| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF002O22 | Sequence | 131 | 013438 (6) | emb|CDP07514.1| | 1e-04 | unnamed protein product [Coffea canephora] | 562 | 013438 (6) | ref|XP_004238260.1| | 254 | PREDICTED: uncharacterized protein LOC101260133 [Solanum lycopersicum] |
| JMSF030B07 | Sequence | 630 | 013438 (6) | ref|XP_011083684.1| | 3e-68 | PREDICTED: uncharacterized protein LOC105166140 isoform X2 [Sesamum indicum] | 709 | 013438 (6) | ref|XP_004238260.1| | 258 | PREDICTED: uncharacterized protein LOC101260133 [Solanum lycopersicum] |
| JMSF032O24 | Sequence | 647 | 013438 (6) | ref|XP_011083684.1| | 1e-67 | PREDICTED: uncharacterized protein LOC105166140 isoform X2 [Sesamum indicum] | 643 | 013438 (6) | ref|XP_006341942.1| | 199 | PREDICTED: uncharacterized protein LOC102591734 [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
rJMSF032O24- TCATGAAAGAAA
____________________________________________________________
consensus TCATGAAAGAAA
. : . : . : . : . : . :
rJMSF032O24- ATATTCCAATTCAGAGAAAGTGAAAATAATAATAGAGTTTATAATAATAAGAGAAATCAA
rJMSF030B07- ATAATAGAGTTTATAATAATAAGAGAAATCAA
____________________________________________________________
consensus ATATTCCAATTCAGAGAAAGTGAAAATAATAATAGAGTTTATAATAATAAGAGAAATCAA
. : . : . : . : . : . :
rJMSF032O24- AACAGATAGGGAAAATAATAAGGTTTCAGTGGGAGATAGGACCTAGTTTAAGTTATTTTC
rJMSF030B07- AACAGATAGGGAAAATAATAAGGTTTCAGTGGGAGATAGGACCTAGTTTAAGTTATTTTC
____________________________________________________________
consensus AACAGATAGGGAAAATAATAAGGTTTCAGTGGGAGATAGGACCTAGTTTAAGTTATTTTC
. : . : . : . : . : . :
rJMSF032O24- TTCAATTGCCAGAGCTATAAGGATAGATGCCATCCGCCAAATTTTAAAAACAATAAGCAT
rJMSF002O22- AAGCAT
rJMSF030B07- TTCAATTGCCAGAGCTATAAGGATAGATGCCATCCGCCAAATTTTAAAAACAATAAGCAT
____________________________________________________________
consensus TTCAATTGCCAGAGCTATAAGGATAGATGCCATCCGCCAAATTTTAAAAACAATAAGCAT
. : . : . : . : . : . :
rJMSF032O24- TTGCCAAATATTGGAAATTTTCTTCTATTTTCCTTTACTCATAATTTACGTAATCAAGTT
rJMSF002O22- TTGCCAAATATTGGAAATTTTCTTCTATTTTCCTTTACTCATAATTTACGTAATCAAGTT
rJMSF030B07- TTGCCAAATATTGGAAATTTTCTTCTATTTTCCTTTACTCATAATTTACGTAATCAAGTT
____________________________________________________________
consensus TTGCCAAATATTGGAAATTTTCTTCTATTTTCCTTTACTCATAATTTACGTAATCAAGTT
. : . : . : . : . : . :
rJMSF032O24- TCAAGGCAATCCTTGACACCCTGCTCAAAGCTGTTGAGAGAAGATACTGTATCCATAAGC
rJMSF002O22- TCAAGGCAATCCTTGACACCCTGCTCAAAGCTGTTGAGAGAAGATACTGTATCCATAAGT
rJMSF030B07- TCAAGGCAATCCTTGACACCCTGCTCAAAGCTGTTGAGAGAAGATACTGTATCCATAAGT
____________________________________________________________
consensus TCAAGGCAATCCTTGACACCCTGCTCAAAGCTGTTGAGAGAAGATACTGTATCCATAAGT
. : . : . : . : . : . :
rJMSF032O24- GCATCTGCTATCTTCTGTCTGTTGGAAGCAACTTGAATATCGAGTTCACTTGTCATGCCA
rJMSF002O22- GCATCTGCTATCTTCTGTCTGTTGGAAGCAACTTGAATATCGAGTTCACTTGTCATGCCA
rJMSF030B07- GCATCTGCTATCTTCTGTCTGTTGGAAGCAACTTGAATATCGAGTTCACTTGTCATGCCA
JMSF030B07+ ATCTTCTGTCTGTTGGAAGCAACTTGAATATCGAGTTCACTTGTCATGCCA
JMSF032O24+ TCTGTCTGTTGGAAGCAACTTGAATATCGAGTTCACTTGTCATGCCA
____________________________________________________________
consensus GCATCTGCTATCTTCTGTCTGTTGGAAGCAACTTGAATATCGAGTTCACTTGTCATGCCA
. : . : . : . : . : . :
rJMSF032O24- TTCAGAGAAGCAAAGCATCTTATTACATCAGTGAGCTTAGATTCAGCTTCCAACTTTATG
rJMSF002O22- TTCAGAGAAGCAAAGCATCTTATTACATCAGTGAGCTTAGATTCAGCTTCCAACTTTATG
rJMSF030B07- TTCAGAGAAGCAAAGCATCTTATTACATCAGTGAGCTTAGATTCAGCTTCCAACTTTATG
JMSF030B07+ TTCAGAGAAGCAAAGCATCTTATTACATCAGTGAGCTTAGATTCAGCTTCCAACTTTATG
JMSF032O24+ TTCAGAGAAGCAAAGCATCTTATTACATCAGTGAGCTTAGATTCAGCTTCCAACTTTATG
____________________________________________________________
consensus TTCAGAGAAGCAAAGCATCTTATTACATCAGTGAGCTTAGATTCAGCTTCCAACTTTATG
. : . : . : . : . : . :
rJMSF032O24- GGATCCTTGTCATCAAGTAAAGAAGAAGCGTTGTTCACGACCAGCTGAAACGTGCAGACC
rJMSF002O22- GGATCCTTGTCATCAAGTAAAGAAGAAGCGTTGTTCACGACCAGCTGAAACGTGCAGACC
rJMSF030B07- GGATCCTTGTCATCAAGTAAAGAAGAAGCGTTGTTCACGACCAGCTGAAACGTGCAGACC
JMSF030B07+ GGATCCTTGTCATCAAGTAAAGAAGAAGCGTTGTTCACGACCAGCTGAAACGTGCAGACC
JMSF032O24+ GGATCCTTGTCATCAAGTAAAGAAGAAGCGTTGTTCACGACCAGCTGAAACGTGCAGACC
____________________________________________________________
consensus GGATCCTTGTCATCAAGTAAAGAAGAAGCGTTGTTCACGACCAGCTGAAACGTGCAGACC
. : . : . : . : . : . :
rJMSF032O24- TCGACTCCAGTTTTGGATTGAAACTGAACGAAAGAATTCCTATCTTGAGGGACGCAATCC
rJMSF002O22- TCGACTCCAGTTTTGGATTGAAACTGAACGAAAGAATTCCTATCTTGAGGGACGCAATCC
rJMSF030B07- TCGACTCCAGTTTTGGATTGAAACTGAACGAAAGAATTCCTATCTTGAGGGACGCAATCC
JMSF030B07+ TCGACTCCAGTTTTGGATTGAAACTGAACGAAAGAATTCCTATCTTGAGGGACGCAATCC
JMSF032O24+ TCGACTCCAGTTTTGGATTGAAACTGAACGAAAGAATTCCTATCTTGAGGGACGCAATCC
____________________________________________________________
consensus TCGACTCCAGTTTTGGATTGAAACTGAACGAAAGAATTCCTATCTTGAGGGACGCAATCC
. : . : . : . : . : . :
rJMSF032O24- CTAGCAGCAGACTTTAGTAAGCTCTGAATTTCACCCAAATCCTTCTCACTAAATTCTGGT
rJMSF002O22- CTAGCAGCAGACTTTAGTAAGCTCTGAATTTCACCCAAATCCTTCTCACTAAATTCTGGT
rJMSF030B07- CTAGCAGCAGACTTTAGTAAGCTCTGAATTTCACCCAAATCCTTCTCACTAAATTCTGGT
JMSF030B07+ CTAGCAGCAGACTTTAGTAAGCTCTGAATTTCACCCAAATCCTTCTCACTAAATTCTGGT
JMSF032O24+ CTAGCAGCAGACTTTAGTAAGCTCTGAATTTCACCCAAATCCTTCTCACTAAATTCTGGT
____________________________________________________________
consensus CTAGCAGCAGACTTTAGTAAGCTCTGAATTTCACCCAAATCCTTCTCACTAAATTCTGGT
. : . : . : . : . : . :
rJMSF032O24- CCACTTTTCATAAGCNAAAGATAGGCAGCCT
rJMSF002O22- CCACTTTTCATAAGCAAAAGATAGGCAGCCTGGAGGCTATTGCGAGAGGCATCAACAGGA
rJMSF030B07- CCACTTTTCATAAGCAAAAGATAGGCAGCCTGGAGGCTATTGCGAGAGGCATCAACAGGA
JMSF002O22+ A
JMSF030B07+ CCACTTTTCATAAGCAAAAGATAGGCAGCCTGGAGGCTATTGCGAGAGGCATCAACAGGA
JMSF032O24+ CCACTTTTCATAAGCAAAAGATAGGCAGCCTGGAGGCTATTGCGAGAGGCATCAACAGGA
____________________________________________________________
consensus CCACTTTTCATAAGCAAAAGATAGGCAGCCTGGAGGCTATTGCGAGAGGCATCAACAGGA
. : . : . : . : . : . :
rJMSF002O22- GCCAATAGGAACTTAGCGGACTTCTTCTTCTGCTCTTTAAGCCACTGTTTTGGTCCTGAN
rJMSF030B07- GCCAATAGGAACTTAGCGGACTTCTTCTTCTGCTCTTTAAGCCACTGTTTTGGTCCTGAG
JMSF002O22+ GCCAATAGGAACTTAGCGGACTTCTTCTTCTGCTCTTTAAGCCACTGTTTTGGTCCTGAG
JMSF030B07+ GCCAATAGGAACTTAGCGGACTTCTTCTTCTGCTCTTTAAGCCACTGTTTTGGTCCTGAG
JMSF032O24+ GCCAATAGGAACTTAGCGGACTTCTTCTTCTGCTCTTTAAGCCACTGTTTTGGTCCTGAG
____________________________________________________________
consensus GCCAATAGGAACTTAGCGGACTTCTTCTTCTGCTCTTTAAGCCACTGTTTTGGTCCTGAG
. : . : . : . : . : . :
rJMSF002O22- ATGCCNAGCGAGAAT
rJMSF030B07- ATGCCAAGCGAGAATGC
JMSF002O22+ ATGCCAAGCGAGAATGCAGACGCCGGGGAAGGATGGTGGAGAGCAGGAAGCAGGGGAGCG
JMSF030B07+ ATGCCAAGCGAGAATGCAGACGCCGGGGAAGGATGGTGGAGAGCAGGAAGCAGGGGAGCG
JMSF032O24+ ATGCCAAGCGAGAATGCAGACGCCGGGGAAGGATGGTGGAGAGCAGGAAGCAGGGGAGCG
____________________________________________________________
consensus ATGCCAAGCGAGAATGCAGACGCCGGGGAAGGATGGTGGAGAGCAGGAAGCAGGGGAGCG
. : . : . : . : . : . :
JMSF002O22+ ACTAAGGAGA
JMSF030B07+ ACTAAGGAGAGTAAAACGACGGCGTTGCGGCGGGAGATCAGCTTGACATCGAGCTGTGGT
JMSF032O24+ ACTAAGGAGAGTAAAACGACGGCGTTGCGGCGGGAGATCAGCTTGACATCGAGCTGTGGT
____________________________________________________________
consensus ACTAAGGAGAGTAAAACGACGGCGTTGCGGCGGGAGATCAGCTTGACATCGAGCTGTGGT
. : . : . : . : . : . :
JMSF030B07+ GAATTGGGGGGTTTTGGCGGGAGTGGAGCGACGGCGGAAGAGGAGATAAGGAAGACACCT
JMSF032O24+ GAATTGGGGGGTTTTGGCGGGAGTGGAGCGACGGCGGAAGAGGAGATAAGGAAGACACCT
____________________________________________________________
consensus GAATTGGGGGGTTTTGGCGGGAGTGGAGCGACGGCGGAAGAGGAGATAAGGAAGACACCT
. : . : . : . : . : . :
JMSF030B07+ GGCGGCGACATGGTAGACGGTTAAAGGCTCAACGGTCT
JMSF032O24+ GGCGGCGACATGGTAGACGGTTAAAGGCTCAACGGTCTATTCTCCAGTTTCCACTTTCTC
____________________________________________________________
consensus GGCGGCGACATGGTAGACGGTTAAAGGCTCAACGGTCTATTCTCCAGTTTCCACTTTCTC