Contig 013442:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF015P01Sequence401013442 (2)ref|XP_009801999.1|6e-63PREDICTED: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferas770022499ref|XP_009774812.1|7e-48PREDICTED: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferas
JMSF033D19Sequence708013442 (2)ref|XP_009801999.1|9e-120PREDICTED: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferas144008312 (15)gb|KHG11096.1|1e-22putative 26S proteasome non-ATPase regulatory subunit 3 [Gossypium arboreum]

Alignment

This contig is upended


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JMSF033D19+                       AAAATAGTTGATCCAATGCCCATTTGTAATGACGTGCAATCTTGTAAT
                      ____________________________________________________________
consensus                         AAAATAGTTGATCCAATGCCCATTTGTAATGACGTGCAATCTTGTAAT
 
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JMSF033D19+           ATGCAATAATTTCCCCTGGTCTCTCTGTATGCACAGGTTCATAATCCAAATGCTGCATAT
                      ____________________________________________________________
consensus             ATGCAATAATTTCCCCTGGTCTCTCTGTATGCACAGGTTCATAATCCAAATGCTGCATAT
 
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JMSF033D19+           ACGTCAATTGATCATAGCTCAAAGCCAAGGTTTTAACATCAGGATGTGAACCATCCTGGG
                      ____________________________________________________________
consensus             ACGTCAATTGATCATAGCTCAAAGCCAAGGTTTTAACATCAGGATGTGAACCATCCTGGG
 
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JMSF033D19+           ATATGAAAAGAGGAAATTTTGATGCAACAGAAGTCTGATGTTTTAGAATAGACTGAATTG
                      ____________________________________________________________
consensus             ATATGAAAAGAGGAAATTTTGATGCAACAGAAGTCTGATGTTTTAGAATAGACTGAATTG
 
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JMSF015P01+                TTAAGGTAATCAGCACGATTACAAGCCATAACAACAACAGCTGCCACTGGAACCT
JMSF033D19+           TCCTTTTAAGGTAATCAGCACGATTACAAGCCATAACAACAACAGCTGCCACTGGAACCT
                      ____________________________________________________________
consensus             TCCTTTTAAGGTAATCAGCACGATTACAAGCCATAACAACAACAGCTGCCACTGGAACCT
 
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JMSF015P01+           GGGTACTGCTGATCAACTTCTGCAGGCCCTTACTCTCAAGATCTTGAACAAGTGCTCTTA
JMSF033D19+           GGGTACTGCTGATCAACTTCTGCAGGCCCTTACTCTCAAGATCTTGAACAAGTGCTCTTA
                      ____________________________________________________________
consensus             GGGTACTGCTGATCAACTTCTGCAGGCCCTTACTCTCAAGATCTTGAACAAGTGCTCTTA
 
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JMSF015P01+           GGTGTTGGCACTCTTGATATCGACGCTTCATTTCCTCTTCAAGGGCCGTAATTCGTCCTT
JMSF033D19+           GGTGTTGGCACTCTTGATATCGACGCTTCATTTCCTCTTCAAGGGCCGTAATTCGTCCTT
                      ____________________________________________________________
consensus             GGTGTTGGCACTCTTGATATCGACGCTTCATTTCCTCTTCAAGGGCCGTAATTCGTCCTT
 
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JMSF015P01+           GCTGCAGACTAATCTGGTCAATGAAAGAGCGTGTCTGACTTGTACAATGGTTTTCTGCTT
JMSF033D19+           GCTGCAGACTAATCTGGTCAATGAAAGAGCGTGTCTGACTTGTACAATGGTTTTCTGCTT
                      ____________________________________________________________
consensus             GCTGCAGACTAATCTGGTCAATGAAAGAGCGTGTCTGACTTGTACAATGGTTTTCTGCTT
 
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JMSF015P01+           CTATTGCAGCTGCAAGGCGATCAGCATATTCAGATTGTGTAGCAAAAAGCCGCATCTGGA
JMSF033D19+           CTATTGCAGCTGCAAGGCGATCAGCATATTCAGATTGTGTAGCAAAAAGCCGCATCTGGA
                      ____________________________________________________________
consensus             CTATTGCAGCTGCAAGGCGATCAGCATATTCAGATTGTGTAGCAAAAAGCCGCATCTGGA
 
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JMSF015P01+           TGTAGATGAAGGCCAAGGCAGCAACAAGGAGAAGGTACCGGAAATCACATGACCACTTGA
JMSF033D19+           TGTAGATGAAGGCCAAGGCAGCAACAAGGAGAAGGTACCGGAAATCACATGACCACTTGA
                      ____________________________________________________________
consensus             TGTAGATGAAGGCCAAGGCAGCAACAAGGAGAAGGTACCGGAAATCACATGACCACTTGA
 
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JMSF015P01+           AGCTGTTGGTTCTCATTGTAACAGATCGATGTGTTGCTTTTTCC                
JMSF033D19+           AGCTGTTGGTTCTCATTGTAACAGATCGATGTGTTGCTTTTTCCGATCCGACTGTTGTTG
                      ____________________________________________________________
consensus             AGCTGTTGGTTCTCATTGTAACAGATCGATGTGTTGCTTTTTCCGATCCGACTGTTGTTG
 
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JMSF033D19+           GTGTTTTCCCCTTTAGTTTACCTGGACACAGGACAGGCTCCGACTCCAAGTCCCCCGCCC
                      ____________________________________________________________
consensus             GTGTTTTCCCCTTTAGTTTACCTGGACACAGGACAGGCTCCGACTCCAAGTCCCCCGCCC