Contig 013449:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF022P10Sequence443013449 (4)ref|XP_007161286.1|7e-43hypothetical protein PHAVU_001G057400g [Phaseolus vulgaris] gb|ESW33280.1| hypot391013449 (4)ref|XP_007161286.1|4e-43hypothetical protein PHAVU_001G057400g [Phaseolus vulgaris] gb|ESW33280.1| hypot
JMSF034L19Sequence500013449 (4)ref|XP_007161286.1|1e-42hypothetical protein PHAVU_001G057400g [Phaseolus vulgaris] gb|ESW33280.1| hypot446013449 (4)ref|XP_007161286.1|5e-43hypothetical protein PHAVU_001G057400g [Phaseolus vulgaris] gb|ESW33280.1| hypot

Alignment

This contig is upended


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rJMSF022P10+                                 GCGTTGTTGCTTGTTTCAGAGTTCAGATATGGCAGCG
JMSF022P10-                                  GCGTTGTTGCTTGTTTCAGAGTTCAGATATGGCAGCG
rJMSF034L19+                                                  AGAGTTCAGATATGGCAGCG
JMSF034L19-                                                   AGAGTTCAGATATGGCAGCG
                      ____________________________________________________________
consensus                                    GCGTTGTTGCTTGTTTCAGAGTTCAGATATGGCAGCG
 
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rJMSF022P10+          ACAACAGATGCCCAGTCGAAATGGGAATTCAGCTGTGAGTTGGAAGTAAATCTTGGATCT
JMSF022P10-           ACAACAGATGCCCAGTCGAAATGGGAATTCAGCTGTGAGTTGGAAGTAAATCTTGGATCT
rJMSF034L19+          ACAACAGATGCCCAGTCGAAATGGGAATTCAGCTGTGAGTTGGAAGTAAATCTTGGATCT
JMSF034L19-           ACAACAGATGCCCAGTCGAAATGGGAATTCAGCTGTGAGTTGGAAGTAAATCTTGGATCT
                      ____________________________________________________________
consensus             ACAACAGATGCCCAGTCGAAATGGGAATTCAGCTGTGAGTTGGAAGTAAATCTTGGATCT
 
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rJMSF022P10+          CAAGAACATGCTCAAATTATCTATACAGCTTTGTCTGTTGATAAGGAGTTGCAGCCTGAT
JMSF022P10-           CAAGAACATGCTCAAATTATCTATACAGCTTTGTCTGTTGATAAGGAGTTGCAGCCTGAT
rJMSF034L19+          CAAGAACATGCTCAAATTATCTATACAGCTTTGTCTGTTGATAAGGAGTTGCAGCCTGAT
JMSF034L19-           CAAGAACATGCTCAAATTATCTATACAGCTTTGTCTGTTGATAAGGAGTTGCAGCCTGAT
                      ____________________________________________________________
consensus             CAAGAACATGCTCAAATTATCTATACAGCTTTGTCTGTTGATAAGGAGTTGCAGCCTGAT
 
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rJMSF022P10+          AAGGTGAAAAGGGTAATGTCGGCTTCAGATGGGAAGCTTTTAGTGCATTTTGAGGCCACG
JMSF022P10-           AAGGTGAAAAGGGTAATGTCGGCTTCAGATGGGAAGCTTTTAGTGCATTTTGAGGCCACG
rJMSF034L19+          AAGGTGAAAAGGGTAATGTCGGCTTCAGATGGGAAGCTTTTAGTGCATTTTGAGGCCACG
JMSF034L19-           AAGGTGAAAAGGGTAATGTCGGCTTCAGATGGGAAGCTTTTAGTGCATTTTGAGGCCACG
                      ____________________________________________________________
consensus             AAGGTGAAAAGGGTAATGTCGGCTTCAGATGGGAAGCTTTTAGTGCATTTTGAGGCCACG
 
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rJMSF022P10+          GAAGCTAGGTTTCTTCGTGCATCATTTAGTGCTTTTGTAGATGTTCTTACACTTGCCACT
JMSF022P10-           GAAGCTAGGTTTCTTCGTGCATCATTTAGTGCTTTTGTAGATGTTCTTACACTTGCCACT
rJMSF034L19+          GAAGCTAGGTTTCTTCGTGCATCATTTAGTGCTTTTGTAGATGTTCTTACACTTGCCACT
JMSF034L19-           GAAGCTAGGTTTCTTCGTGCATCATTTAGTGCTTTTGTAGATGTTCTTACACTTGCCACT
                      ____________________________________________________________
consensus             GAAGCTAGGTTTCTTCGTGCATCATTTAGTGCTTTTGTAGATGTTCTTACACTTGCCACT
 
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rJMSF022P10+          AAAACCATTGAAGAATTTGGTCCAGTTATAGAAGTATGATAGATACACTCGACATTGTTG
JMSF022P10-           AAAACCATTGAAGAATTTGGTCCAGTTATAGAAGTATGATAGATACACTCGACATTGTTG
rJMSF034L19+          AAAACCATTGAAGAATTTGGTCCAGTTATAGAAGTATGATAGATACACTCGACATTGTTG
JMSF034L19-           AAAACCATTGAAGAATTTGGTCCAGTTATAGAAGTATGATAGATACACTCGACATTGTTG
                      ____________________________________________________________
consensus             AAAACCATTGAAGAATTTGGTCCAGTTATAGAAGTATGATAGATACACTCGACATTGTTG
 
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rJMSF022P10+          GACACGAGTTGGCTACTTTATGGTTTTTTATTGTCGATGGCTTCTTGTATTGTA      
JMSF022P10-           GACACGAGTTGGCTACTTTATGGTTTTTTATTGTCGATGGCTTCTTGTATTGTACTATTG
rJMSF034L19+          GACACGAGTTGGCTACTTTATGGTTTTTTATTGTCGATGGCTTCTTGTATTGTACTATTG
JMSF034L19-           GACACGAGTTGGCTACTTTATGGTTTTTTATTGTCGATGGCTTCTTGTATTGTACTATTG
                      ____________________________________________________________
consensus             GACACGAGTTGGCTACTTTATGGTTTTTTATTGTCGATGGCTTCTTGTATTGTACTATTG
 
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JMSF022P10-           TTTAATGAAACCCCGTAGTTTAGTGTTTGGTGGATT                        
rJMSF034L19+          TTTAATGAAACCCCGTAGTTTAGTGTTTGGTGGATTTACCATGGCTCCAAGGAAATCTCG
JMSF034L19-           TTTAATGAAACCCCGTAGTTTAGTGTTTGGTGGATTTA-CATGGCTCCAAGGAAATCTCG
                      ____________________________________________________________
consensus             TTTAATGAAACCCCGTAGTTTAGTGTTTGGTGGATTTACCATGGCTCCAAGGAAATCTCG
 
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rJMSF034L19+          CATTC                                                       
JMSF034L19-           CATTCTTGTGGGGTTTTTCTTGTATGAAAGGTTTGATTTAGTTTTCTTGTAAAAAAAAAA
                      ____________________________________________________________
consensus             CATTCTTGTGGGGTTTTTCTTGTATGAAAGGTTTGATTTAGTTTTCTTGTAAAAAAAAAA