Contig 013445:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS162A08Sequence582013445 (3)emb|CDO97890.1|4e-54unnamed protein product [Coffea canephora]
JMSF008P18Sequence154013445 (3)297002773 (3)
JMSF033K04Sequence642013445 (3)emb|CDO97890.1|7e-59unnamed protein product [Coffea canephora]540002773 (3)gb|EYU21358.1|2e-39hypothetical protein MIMGU_mgv1a000350mg [Erythranthe guttata]

Alignment

This contig is upended


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JMFS162A08+                                                     AAGATTAACGGAGCTATC
JMSF033K04+                             TTGGCCATACTCAACCCAACAACAAAGATTAACGGAGCTATC
                      ____________________________________________________________
consensus                               TTGGCCATACTCAACCCAACAACAAAGATTAACGGAGCTATC
 
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JMFS162A08+           ATACTAAGAGCTGAGAATGGTGAAACTGGTGTGAGTGAAAGGATTGCCGCCAGAAGAAAG
JMSF033K04+           ATACTAAGAGCTGAGAATGGTGAAACTGGTGTGAGTGAAAGGATTGCCGCCAGAAGAAAG
                      ____________________________________________________________
consensus             ATACTAAGAGCTGAGAATGGTGAAACTGGTGTGAGTGAAAGGATTGCCGCCAGAAGAAAG
 
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JMFS162A08+           TACAAGTTGGCAACACGCCTGAATTGCTCAAAGATAGCCTTGGGTAGGAACGTTAAGACA
JMSF033K04+           TACAAGTTGGCAACACGCCTGAATTGCTCAAAGATAGCCTTGGGTAGGAACGTTAAGACA
                      ____________________________________________________________
consensus             TACAAGTTGGCAACACGCCTGAATTGCTCAAAGATAGCCTTGGGTAGGAACGTTAAGACA
 
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JMFS162A08+           TTGTACTTCGTGGTTGATATATAATTTGAGCAGTACTTGAGAGGCTTCACTTCATGAAGT
JMSF033K04+           TTGTACTTCGTGGTTGATATATAATTTGAGCAGTACTTGAGAGGCTTCACTTCATGAAGT
                      ____________________________________________________________
consensus             TTGTACTTCGTGGTTGATATATAATTTGAGCAGTACTTGAGAGGCTTCACTTCATGAAGT
 
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JMFS162A08+           TTGGGTTGGTTGCAACGGACTACCCGTGAATAACCCGGGCCTAATGGGTGAGGCCCCTCT
JMSF033K04+           TTGGGTTGGTTGCAACGGACTACCCGTGAATAACCCGGGCCTAATGGGTGAGGCCCCTCT
                      ____________________________________________________________
consensus             TTGGGTTGGTTGCAACGGACTACCCGTGAATAACCCGGGCCTAATGGGTGAGGCCCCTCT
 
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JMFS162A08+           TCTTCAGAAGCTTGTGGCCGGACACATGCAAATGTGTACAAATTGCTCCTGCTAATCTTT
JMSF033K04+           TCTTCAGAAGCTTGTGGCCGGACACATGCAAATGTGTACAAATTGCTCCTGNTAATCTTT
                      ____________________________________________________________
consensus             TCTTCAGAAGCTTGTGGCCGGACACATGCAAATGTGTACAAATTGCTCCTGCTAATCTTT
 
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JMFS162A08+           GCCCTTATTCTTCCTCCAGCCATTTTCGCTTACTCCCTTGGATGATGAGCTCAGTTCAAT
JMSF033K04+           GCCCTTATTCTTCCTCCAGCCATTTTCGCTTACTCCCTTGGATGATGAGCTCAGTTCAAT
                      ____________________________________________________________
consensus             GCCCTTATTCTTCCTCCAGCCATTTTCGCTTACTCCCTTGGATGATGAGCTCAGTTCAAT
 
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JMFS162A08+           GGTAGCACCACATGACTCAATCAAGGGAGGAGGGTATACTAGCCTGCTCACTGGCAACTT
JMSF033K04+           GGTAGCACCACATGACTCAATCAAGGGAGGAGGGTATACTAGCCTGCTCACTGGCAACTT
                      ____________________________________________________________
consensus             GGTAGCACCACATGACTCAATCAAGGGAGGAGGGTATACTAGCCTGCTCACTGGCAACTT
 
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JMFS162A08+           AACTCAAAAGGGGTAGGTGAATTCTAGGAACAGACCCAGATAGGAAAACAATGCGAGGGA
JMSF008P18+             CTCAAAAGGGGTAGGTGAATTCTAGGAACAGACCCNGATAGGAAAACAATGCGAGGGA
JMSF033K04+           AACTCAAAAGGGGTAGGTGAATTCTAGGAACAGACCCAGATAGGAAAACAATGCGAGGGA
                      ____________________________________________________________
consensus             AACTCAAAAGGGGTAGGTGAATTCTAGGAACAGACCCAGATAGGAAAACAATGCGAGGGA
 
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JMFS162A08+           GGGGATAGAGCTGCAGAGTTGCAGAGATCGCAAGTGTAGAAAGAGAAAGTAAAAGAAGCT
JMSF008P18+           GGGGATAGAGCNGCAGAGTTGCAGAGATCGCAAGTGTAGAAAGAGAAAGTAAAAGAAGCT
JMSF033K04+           GGGGATAGAGCTGCAGAGTTGCAGAGATCNCAAGTGTAGAAAGAGAAAGTAAAAGAAGCT
                      ____________________________________________________________
consensus             GGGGATAGAGCTGCAGAGTTGCAGAGATCGCAAGTGTAGAAAGAGAAAGTAAAAGAAGCT
 
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JMFS162A08+           TTAGAAGTTTAGAGAGAGAGAGAG                                    
JMSF008P18+           TTAGAAGTTTAGAGAGAGAGAGAGAGAGAAGCTG                          
JMSF033K04+           TTAGAAGTTTAGAGAGAGAGAGAGAGAGAAGCTGTGGCTAAGCAATTGAAAACTGGGCCC
                      ____________________________________________________________
consensus             TTAGAAGTTTAGAGAGAGAGAGAGAGAGAAGCTGTGGCTAAGCAATTGAAAACTGGGCCC