Contig 013429:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF031N22Sequence641013429 (2)ref|XP_009599708.1|159PREDICTED: uncharacterized protein LOC104095314 [Nicotiana tomentosiformis]691013429 (2)

Alignment

This contig is upended


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rJMSF031N22-                          CAAGATTGTATCACGTGACTCCACATTATGATAAATCAAGTGAG
                      ____________________________________________________________
consensus                             CAAGATTGTATCACGTGACTCCACATTATGATAAATCAAGTGAG
 
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rJMSF031N22-          AAAATTTGTGATTAAGAAATAAGAAATATCTGGATAAGGCTGGAGATGACGGCGAAGAAG
                      ____________________________________________________________
consensus             AAAATTTGTGATTAAGAAATAAGAAATATCTGGATAAGGCTGGAGATGACGGCGAAGAAG
 
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rJMSF031N22-          CAAAAATGTGACGCGTAGAAATAAGATGCCACCAGAAGCTCCAGAAATTTCGACACGTAA
                      ____________________________________________________________
consensus             CAAAAATGTGACGCGTAGAAATAAGATGCCACCAGAAGCTCCAGAAATTTCGACACGTAA
 
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rJMSF031N22-          CTTTTCATTCATCACTGCACCGCCGCCGACACGTATATAAGCATCATATCCTAAATTTGG
                      ____________________________________________________________
consensus             CTTTTCATTCATCACTGCACCGCCGCCGACACGTATATAAGCATCATATCCTAAATTTGG
 
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rJMSF031N22-          TTAAGCAGAGTAAGAATTGAATCATTCTACATAGGACGGTAAAATTAAAACTATAAATTT
                      ____________________________________________________________
consensus             TTAAGCAGAGTAAGAATTGAATCATTCTACATAGGACGGTAAAATTAAAACTATAAATTT
 
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rJMSF031N22-          CTTGTTCCTTTGTCGCATACGAAGCCAGATCTTAAGTATGTATGCTAGATTAGCAGCAAA
                      ____________________________________________________________
consensus             CTTGTTCCTTTGTCGCATACGAAGCCAGATCTTAAGTATGTATGCTAGATTAGCAGCAAA
 
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rJMSF031N22-          GCTGAATCGTCCCCTTCTAGGATTGATTCCGAGGAATCAATACTGTCTGCCGGAAAGACT
                      ____________________________________________________________
consensus             GCTGAATCGTCCCCTTCTAGGATTGATTCCGAGGAATCAATACTGTCTGCCGGAAAGACT
 
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rJMSF031N22-          TTTGTCGGCCTCGGTAGGCCGGACAGCGGACCCTGATGTTCATGGCGGTGATGTTGATGT
JMSF031N22+                                GACAGCGGACCCTGATGTTCATGGCGGTGATGTTGATGT
                      ____________________________________________________________
consensus             TTTGTCGGCCTCGGTAGGCCGGACAGCGGACCCTGATGTTCATGGCGGTGATGTTGATGT
 
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rJMSF031N22-          AAGTAATAAGTAGTTGGTTCTTCATTCTTGATACGTGGCTAGCTAGCTGCGTGTGAATAT
JMSF031N22+           AAGTAATAAGTAGTTGGTTCTTCATTCTTGATACGTGGCTAGCTAGCTGCGTGTGAATAT
                      ____________________________________________________________
consensus             AAGTAATAAGTAGTTGGTTCTTCATTCTTGATACGTGGCTAGCTAGCTGCGTGTGAATAT
 
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rJMSF031N22-          ATATAATTATGATTTATATATATATGCAGGAATATGATGCCGCGGAGGCGAAGAAGGCGG
JMSF031N22+           ATATAATTATGATTTATATATATATGCAGGAATATGATGCCGCGGAGGCGAAGAAGGCGG
                      ____________________________________________________________
consensus             ATATAATTATGATTTATATATATATGCAGGAATATGATGCCGCGGAGGCGAAGAAGGCGG
 
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rJMSF031N22-          AAACGGCGAAGGGGGAATCGGAGATTAAACCCAGCAACACCGGGAAAGTTCCATATTCGC
JMSF031N22+           AAACGGCGAAGGGGGAATCGGAGATTAAACCCAGCAACACCGGGAAAGTTCCATATTCGC
                      ____________________________________________________________
consensus             AAACGGCGAAGGGGGAATCGGAGATTAAACCCAGCAACACCGGGAAAGTTCCATATTCGC
 
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rJMSF031N22-          CGTCGAAATCCCCTTGTGGGTCATCGCCCAAGATAGAGAGCTCCGGC             
JMSF031N22+           CGTCGAAATCCCCTTGTGGGTCATCGCCCAAGATAGAGAGCTCCGGCGTGAACGATCGCA
                      ____________________________________________________________
consensus             CGTCGAAATCCCCTTGTGGGTCATCGCCCAAGATAGAGAGCTCCGGCGTGAACGATCGCA
 
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JMSF031N22+           TAGAGCCAAACCTCCAACAAAAGCGTCGCAACTCTAACGCTTCAACAACAGACGTGGGCG
                      ____________________________________________________________
consensus             TAGAGCCAAACCTCCAACAAAAGCGTCGCAACTCTAACGCTTCAACAACAGACGTGGGCG
 
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JMSF031N22+           CGGGGTTGGACGGCGGCCCGTGGCCGGATGACGCGACGGACCGGCGCCGACAAGAAGACG
                      ____________________________________________________________
consensus             CGGGGTTGGACGGCGGCCCGTGGCCGGATGACGCGACGGACCGGCGCCGACAAGAAGACG
 
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JMSF031N22+           ACAACAGGGAATACTTCAAGCACCACAAGGCGTCGCCGTTGTCGGGCTTAAAGATGGCCG
                      ____________________________________________________________
consensus             ACAACAGGGAATACTTCAAGCACCACAAGGCGTCGCCGTTGTCGGGCTTAAAGATGGCCG
 
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JMSF031N22+           ACACAAGAAAGCCGATAACGCGAGCAACCGACAGCAGCGGCGGAGCCGCCGCAGGAGGTG
                      ____________________________________________________________
consensus             ACACAAGAAAGCCGATAACGCGAGCAACCGACAGCAGCGGCGGAGCCGCCGCAGGAGGTG
 
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JMSF031N22+           TGGTGGTGTGGCTGCCGGAGCAGCTGGAATCGGCGGAGGATACGCTGTTGAGAGCCATGG
                      ____________________________________________________________
consensus             TGGTGGTGTGGCTGCCGGAGCAGCTGGAATCGGCGGAGGATACGCTGTTGAGAGCCATGG
 
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JMSF031N22+           AAATTTGGAAACAAAACGCCGCGAGGGGCGACCCAGATTCCCCGCACGGCAAGATTCTCC
                      ____________________________________________________________
consensus             AAATTTGGAAACAAAACGCCGCGAGGGGCGACCCAGATTCCCCGCACGGCAAGATTCTCC