| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS016H06 | Sequence | 622 | 013427 (7) | ref|XP_009788433.1| | 4e-77 | PREDICTED: SCY1-like protein 2 [Nicotiana sylvestris] | |||||
| JMFS033B02 | Sequence | 565 | 013427 (7) | gb|EYU22712.1| | 8e-52 | hypothetical protein MIMGU_mgv1a000991mg [Erythranthe guttata] | |||||
| JMFS137E08 | Sequence | 401 | 013427 (7) | ref|XP_009788433.1| | 3e-26 | PREDICTED: SCY1-like protein 2 [Nicotiana sylvestris] | |||||
| JMSF019B14 | Sequence | 520 | 013427 (7) | ref|XP_009788433.1| | 2e-48 | PREDICTED: SCY1-like protein 2 [Nicotiana sylvestris] | 678 | 013981 (4) | emb|CDP20126.1| | 1e-11 | unnamed protein product [Coffea canephora] |
| JMSF026B06 | Sequence | 643 | 013427 (7) | ref|XP_009788433.1| | 4e-81 | PREDICTED: SCY1-like protein 2 [Nicotiana sylvestris] | 694 | 013981 (4) | emb|CDP20126.1| | 8e-10 | unnamed protein product [Coffea canephora] |
| JMSF031H18 | Sequence | 654 | 013427 (7) | ref|XP_009788433.1| | 4e-82 | PREDICTED: SCY1-like protein 2 [Nicotiana sylvestris] | 582 | 013981 (4) | |||
| JMSF040P05 | Sequence | 614 | 013427 (7) | ref|XP_009788433.1| | 4e-83 | PREDICTED: SCY1-like protein 2 [Nicotiana sylvestris] | 695 | 013981 (4) | emb|CDP20126.1| | 6e-06 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
JMFS033B02+ GCAAGACACCCAAAACTGAAAATATCGGAGGAGCATCCAATAGAACTTGTGTTAC
____________________________________________________________
consensus GCAAGACACCCAAAACTGAAAATATCGGAGGAGCATCCAATAGAACTTGTGTTAC
. : . : . : . : . : . :
JMFS033B02+ TTCGAACCAATTCAGGAGCAGTGTAGTTCAATGATGGCTGAAGGGGCATAATAGAATCTT
____________________________________________________________
consensus TTCGAACCAATTCAGGAGCAGTGTAGTTCAATGATGGCTGAAGGGGCATAATAGAATCTT
. : . : . : . : . : . :
JMFS033B02+ CAACATCGTATTCAGCATAATGGAAAGACTGCATGTTGGATGGATCACTAGATGACGGAT
____________________________________________________________
consensus CAACATCGTATTCAGCATAATGGAAAGACTGCATGTTGGATGGATCACTAGATGACGGAT
. : . : . : . : . : . :
JMFS033B02+ TTGTTGATAATGCAAAACTAAATCCAGCAAGCTTCCAAGCTCCATTTGAGGTAATGAGGA
____________________________________________________________
consensus TTGTTGATAATGCAAAACTAAATCCAGCAAGCTTCCAAGCTCCATTTGAGGTAATGAGGA
. : . : . : . : . : . :
JMFS033B02+ CAGTCTCAGGAGATATAGCCCGATGAACAAGACGGGCATTGTTGTGAAGGAAATCCAAGG
____________________________________________________________
consensus CAGTCTCAGGAGATATAGCCCGATGAACAAGACGGGCATTGTTGTGAAGGAAATCCAAGG
. : . : . : . : . : . :
JMFS033B02+ TTTCTGCCAACTGAAGTAACCCATTGTTTCACCTCTAGTAATCCCATTTCTATTCCTTTG
____________________________________________________________
consensus TTTCTGCCAACTGAAGTAACCCATTGTTTCACCTCTAGTAATCCCATTTCTATTCCTTTG
. : . : . : . : . : . :
JMFS033B02+ AGCTCCTTCGGCACTTTCTCAATGTTCTCCAAAATCCCCAGGGCATTCGCAGCCGAAGCA
JMSF040P05+ CACTTTCTCAATGTTCTCCAAAATCCCCAGGGCATTCGCAGCCGAAGCA
JMSF026B06+ CACTTTCTCAATGTTCTCCAAAATCCCCAGGGCATTCGCAGCCGAAGCA
JMFS016H06+ TCAATGTTCTCCANAATCCNCAGGGCATTCGCAGCCGAAGCA
JMSF031H18+ CACTTTCTCAATGTTCTCCAAAATCCCCAGGGCATTCGCAGCCGAAGCA
____________________________________________________________
consensus AGCTCCTTCGGCACTTTCTCAATGTTCTCCAAAATCCCCAGGGCATTCGCAGCCGAAGCA
. : . : . : . : . : . :
JMFS033B02+ AATAACGGCTCAGTAACCATCGCCATGGCATTCTTGCTCTCATCCAGGGCCTGCACCACA
JMSF040P05+ AATAACGGCTCAGTAACCATCGCCATGGCATTCTTGCTCTCATCCAGGGCCTGCACCACA
JMSF026B06+ AATAACGGCTCAGTAACCATCGCCATGGCATTCTTGCTCTCATCCAGGGCCTGCACCACA
JMFS016H06+ AATAACGGCTCAGTAACCATCGCCATGGCATTCTTGCTCTCATCCAGGGCCTGCACCACA
JMSF031H18+ AATAACGGCTCAGTAACCATCGCCATGGCATTCTTGCTCTCATCCAGGGCCTGCACCACA
____________________________________________________________
consensus AATAACGGCTCAGTAACCATCGCCATGGCATTCTTGCTCTCATCCAGGGCCTGCACCACA
. : . : . : . : . : . :
JMFS033B02+ TGCACCACTCCAGGGTGCCTCAGCCGTACCAGCCGTGCAGCATCGGCGCGAATCATATCG
JMSF040P05+ TGCACCACTCCAGGGTGCCTCAGCCGTACCAGCCGTGCAGCATCGGCGCGAATCATATCG
JMSF026B06+ TGCACCACTCCAGGGTGCCTCAGCCGTACCAGCCGTGCAGCATCGGCGCGAATCATATCG
JMFS016H06+ TGCACCACTCCAGGGTGCCTCAGCCGTACCAGCCGTGCAGCATCGGCGCGAATCATATCG
JMSF019B14+ TCAGCCGTACCAGCCGTGCAGCATCGGCGCGAATCATATCG
JMSF031H18+ TGCACCACTCCAGGGTGCCTCAGCCGTACCAGCCGTGCAGCATCGGCGCGAATCATATCG
____________________________________________________________
consensus TGCACCACTCCAGGGTGCCTCAGCCGTACCAGCCGTGCAGCATCGGCGCGAATCATATCG
. : . : . : . : . : . :
JMFS033B02+ AAGAACGCATCCTCAGCCGTCTTTGAGAGC
JMSF040P05+ AAGAACGCATCCTCAGCCGTCTTTGAGAGCCCAGCTCGCTGCCGAGCTTCGGAGAGAGCA
JMSF026B06+ AAGAACGCATCCTCAGCCGTCTTTGAGAGCCCAGCTCGCTGCCGAGCTTCGGAGAGAGCA
JMFS016H06+ AAGAACGCATCCTCAGCCGTCTTTGAGAGCCCAGCTCGCTGCCGAGCTTCGGAGAGAGCA
JMFS137E08+ CA
JMSF019B14+ AAGAACGCATCNTCAGCCGTCTTTGAGAGCCCAGCTCGCTGCCGAGCTTCGGAGAGAGCA
JMSF031H18+ AAGAACGCATCCTCAGCCGTCTTTGAGAGCCCAGCTCGCTGCCGAGCTTCGGAGAGAGCA
____________________________________________________________
consensus AAGAACGCATCCTCAGCCGTCTTTGAGAGCCCAGCTCGCTGCCGAGCTTCGGAGAGAGCA
. : . : . : . : . : . :
JMSF040P05+ CGCTTATCGAGAACCCACACGCAGACGTTAGGATAAACCGCGTGTCCGTCTCTGGCCTTG
JMSF026B06+ CGCTTATCGAGAACCCACACGCAGACGTTAGGATAAACCGCGTGTCCGTCTCTGGCCTTG
JMFS016H06+ CGCTTATCGAGAACCCACACGCAGACGTTAGGATAAACCGCGTGTCCGTCTCTGGCCTTG
JMFS137E08+ CGCTTATCGAGAACCCACACGCAGACGTTAGGATAATCCGCGTGTCCGTCTCTGGCCTTG
JMSF019B14+ CGCTTATCGAGAACCCACACGCAGACGTTAGGATAAACCGCGTGTCCGTCTCTGGCCTTG
JMSF031H18+ CGCTTATCGAGAACCCACACGCAGACGTTAGGATAAACCGCGTGTCCGTCTCTGGCCTTG
____________________________________________________________
consensus CGCTTATCGAGAACCCACACGCAGACGTTAGGATAAACCGCGTGTCCGTCTCTGGCCTTG
. : . : . : . : . : . :
JMSF040P05+ GCAGAGTAGAGCTTCCAGACAAGGCCGGGCCCGGCTGACCCGATCTGATCGAAGAGCTCG
JMSF026B06+ GCAGAGTAGAGCTTCCAGACAAGGCCGGGCCCGGCTGACCCGATCTGATCGAAGAGCTCG
JMFS016H06+ GCAGAGTAGAGCTTCCAGACAAGGCCGGGCCCGGCTGACCCGATCTGATCGAAGAGCTCG
JMFS137E08+ GCAGAGTAGAGCTTCCAGACAAGGCCGGGCCCGGCTGACCCGATCTGATCGAAGAGCTCG
JMSF019B14+ GCAGAGTAGAGCTTCCAGACAAGGCCGGGCCCGGCTGACCCGATCTGATCGAAGAGCTCG
JMSF031H18+ GCAGAGTAGAGCTTCCAGACAAGGCCGGGCCCGGCTGACCCGATCTGATCGAAGAGCTCG
____________________________________________________________
consensus GCAGAGTAGAGCTTCCAGACAAGGCCGGGCCCGGCTGACCCGATCTGATCGAAGAGCTCG
. : . : . : . : . : . :
JMSF040P05+ AAGTCCTGCAAAGCGCGTGGACCGGTGACCTCCTGCACCGTGGTCTGCACGGTCTTCTCG
JMSF026B06+ AAGTCCTGCAAAGCGCGTGGACCGGTGACCTCCTGCACCGTGGTCTGCACGGTCTTCTCG
JMFS016H06+ AAGTCCTGCAAAGCGCGTGGACCGGTGACCTCCTGCACCGTGGTCTGCACGGTCTTCTCG
JMFS137E08+ AAGTCCTGCAAAGCGCGTGGACCGGTGACCTCCTGCACCGTGGTCTGCACGGTCTTCTCG
JMSF019B14+ AAGTCCTGCAAAGCGCGTGGACCGGTGACCTCCTGCACCGTGGTCTGCACGGTCTTCTCG
JMSF031H18+ AAGTCCTGCAAAGCGCGTGGACCGGTGACCTCCTGCACCGTGGTCTGCACGGTCTTCTCG
____________________________________________________________
consensus AAGTCCTGCAAAGCGCGTGGACCGGTGACCTCCTGCACCGTGGTCTGCACGGTCTTCTCG
. : . : . : . : . : . :
JMSF040P05+ ATCACGGCCGACGCCTTGGCCAAGGCTTCCGTGAAGGTTTTCTTCATGTTGAGGGACACG
JMSF026B06+ ATCACGGCCGACGCCTTGGCCAAGGCTTCCGTGAAGGTTTTCTTCATGTTGAGGGACACG
JMFS016H06+ ATCACGGCCGACGCCTTGGCCAAGGCTTCCGTGAAGGTTTTCTTCATGTTGAGGGACACG
JMFS137E08+ ATCACGGCCGACGCCTTGGCCAAGGCTTCCGTGAAGGTTTTCTTCATGTTGAGGGACACG
JMSF019B14+ ATCACGGCCGACGCCTTGGCCAAGGCTTCCGTGAAGGTTTTCTTCATGTTGAGGGACACG
JMSF031H18+ ATCACGGCCGACGCCTTGGCCAAGGCTTCCGTGAAGGTTTTCTTCATGTTGAGGGACACG
____________________________________________________________
consensus ATCACGGCCGACGCCTTGGCCAAGGCTTCCGTGAAGGTTTTCTTCATGTTGAGGGACACG
. : . : . : . : . : . :
JMSF040P05+ AGTGGAAATTACTGAGTTTCAGTGCGGCAGTTTCCAGACTTCCTGGCACTTAATCAGATC
JMSF026B06+ AGTGGAAATTANTGAGTTTCAGTGCGGCAGTTTCCAGACTTCCTGGCACTTAATCAGATC
JMFS016H06+ AGTGGAAATTACTGAGTTTCAGTGCGGCAGTTTCCAGACTTCCTGGCACTTAATCAGATC
JMFS137E08+ AGTGGAAATTACTGAGTTTCAGTGCGGCAGTTTCCAGACTTCCTGGCACTTAATCAGATC
JMSF019B14+ AGTGGAAATTACTGAGTTTCAGTGCGGCAGTTTCCAGACTTCCTGGCACTTAATCAGATC
JMSF031H18+ AGTGGAAATTACTGAGTTTCAGTGCGGCAGTTTCCAGACTTCCTGGCACTTAATCAGATC
____________________________________________________________
consensus AGTGGAAATTACTGAGTTTCAGTGCGGCAGTTTCCAGACTTCCTGGCACTTAATCAGATC
. : . : . : . : . : . :
JMSF040P05+ ACTGAATCCGGCTGCTGCGGCGGCGTTGTCGGTGGCGGCCGGTGGCGGAGGAATTGAATT
JMSF026B06+ ACTGAATCCGGCTGCTGCGGCGGCGTTGTCGGTGGCGGCCGGTGGCGGAGGAATTGAATT
JMFS016H06+ ACTGAATCCGGCTGCTGCGGCGGCGTTGTCGGTGGCGGCCGGTGGCGGAGGAATTGAATT
JMFS137E08+ ACTGAATCCGGCTGCTGCGGCGGCGTTGTCGGTGGCGGCCGGTGGCGGAGGAATTGAATT
JMSF019B14+ ACTGAATCCGGCTGCTGCGGCGGCGTTGTCGGTGGCGGCCGGTGGCGGAGGAATTGAATT
JMSF031H18+ ACTGAATCCGGCTGCTGCGGCGGCGTTGTCGGTGGCGGCCGGTGGCGGAGGAATTGAATT
____________________________________________________________
consensus ACTGAATCCGGCTGCTGCGGCGGCGTTGTCGGTGGCGGCCGGTGGCGGAGGAATTGAATT
. : . : . : . : . : . :
JMSF040P05+ GACGGAAGAGAAGATCG
JMSF026B06+ GACGGAAGAGAAGATCGGATGATTCAGATCCCACCTTGACACCTTCCCTC
JMFS016H06+ GACGGAAGAGAAGATCGGATGATTCAGATCCCACCTTGAC
JMFS137E08+ GACGGAAGAGAAGATCGGATGATTCAGATCCCACCTTGA
JMSF019B14+ GACGGAAGAGAAGATCGGATGATTCAGATCCCACCTTGACACCTTCCCTCAGTCTCCGT
JMSF031H18+ GACGGAAGAGAAGATCGGATGATTCAGATCCCACCTTGACACCTTCCCTCAGTCTCCGTC
____________________________________________________________
consensus GACGGAAGAGAAGATCGGATGATTCAGATCCCACCTTGACACCTTCCCTCAGTCTCCGTC