________________________________
consensus CCAATTGAGAGGTGTTGTTATGGTAGTATGTGTGATGGTGATGCTGCAAATTGAATTGCC
. : . : . : . : . : . :
JMSF034P24+ GCTTGGCAGCTGCGAGGCGAGAGGTCCAGAAATCAGTATCCATGAATGAGAGAAACGGTC
____________________________________________________________
consensus GCTTGGCAGCTGCGAGGCGAGAGGTCCAGAAATCAGTATCCATGAATGAGAGAAACGGTC