Contig 013439:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF033A15-              ACATTCACTATGAAGTTCAGTGATTGCATTTGTAATATGATACAACAATATACTAG
rJMSF017H07-            TAACATTCACTATGAAGTTCAGTGATTGCATTTGTAATATGATACAACAATATACTAG
                      ____________________________________________________________
consensus               TAACATTCACTATGAAGTTCAGTGATTGCATTTGTAATATGATACAACAATATACTAG
 
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rJMSF033A15-          GACACATCAATTCTTTGTACACTCATAGAGGCTGGTTCCCTGATTTCTCCATTAGGTCTG
rJMSF017H07-          GACACATCAATTCTTTGTACACTCATAGAGGCTGGTTCCCTGATTTCTCCATTAGGTCTG
                      ____________________________________________________________
consensus             GACACATCAATTCTTTGTACACTCATAGAGGCTGGTTCCCTGATTTCTCCATTAGGTCTG
 
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rJMSF033A15-          CAAAACACTTCTTCCAATCCAAAACCTTCTCCTTGCCATTAACCACCTCAAATATAAGTC
rJMSF017H07-          CAAAACACTTCTTCCAATCCAAAACCTTCTCCTTGCCATTAACCACCTCAAATATAAGTC
                      ____________________________________________________________
consensus             CAAAACACTTCTTCCAATCCAAAACCTTCTCCTTGCCATTAACCACCTCAAATATAAGTC
 
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rJMSF033A15-          CTGTTTGTGGTACTGTGTTCAGAGCCTCTACACATATGAAGGCGGCATCTTCCTTGCTAA
rJMSF017H07-          CTGTTTGTGGTACTGTGTTCAGAGCCTCTACACATATGAAGGCGGCATCTTCCTTGCTAA
                      ____________________________________________________________
consensus             CTGTTTGTGGTACTGTGTTCAGAGCCTCTACACATATGAAGGCGGCATCTTCCTTGCTAA
 
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rJMSF033A15-          GACTCCCTCGTCCTGCGCTACCCTCTTCAAAGCTGAAACCTTGCTGCCCACCCGGAGTGT
rJMSF017H07-          GACTCCCTCGTCCTGCGCTACCCTCTTCAAAGCTGAAACCTTGCTGCCCACCCGGAGTGT
                      ____________________________________________________________
consensus             GACTCCCTCGTCCTGCGCTACCCTCTTCAAAGCTGAAACCTTGCTGCCCACCCGGAGTGT
 
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rJMSF033A15-          TTGTCAATGAGCCAGTTCTAATTATGGTGTAAGGGATTCCCGAGGCCAAAACCACCGTTT
rJMSF017H07-          TTGTCAATGAGCCAGTTCTAATTATGGTGTAAGGGATTCCCGAGGCCAAAACCACCGTTT
                      ____________________________________________________________
consensus             TTGTCAATGAGCCAGTTCTAATTATGGTGTAAGGGATTCCCGAGGCCAAAACCACCGTTT
 
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rJMSF033A15-          CATCTTGCTCTGCCAGTTTTCTTGCATTGCCACTCAGCATTGCTTGGATACCACTAGAAC
rJMSF017H07-          CATCTTGCTCTGCCAGTTTTCTTGCATTGCCACTCAGCATTGCTTGGATACCACTAGAAC
                      ____________________________________________________________
consensus             CATCTTGCTCTGCCAGTTTTCTTGCATTGCCACTCAGCATTGCTTGGATACCACTAGAAC
 
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rJMSF033A15-          CT--------------CTGGGATAATAGGATCACATGTTGCAAACCCTTCCAACTATCAA
rJMSF017H07-          CTCTATAAACAGATAGCTGGGATAATAGGATCACATGTTGCAAACCCTTCCAACTATCAA
JMSF033A15+                           CTGGGATAATAGGATCACATGTTGCAAACCCTTCCAACTATCAA
                      ____________________________________________________________
consensus             CTCTATAAACAGATAGCTGGGATAATAGGATCACATGTTGCAAACCCTTCCAACTATCAA
 
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rJMSF033A15-          CGTTAGATATAAAACCTTCATTTGGGCATATGATCGCACGAACACCTTTGAGTGCTTTCT
rJMSF017H07-          CGTTAGATATAAAACCTTCATTTGGGCATATGATCGCACGAACACCTTTGAGTGCTTTCT
JMSF033A15+           CGTTAGATATAAAACCTTCATTTGGGCATATGATCGCACGAACACCTTTGAGTGCTTTCT
                      ____________________________________________________________
consensus             CGTTAGATATAAAACCTTCATTTGGGCATATGATCGCACGAACACCTTTGAGTGCTTTCT
 
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rJMSF033A15-          TTAAAAATGACTTATTCTTGACATCTCCGGCTATTGGCTCAACATAAGTGCCAAAGGCCT
rJMSF017H07-          TTAAAAATGACTTATTCTTGACATCTCCGGCTATTGGCTCAACATAAGTGCCAAAGGCCT
JMSF033A15+           TTAAAAATGACTTATTCTTGACATCTCCGGCTATTGGCTCAACATAAGTGCCAAAGGCCT
                      ____________________________________________________________
consensus             TTAAAAATGACTTATTCTTGACATCTCCGGCTATTGGCTCAACATAAGTGCCAAAGGCCT
 
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rJMSF033A15-          CCAAAGCAGCCTTCTTATCCTTCACTAGCACTTTTACGCTAGTTCTTTTGACTATCAATG
rJMSF017H07-          CCAAAGCAGCCTTCTTATCCTTCACTAGCACTTTTACGCTAGTTCTTTTGACTATCAATG
JMSF033A15+           CCAAAGCAGCCTTCTTATCCTTCACTAGCACTTTTACGCTAGTTCTTTTGACTATCAATG
                      ____________________________________________________________
consensus             CCAAAGCAGCCTTCTTATCCTTCACTAGCACTTTTACGCTAGTTCTTTTGACTATCAATG
 
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rJMSF033A15-          ACAATATAATCATCTGAACCAATCTCATTATCCCCGTCAGTTACTAAAACTGCATCCCGA
rJMSF017H07-          ACAATATAATCATCTG-ACCAATCTCATTATCCCCGTCAGTTACTAAAACTGCATCCCGA
JMSF033A15+           ACAATATAATCATCTG-ACCAATCTCATTATCCCCGTCAGTTACTAAAACTGCATCCCGA
                      ____________________________________________________________
consensus             ACAATATAATCATCTG-ACCAATCTCATTATCCCCGTCAGTTACTAAAACTGCATCCCGA
 
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rJMSF033A15-          ACTTGATCTCCATCTGANGCCTCATCTTCCACC                           
rJMSF017H07-          ACTTGATCTCCATCTGAAGCCTCATCTTCCACCCGCAANGATTCATCTTTGGTGA     
JMSF033A15+           ACTTGATCTCCATCTGAAGCCTCATCTTCCACCCGCAAAGATTCATCTTTGGTGAAGGGG
                      ____________________________________________________________
consensus             ACTTGATCTCCATCTGAAGCCTCATCTTCCACCCGCAAAGATTCATCTTTGGTGAAGGGG
 
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JMSF017H07+                                                       GTAGTCAAGAATTTGG
JMSF033A15+           TCAGGTGCCCCATACCATTTCCTTAACTTTGGACCCCCTTCAATGTAGTCAAGAATTTGG
                      ____________________________________________________________
consensus             TCAGGTGCCCCATACCATTTCCTTAACTTTGGACCCCCTTCAATGTAGTCAAGAATTTGG
 
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JMSF017H07+           TCCATGAAACCCAGTTTCTTCTTGGAAGCAAAGCAAGTCAGAGAAGAAAGCTTCCGAGCT
JMSF033A15+           CCCATGAAACCCAGTTTCTTCTTGGAAGCAAAGCAAGTCAGAGAAGAAAGCTTCCGAGCT
                      ____________________________________________________________
consensus             TCCATGAAACCCAGTTTCTTCTTGGAAGCAAAGCAAGTCAGAGAAGAAAGCTTCCGAGCT
 
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JMSF017H07+           TCCCCACCTGAGAGCACGAAAGTGGGATTCTTGTTACAGTTCCTGTACATGGAGCAATGC
JMSF033A15+           TCCCCACCTGAGAGCACGAAAGTGGGATTCTTGTTACAGTTCCTGTACATGGAGCAATGC
                      ____________________________________________________________
consensus             TCCCCACCTGAGAGCACGAAAGTGGGATTCTTGTTACAGTTCCTGTACATGGAGCAATGC
 
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JMSF017H07+           AGATGAGAAAATAGGGAGAGAGATGATGATGCTGAGCCCGCCATAGCTTTAAGCTATTAT
JMSF033A15+           AGATGAGAAAATAGGGAGAGAGATGATGATGCTGAGCCCGCCATAGCTTTAAGCTATTAT
                      ____________________________________________________________
consensus             AGATGAGAAAATAGGGAGAGAGATGATGATGCTGAGCCCGCCATAGCTTTAAGCTATTAT
 
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JMSF017H07+           CCTTTCGCTCAGTCATTAAAATTTCGGAGCGGTATTTGGTCAGCAATCACC         
JMSF033A15+           CCTTTCGCTCAGTCATTAAAATTTCGGAGCGGTATTTGGTCAGCAATCACCGACCCCAAC
                      ____________________________________________________________
consensus             CCTTTCGCTCAGTCATTAAAATTTCGGAGCGGTATTTGGTCAGCAATCACCGACCCCAAC