Contig 013440:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF047F05-                                CGACAACGAAGTAATAAATTGTGAATATAGCACACAAC
                      ____________________________________________________________
consensus                                   CGACAACGAAGTAATAAATTGTGAATATAGCACACAAC
 
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rJMFF049A21-           TGCCCAAGAGCTTCAGTTTGAAGCATTTAAAATTGTAGACTAATAATCCTCTTCTCAAC
rJMFF047F05-          ATGCCCAAGAGCTTCAGTTTGAAGCATTTAAAATTGTAGACTAATAATCCTCTTCTCAAC
                      ____________________________________________________________
consensus             ATGCCCAAGAGCTTCAGTTTGAAGCATTTAAAATTGTAGACTAATAATCCTCTTCTCAAC
 
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rJMFF049A21-          ACTAGTCCTGTTGGCCCTATACTATATAATGAGAGAACAAGAATTGAAACACAGTTTACA
rJMFF047F05-          ACTAGTCCTGTTGGCCCTATACTATATAATGAGAGAACAAGAATTGAAACACAGTTTACA
                      ____________________________________________________________
consensus             ACTAGTCCTGTTGGCCCTATACTATATAATGAGAGAACAAGAATTGAAACACAGTTTACA
 
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rJMFF049A21-          TGATTGAAATTGAAATTGAAATTGAAATAAAATCATACCATTTCCAGAGACCTATAATGA
rJMFF047F05-          TGATTGAAATTGAAATTGAAATTGAAATAAAATCATACCATTTCCAGAGACCTATAATGA
                      ____________________________________________________________
consensus             TGATTGAAATTGAAATTGAAATTGAAATAAAATCATACCATTTCCAGAGACCTATAATGA
 
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rJMFF049A21-          AAAGGAAGGTATAAGAAGCACAAGTAAAGGGGCAAAGAGATGCTACTACTTAAGAAGATC
rJMFF047F05-          AAAGGAAGGTATAAGAAGCACAAGTAAAGGGGCAAAGAGATGCTACTACTTAAGAAGATC
                      ____________________________________________________________
consensus             AAAGGAAGGTATAAGAAGCACAAGTAAAGGGGCAAAGAGATGCTACTACTTAAGAAGATC
 
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rJMFF049A21-          ATCGGAAACAACCTTGAGGAGCTTCTTATGCTTGGCAGATTTGGCAATTTTCTTAAGAGT
rJMFF047F05-          ATCGGAAACAACCTTGAGGAGCTTCTTATGCTTGGCAGATTTGGCAATTTTCTTAAGAGT
JMFF047F05+                                       TGCTTGGCAGATTTGGCAATTTTCTTAAGAGT
                      ____________________________________________________________
consensus             ATCGGAAACAACCTTGAGGAGCTTCTTATGCTTGGCAGATTTGGCAATTTTCTTAAGAGT
 
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rJMFF049A21-          CTTAGGGTTGGTGATCTTTTGAAACTTGGTACCAGACTTGAGAATGTTGTCCTTCTTCCT
rJMFF047F05-          CTTAGGGTTGGTGATCTTTTGAAACTTGGTACCAGACTTGAGAATGTTGTCCTTCTTCCT
JMFF047F05+           CTTAGGGNTGGTGATCTTTTGAAACTTGGTACCAGACTGNAGAATGTTGTCCTTCTTCCT
                      ____________________________________________________________
consensus             CTTAGGGTTGGTGATCTTTTGAAACTTGGTACCAGACTTGAGAATGTTGTCCTTCTTCCT
 
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rJMFF049A21-          CTTCTCCCTCTCCTCCCTCTTCTGCCGCTTCTCTATCTTGTTCTGCCTTATCTCCTCCTT
rJMFF047F05-          CTTCTCCCTCTCCTCCCTCTTCTGCCGCTTCTCTATCTTGTTCTGCCTTATCTCCTCCTT
JMFF047F05+           CTTCTCCCTCTCCTCCCTCTTCTGCCGCTTCTCTATCTTGTTCTGCCTTATCTCCTCCTT
                      ____________________________________________________________
consensus             CTTCTCCCTCTCCTCCCTCTTCTGCCGCTTCTCTATCTTGTTCTGCCTTATCTCCTCCTT
 
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rJMFF049A21-          CAGNTCATTCATTCTCTC                                          
rJMFF047F05-          CAGTTCATTCATTCTCTCTTTGTACGCCTTCTTTATCTCTTTCTCCTTCACCCTCTGCTC
JMFF047F05+           CAGTTCATTCATTCTCTCTTTGTACGCCTTCTTTATCTCTTTCTCCTTCACCCTCTGCTC
                      ____________________________________________________________
consensus             CAGTTCATTCATTCTCTCTTTGTACGCCTTCTTTATCTCTTTCTCCTTCACCCTCTGCTC
 
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rJMFF047F05-          CAGCGTCTTCCCCTTCCGGCTCACCTGCACCGCCGACGACCTGTGCGTCCGTGCCTGCTT
JMFF047F05+           CAGCGTCTTCCCCTTCCGGCTCACCTGCACCGCCGACGACCTGTGCGTCCGTGCCTGCTT
                      ____________________________________________________________
consensus             CAGCGTCTTCCCCTTCCGGCTCACCTGCACCGCCGACGACCTGTGCGTCCGTGCCTGCTT
 
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rJMFF047F05-          CCACTTCCT                                                   
JMFF047F05+           CCACTTCCTACCTGACACCTTCCCCGCTATAACACCGTCGTACGTCGGCCTGTTCGGATC
JMFF049A21+                                                             TGTTCGGATC
                      ____________________________________________________________
consensus             CCACTTCCTACCTGACACCTTCCCCGCTATAACACCGTCGTACGTCGGCCTGTTCGGATC
 
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JMFF047F05+           CTCAGAAGAAGGGACCGCCTGCCTTTTCGACGGAGGGGGGCCGCTTTCCTCTTCCACCTC
JMFF049A21+           CTCAGAAGAAGGGACCGCCTGCCTTTTCGACGGAGGGGGGCCGCTTTCCTCTTCCACCTC
                      ____________________________________________________________
consensus             CTCAGAAGAAGGGACCGCCTGCCTTTTCGACGGAGGGGGGCCGCTTTCCTCTTCCACCTC
 
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JMFF047F05+           CATGGTGCCCGCGTCTTCCTCCGATACATCGCCGGGGGCTTCCTTCTCTGCCCTCTTTCG
JMFF049A21+           CATGGTGCCCGCGTCTTCCTCCGATACATCGCCGGGGGCTTCCTTCTCTGCCCTCTTTCG
JMSF033B01+                                                               CTCTTTCG
                      ____________________________________________________________
consensus             CATGGTGCCCGCGTCTTCCTCCGATACATCGCCGGGGGCTTCCTTCTCTGCCCTCTTTCG
 
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JMFF047F05+           CTTGTAAGTTTTGCCTCCGAAGCCCTCATCCAGGCACCCAAAATCAATGGTACACGCCAT
JMFF049A21+           CTTGTAAGTTTTGCCTCCGAAGCCCTCATCCAGGCACCTAAAATCAATGGTACACGCCAT
JMSF033B01+           CTTGTAAGTTTTGCCTCCGAAACCCTCATCCAGGCACCTAAAATCAATGGTACATGCCAT
                      ____________________________________________________________
consensus             CTTGTAAGTTTTGCCTCCGAAGCCCTCATCCAGGCACCTAAAATCAATGGTACACGCCAT
 
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JMFF047F05+           ATTCTCTTC                                                   
JMFF049A21+           ATTCTCTTC                                                   
JMFS015D10+                                                  GAACAAGGAGATCAACCCTAG
JMSF033B01+           ATTCTCTTCGCTCACAGCAGCACCTCTAAATCTCTAATCGAACAAGGAGATCAACCCTAG
                      ____________________________________________________________
consensus             ATTCTCTTCGCTCACAGCAGCACCTCTAAATCTCTAATCGAACAAGGAGATCAACCCTAG
 
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JMFS015D10+           TACTAGACTACTAGTTATATTCGGAAAAAATTTAAAAGATTAATAATCGAAAAAAAGAAT
JMSF033B01+           TACTAGACTACTAGTTATATTCGGAAAAAATTTAAAAGATTAATAATCGAAAAAAAGAAT
                      ____________________________________________________________
consensus             TACTAGACTACTAGTTATATTCGGAAAAAATTTAAAAGATTAATAATCGAAAAAAAGAAT
 
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JMFS015D10+           AGAACATACATACAGATTTATATTGAAAGTAAAACTATTTACTGTTTTGAAGTTTAAACT
JMSF033B01+           AGAACATACATACAGATTTATATTGAAAGTAAAACTATTTACTGTTTTGAAGTTTAAACT
                      ____________________________________________________________
consensus             AGAACATACATACAGATTTATATTGAAAGTAAAACTATTTACTGTTTTGAAGTTTAAACT
 
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JMFS015D10+           AACAGTCCATATACCAAGATAACCATGATTTATATCTGAAATTTTTAAATGAAACTATGA
JMSF033B01+           AACAGTCCATATACCAAGATAACCATGATTTATATCTGAAATTTTTAAATGAAACTATGA
                      ____________________________________________________________
consensus             AACAGTCCATATACCAAGATAACCATGATTTATATCTGAAATTTTTAAATGAAACTATGA
 
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JMFS015D10+           AAGTATGAAATAACAAAAAACATAGTCTACTTTAATCTATTCCAATTTCAAGATATCATA
JMSF033B01+           AAGTATGAAATAACAAAAAACATAGTCTACTTTAATCTATTCCAATTTCAAGATATCATA
                      ____________________________________________________________
consensus             AAGTATGAAATAACAAAAAACATAGTCTACTTTAATCTATTCCAATTTCAAGATATCATA
 
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JMFS015D10+           TTTCAAATTAAAAGTAACTTTTCCAGAATTTATCTATAAAAAATTTAAATGAAAATATGA
JMSF033B01+           TTTCAAATTAAAAGTAACTTTTCCAGAATTTATCTATAAAAAATTTAAATGAAAATATGA
                      ____________________________________________________________
consensus             TTTCAAATTAAAAGTAACTTTTCCAGAATTTATCTATAAAAAATTTAAATGAAAATATGA
 
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JMFS015D10+           AACCTGGAGGGCTGGAGGGTAGAGCGTGCGACGGCGACGGCAGGGTGGAGCAGAGGAGAC
JMSF033B01+           AACCTGGAGGGCTGGAGGGTAGAGCGTGCGACGGCGACGGCAGGGTGGAGCAGAGGAGAC
                      ____________________________________________________________
consensus             AACCTGGAGGGCTGGAGGGTAGAGCGTGCGACGGCGACGGCAGGGTGGAGCAGAGGAGAC
 
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JMFS015D10+           GGAGGCAACGACCTGGAGCAGAGGAGAACAGTCGCGACTCGCGTGTAGGCTTGGTGCCGG
JMSF033B01+           GGAGGCAACGACCTGGAGCAGAGGAGAACAGTCGCGACTCGCGTGTAGGCTTGGTGCCGG
                      ____________________________________________________________
consensus             GGAGGCAACGACCTGGAGCAGAGGAGAACAGTCGCGACTCGCGTGTAGGCTTGGTGCCGG
 
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JMFS015D10+           TGGGCGGTGGTGGGTGAGAGACCTACAGTAGTTCTTCGGCTTCTTCTCAGACTGCAGAGA
JMSF033B01+           TGGGCGGTGGTGGGTGAGAGACCTACAGTAGTTCTTCGGCTTCTTCTCAGACTGCAGAGA
                      ____________________________________________________________
consensus             TGGGCGGTGGTGGGTGAGAGACCTACAGTAGTTCTTCGGCTTCTTCTCAGACTGCAGAGA
 
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JMFS015D10+           GAAAGAGACGGCCAGTACTTCTGCAGTAATCAATTTTAG                     
JMSF033B01+           GAAAGAGACGGCCAGTACTTCTGCAGTAATCAATTTTAGGGTTGCTGGGTTGGGGTCTTC
                      ____________________________________________________________
consensus             GAAAGAGACGGCCAGTACTTCTGCAGTAATCAATTTTAGGGTTGCTGGGTTGGGGTCTTC