Contig 013451:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF023D03Sequence473013451 (5)ref|XP_011088848.1|3e-12PREDICTED: nucleobase-ascorbate transporter 12 [Sesamum indicum]712013711 (6)emb|CAN68724.1|2e-80hypothetical protein VITISV_033683 [Vitis vinifera]
JMFF034N03Sequence504013451 (5)ref|XP_009587588.1|2e-14PREDICTED: nucleobase-ascorbate transporter 12 [Nicotiana tomentosiformis]748013711 (6)emb|CAN68724.1|9e-97hypothetical protein VITISV_033683 [Vitis vinifera]
JMSF016G11Sequence486013451 (5)ref|XP_011088848.1|2e-12PREDICTED: nucleobase-ascorbate transporter 12 [Sesamum indicum]764013711 (6)emb|CAN68724.1|2e-98hypothetical protein VITISV_033683 [Vitis vinifera]
JMSF016L07Sequence471013451 (5)ref|XP_011088848.1|5e-13PREDICTED: nucleobase-ascorbate transporter 12 [Sesamum indicum]789013711 (6)emb|CAN68724.1|1e-104hypothetical protein VITISV_033683 [Vitis vinifera]
JMSF034M24Sequence653013451 (5)ref|XP_009765092.1|3e-23PREDICTED: nucleobase-ascorbate transporter 12 [Nicotiana sylvestris]607013711 (6)emb|CAN68724.1|1e-81hypothetical protein VITISV_033683 [Vitis vinifera]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF034M24+                  CTCGGCTGCTGCCCACCAGCAGCCGTCGTTGCTGGCTCAGTGCCAGTCACCGC
                      ____________________________________________________________
consensus                    CTCGGCTGCTGCCCACCAGCAGCCGTCGTTGCTGGCTCAGTGCCAGTCACCGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF034M24+           CTGTCCATTAGCTACGGTACTCTTCGGCGCGCCGCCGCCGTCAGAATCCCTCCGCTTCCT
                      ____________________________________________________________
consensus             CTGTCCATTAGCTACGGTACTCTTCGGCGCGCCGCCGCCGTCAGAATCCCTCCGCTTCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF034N03+                     TCCTTCTCCGGCCGCTGCGGCTTCTCATTCGCCTGCTCCCCGTTAGCTTT
JMSF016L07+                                                            CCGTTAGCTTT
JMSF016G11+                                                            CCGTTAGCTTT
JMSF034M24+           CACCGGATGATCCTTCTCCGGCTGCTGCGGCTTCTCATTCGCCTGCTCCCCGTTAGCTTT
                      ____________________________________________________________
consensus             CACCGGATGATCCTTCTCCGGCTGCTGCGGCTTCTCATTCGCCTGCTCCCCGTTAGCTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF034N03+           CTCCGGCCTAGCCCTCCCCGCTTCGAGATCCAGACTAGAATCCACCCCCCTGGTCCGCGC
JMFF023D03+            TCCGGCCTAGCCCTCCCCGCTTCGAGATCCAGACTAGAATCCACCCCCCTGGTCCGCGC
JMSF016L07+           CTCCGGCCTAGCCCTCCCCGCTTCGAGATCCAGACTAGAATCCACCCCCCTGGTCCGCGC
JMSF016G11+           CTCCGGCCTAGCCCTCCCCGCTTCGAGATCCAGACTAGAATCCACCCCCCTGGTCCGCGC
JMSF034M24+           CTCCGGCCTAGCCCTCCCCGCTTCGAGATCCAGACTAGAATCCACCCCCCTGGTCCGCGC
                      ____________________________________________________________
consensus             CTCCGGCCTAGCCCTCCCCGCTTCGAGATCCAGACTAGAATCCACCCCCCTGGTCCGCGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF034N03+           GGGGGCTTGAGCCTGGGGTTGATCTTGCGGCCGGGGCGCAATTTGGCCGGAGTTACTGGC
JMFF023D03+           GGGGGCTTGAGCCTGGGGTTGATCTTGCGGCCGGGGCGCAATTTGGCCGGAGTTACTGGC
JMSF016L07+           GGGGGCTTGAGCCTGGGGTTGATCTTGCGGCCGGGGCGCAATTTGGCCGGAGTTACTGGC
JMSF016G11+           GGGGGCTTGAGCCTGGGGTTGATCTTGCGGCCGGGGCGCAATTTGGCCGGAGTTACTGGC
JMSF034M24+           GGGGGCTTGAGCCTGGGGTTGATCTTGCGGCAGGGGCGCAATTTGGCCGGAGTTACTGGC
                      ____________________________________________________________
consensus             GGGGGCTTGAGCCTGGGGTTGATCTTGCGGCCGGGGCGCAATTTGGCCGGAGTTACTGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF034N03+           ATTGGTCTCTCCGGAGAACTTGGGGCGAAATCCAGTCCGCTTTGCCCAGGTAGTCGGCGG
JMFF023D03+           ATTGGTCTCTCCGGAGAACTTGGGGCGAAATCCAGTCCGCTTTGCCCAGGTAGTCGGCGG
JMSF016L07+           ATTGGTCTCTCCGGAGAACTTGGGGCGAAATCCAGTCCGCTTTGCCCAGGTAGTCGGCGG
JMSF016G11+           ATTGGTCTCTCCGGAGAACTTGGGGCGAAATCCAGTCCGCTTTGCCCAGGTAGTCGGCGG
JMSF034M24+           ATTGGTCTCTCCGGAGAACTTGGGGCGAAATCCAGTCCGCTTTGCCCAGGTAGTCGGCGG
                      ____________________________________________________________
consensus             ATTGGTCTCTCCGGAGAACTTGGGGCGAAATCCAGTCCGCTTTGCCCAGGTAGTCGGCGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF034N03+           CATTGCGGGAGCTGCCGGTGCGGGCGGCCATGGACCGGGTCGGGTCTTCTTACTAGGGTC
JMFF023D03+           CATTGCGGGAGCTGCCGGTGCGGGCGGCCATGGACCGGGTCGGGTCTTCTTACTAGGGTC
JMSF016L07+           CATTGCGGGAGCTGCCGGTGCGGGCGGCCATGGACCGGGTCGGGTCTTCTTACTAGGGTC
JMSF016G11+           CATTGCGGGAGCTGCCGGTGCGGGCGGCCATGGACCGGGTCGGGTCTTCTTACTAGGGTC
JMSF034M24+           CATTGCGGGAGCTGCCGGTGCGGGCGGCCATGGACCGGGTCGGGTCTTCTTACTAGGGTC
                      ____________________________________________________________
consensus             CATTGCGGGAGCTGCCGGTGCGGGCGGCCATGGACCGGGTCGGGTCTTCTTACTAGGGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF034N03+           CGAGCTAGCCATTATCCTACCAACACATAGCTTCACCGACGCGAATTCTGCAACACTAAA
JMFF023D03+           CGAGCTAGCCATTATCCTACCAACACATAGCTTCACCGACGCGAATTCTGCAACACTAAA
JMSF016L07+           CGAGCTAGCCATTATCCTACCAACACATAGCTTCACCGACGCGAATTCTGCAACACTAAA
JMSF016G11+           CGAGCTAGCCATTATCCTACCAACACATAGCTTCACCGACGCGAATTCTGCAACACTAAA
JMSF034M24+           CGAGCTAGCCATTATCCTACCAACACATAGCTTCACCGACGCGAATTCTGCAACACTAAA
                      ____________________________________________________________
consensus             CGAGCTAGCCATTATCCTACCAACACATAGCTTCACCGACGCGAATTCTGCAACACTAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF034N03+           CCGAAACGCGAGGAGTTAGATCTGAGCCGCGATTGCGGTCTAGGGCAAACTCCGCGAGCC
JMFF023D03+           CCGAAACGCGAGGAGTTAGATCTGAGCCGCGATTGCGGTCTAGGGCAAACTCCGCGAGCC
JMSF016L07+           CCGAAACGCGAGGAGTTAGATCTGAGCCGCGATTGCGGTCTAGGGCAAACTCCGCGAGCC
JMSF016G11+           CCGAAACGCGAGGAGTTAGATCTGAGCCGCGATTGCGGTCTAGGGCAAACTCCGCGAGCC
JMSF034M24+           CCGAAACGCGAGGAGTTAGATCTGAGCCGCGATTGCGGTCTAGGGCAAACTCCGCGAGCC
                      ____________________________________________________________
consensus             CCGAAACGCGAGGAGTTAGATCTGAGCCGCGATTGCGGTCTAGGGCAAACTCCGCGAGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF034N03+           GCAATGACCGAGAGCGAAGCAGGAAGCAAAGTCCGCCGTTTAGAGAGAGAAAATGCGAGA
JMFF023D03+           GCAATGACCGAGAGCGAAGCAGGAAGCAAAGTCCGCCGTTTAGAGAGAGAAAATGCGAGA
JMSF016L07+           GCAATGACCGAGAGCGAAGCAGGAAGCAAAGTCCGCCGTTTAGAGAGAGAAAATGCGAGA
JMSF016G11+           GCAATGACCGAGAGCGAAGCAGGAAGCAAAGTCCGCCGTTTAGAGAGAGAAAATGCGAGA
JMSF034M24+           GCAATGACCGAGAGCGAAGCAGGAAGCAAAGTCCGCCGTTTAGAGAGAGAAAATGCGAGA
                      ____________________________________________________________
consensus             GCAATGACCGAGAGCGAAGCAGGAAGCAAAGTCCGCCGTTTAGAGAGAGAAAATGCGAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF034N03+           GAGCAGAGTAGCGTAGAGAGAGAGAGAAGGT                             
JMFF023D03+           GAGCAGAGTAGCGTAGAGAGAGAGAGAAGGTTGCAGAGAGGGTGAGAGT           
JMSF016L07+           GAGCAGAGTAGCGTAGAGAGAGAGAGAAGGTT                            
JMSF016G11+           GAG-AGAGTAGCGTAGAGAGAGAGAGAAGGTTGCAGAGAGGGTGAGAGT           
JMSF034M24+           GAGCAGAGTAGCGTAGAGAGAGAGAGAAGGTTGCAGAGAGGGTGAGAGTGAAATGGGAGC
                      ____________________________________________________________
consensus             GAGCAGAGTAGCGTAGAGAGAGAGAGAAGGTTGCAGAGAGGGTGAGAGTGAAATGGGAGC