| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF006O18 | Sequence | 602 | 013425 (6) | ref|XP_006358050.1| | 133 | PREDICTED: uncharacterized protein LOC102580323 [Solanum tuberosum] | 397 | 013425 (6) | ref|XP_009593392.1| | 162 | PREDICTED: uncharacterized protein LOC104090063 [Nicotiana tomentosiformis] |
| JMFN003D20 | Sequence | 587 | 013425 (6) | ref|XP_006358050.1| | 154 | PREDICTED: uncharacterized protein LOC102580323 [Solanum tuberosum] | |||||
| JMSF025I03 | Sequence | 687 | 023198 | ref|XP_010265236.1| | 234 | PREDICTED: uncharacterized protein LOC104603026 [Nelumbo nucifera] | 759 | 013425 (6) | emb|CDP02794.1| | 1e-26 | unnamed protein product [Coffea canephora] |
| JMSF031F09 | Sequence | 670 | 013425 (6) | ref|XP_006358050.1| | 192 | PREDICTED: uncharacterized protein LOC102580323 [Solanum tuberosum] | 758 | 013425 (6) | ref|XP_009593392.1| | 326 | PREDICTED: uncharacterized protein LOC104090063 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMSF025I03+ AAGAGGAGGAAAAGCGTTGAAGCAGAAACTACAGGATAACATTGCTGAAGCAGTCATTTC
____________________________________________________________
consensus AAGAGGAGGAAAAGCGTTGAAGCAGAAACTACAGGATAACATTGCTGAAGCAGTCATTTC
. : . : . : . : . : . :
rJMSF025I03+ AAAGAATGGTGCTCCCATTACAGTATCGGGAGCATGATGCCATTGTTGCTAAAGTTAAGC
____________________________________________________________
consensus AAAGAATGGTGCTCCCATTACAGTATCGGGAGCATGATGCCATTGTTGCTAAAGTTAAGC
. : . : . : . : . : . :
rJMSF025I03+ TTGAGACAGCAGAAGCTCATGCTGCATTGCTGGAGTCCAAAGGCTTATGGTTAAAATGTA
____________________________________________________________
consensus TTGAGACAGCAGAAGCTCATGCTGCATTGCTGGAGTCCAAAGGCTTATGGTTAAAATGTA
. : . : . : . : . : . :
rJMSF025I03+ ATCAAAACGCTGATGCTGTTAGAACAGAGCCCATCTATGTGGACACCAATGGTCAGGTGC
____________________________________________________________
consensus ATCAAAACGCTGATGCTGTTAGAACAGAGCCCATCTATGTGGACACCAATGGTCAGGTGC
. : . : . : . : . : . :
rJMSF025I03+ TGTGGAGATTGAAAAGCTACTCTGAGAAATCTGAAATACTACTTCAAGAGGTTGGAACTG
____________________________________________________________
consensus TGTGGAGATTGAAAAGCTACTCTGAGAAATCTGAAATACTACTTCAAGAGGTTGGAACTG
. : . : . : . : . : . :
rJMSF025I03+ GGGATGATGCATCACATGAAAAATGGTCTACTTTTGATGTGGAACAGAAAGAAATAGTTG
____________________________________________________________
consensus GGGATGATGCATCACATGAAAAATGGTCTACTTTTGATGTGGAACAGAAAGAAATAGTTG
. : . : . : . : . : . :
rJMSF025I03+ AGAAGCGGATTGACTCTTTGAGGCACAAAAGGATCAGGGTTCCAGGGAAACCTCCATTGC
____________________________________________________________
consensus AGAAGCGGATTGACTCTTTGAGGCACAAAAGGATCAGGGTTCCAGGGAAACCTCCATTGC
. : . : . : . : . : . :
rJMSF025I03+ AGAGCAATGAAAGCTGAGCAGTAGTAATTCATCAAGATTAGTGCTGTGATACAGAGCCTC
____________________________________________________________
consensus AGAGCAATGAAAGCTGAGCAGTAGTAATTCATCAAGATTAGTGCTGTGATACAGAGCCTC
. : . : . : . : . : . :
rJMSF025I03+ AAGGAGCACAAGTGTAGAACTTATGTAGCATAGCTTCATTAGCATTTTTGCAAACATATA
____________________________________________________________
consensus AAGGAGCACAAGTGTAGAACTTATGTAGCATAGCTTCATTAGCATTTTTGCAAACATATA
. : . : . : . : . : . :
rJMSF025I03+ CATTCAATGTTTTTGCCATTGAATTGAATGTAGGCAGTGAACCTTGTAAAAAGCAGGTCT
____________________________________________________________
consensus CATTCAATGTTTTTGCCATTGAATTGAATGTAGGCAGTGAACCTTGTAAAAAGCAGGTCT
. : . : . : . : . : . :
rJMSF025I03+ GTAAATCTGTTGTATCAAGGCAGACCCAGATTATATGAATGCCTTAAAATTAATCCTTTT
____________________________________________________________
consensus GTAAATCTGTTGTATCAAGGCAGACCCAGATTATATGAATGCCTTAAAATTAATCCTTTT
. : . : . : . : . : . :
rJMSF025I03+ CGTTGATTCTCTGTTGAAAATTTTTTACAAGCTTCCTTTTGCTATACATGGCTAAACAAC
rJMSF031F09- AATTTTTTACAAGCTTCCTTTTGCTATACATGGCTAAACAAC
____________________________________________________________
consensus CGTTGATTCTCTGTTGAAAATTTTTTACAAGCTTCCTTTTGCTATACATGGCTAAACAAC
. : . : . : . : . : . :
rJMSF025I03+ AGTTTACTATACTACATGAGCTCTTCCATTGTTGAGGAT
rJMFF006O18- TGCTANTTACNATGTT
rJMSF031F09- AGTTTACTATACTACATGAGCTCTTCCATTGTTGAGGATGTTCATGCTACTTACAATGTT
____________________________________________________________
consensus AGTTTACTATACTACATGAGCTCTTCCATTGTTGAGGATGTTCATGCTACTTACAATGTT
. : . : . : . : . : . :
rJMFF006O18- GNGTTGGAAATTANTCNGACTTCNTACAAGTANTCTTTGTCTCCCTTANCAATTTCANAT
rJMSF031F09- GTGTTGGAAATTAGTCGGACTTCATACAAGTAGTCTTTGTCTCCCTTAACAATTTCAGAT
____________________________________________________________
consensus GTGTTGGAAATTAGTCGGACTTCATACAAGTAGTCTTTGTCTCCCTTAACAATTTCAGAT
. : . : . : . : . : . :
rJMFF006O18- GAAATTCCTGGACNAAAGAAGGAAGNAAATTTTTCCCGNCTTTTTTCAAAATCTGANAGC
rJMSF031F09- GAAATTCCTGGACCAAAGAAGGAAGCAAATTTTTCCCGTCTTTTTTCAAAATCTGAGAGC
____________________________________________________________
consensus GAAATTCCTGGACCAAAGAAGGAAGCAAATTTTTCCCGTCTTTTTTCAAAATCTGAGAGC
. : . : . : . : . : . :
rJMFF006O18- TCCNAAGCTTTGGCCTCNAACACCAACACTANACAGNATTTACCATCTTCCGTAACCTCT
rJMSF031F09- TCCAAAGCTTTGGCCTCGAACACCAACACTAGACAGTATTTACCATCTTCCGTAACCTCT
____________________________________________________________
consensus TCCAAAGCTTTGGCCTCGAACACCAACACTAGACAGTATTTACCATCTTCCGTAACCTCT
. : . : . : . : . : . :
rJMFF006O18- TCNCGGATCATTTGCNAAATGGGAGCACTCCTCCGTGCAATTCCTCCACCCTGGCCNTAT
rJMSF031F09- TCGCGGATCATTTGCAAAATGGGAGCACTCCTCCGTGCAATTCCTCCACCCTGGCCATAT
____________________________________________________________
consensus TCGCGGATCATTTGCAAAATGGGAGCACTCCTCCGTGCAATTCCTCCACCCTGGCCATAT
. : . : . : . : . : . :
rJMFF006O18- TGGAANATACNTNTCAATGCCTNATCCAAATGTTGNTCATCTCCNTAACGGAACCTTGTC
rJMSF031F09- TGGAAAATACGTTTCAATGCCTCATCCAAATGTTGCTCATCTCCATAACGGAACCTTGTC
JMFN003D20+ GTC
JMFF006O18+ GTC
JMSF031F09+ TCAATGCCTCATCCAAATGTTGCTCATCTCCATAACGGAACCTTGTC
____________________________________________________________
consensus TGGAAAATACGTTTCAATGCCTCATCCAAATGTTGCTCATCTCCATAACGGAACCTTGTC
. : . : . : . : . : . :
rJMFF006O18- ACATCACTCTTGACCTGTTTAAGGATTGNAGNAACACACTTTTCCCTTANCATTTGAGCA
rJMSF031F09- ACATCACTCTTGACCTGTTTAAGGATTGGAGTAGCACACTTTTCCCTTAACATTTGAGCA
JMFN003D20+ ACATCACTCTTGACCTGTTTAAGGATTGGAGTAGCACACTTTTCCCTTAACATTTGAGCA
JMFF006O18+ ACATCACTCTTGACCTGTTTAAGGATTGGAGTAGCACACTTTTCCCTTAACATTTGAGCA
JMSF031F09+ ACATCACTCTTGACCTGTTTAAGGATTGGAGTAGCACACTTTTCCCTTAACATTTGAGCA
____________________________________________________________
consensus ACATCACTCTTGACCTGTTTAAGGATTGGAGTAGCACACTTTTCCCTTAACATTTGAGCA
. : . : . : . : . : . :
rJMFF006O18- TCTGAATANGTCACACATGGT
rJMSF031F09- TCTGAATAGGTCACACATGGTACTGGTTTAAGCTCTGCATACTTGAGGGCCATGCCAATT
JMFN003D20+ TCTGAATAGGTCACACATGGTACTGGTTTAAGCTCTGCATACTTGAGGGCCATGCCAATT
JMFF006O18+ TNTGAATAGGTCACACATGGTACTGGTTTAAGCTNTGCATACTTGAGGGCCATGCCAATT
JMSF031F09+ TCTGAATAGGTCACACATGGTACTGGTTTAAGCTCTGCATACTTGAGGGCCATGCCAATT
____________________________________________________________
consensus TCTGAATAGGTCACACATGGTACTGGTTTAAGCTCTGCATACTTGAGGGCCATGCCAATT
. : . : . : . : . : . :
rJMSF031F09- ATAGCAAGAGGAAAGCCATATGTAAGCATCAATGCAGACCACTCAGATCCAGGAATGATA
JMFN003D20+ ATAGCAAGAGGAAAGCCATATGTAAGCATCAATGCAGACCACTCAGATCCAGGAATGATA
JMFF006O18+ ATAGCAAGAGGAAAGCCATATGTAAGCATCAATGCAGACCACTCAGATCCAGGAATGATA
JMSF031F09+ ATAGCAAGAGGAAAGCCATATGTAAGCATCAATGCAGACCACTCAGATCCAGGAATGATA
____________________________________________________________
consensus ATAGCAAGAGGAAAGCCATATGTAAGCATCAATGCAGACCACTCAGATCCAGGAATGATA
. : . : . : . : . : . :
rJMSF031F09- TTAAAGTATGCTCCAAAACCATACGAGAGAAGTGAAACCCCCACA-CCAAGTCCAACAAC
JMFN003D20+ TTAAAGTATGCTCCAAAACCATACGAGAGAAGTGAAACCCCCACA-CCAAGTCCAACAAC
JMFF006O18+ TTAAAGTATGCTCCAAAACCATACGAGAGAAGTGAAACCCCCACACCCAAGTCCAACAAC
JMSF031F09+ TTAAAGTATGCTCCAAAACCATACGAGAGAAGTGAAACCCCCACA-CCAAGTCCAACAAC
____________________________________________________________
consensus TTAAAGTATGCTCCAAAACCATACGAGAGAAGTGAAACCCCCACA-CCAAGTCCAACAAC
. : . : . : . : . : . :
rJMSF031F09- ACCAAATGAAATCTTGGAAAGGGAAAATCCATCATCGTTAACGACGGACTTGTCGGAAGA
JMFN003D20+ ACCAAATGAAATCTTGGAAAGGGAAAATCCATCATCGTTAACGACGGACTTGTCGGAAGA
JMFF006O18+ ACCAAATGAAATCTTGGAAAGGGAAAATCCATCATCGTTAACGACGGACTTGTCGGAAGA
JMSF031F09+ ACCAAATGAAATCTTGGAAAGGGAAAATCCATCATCGTTAACGACGGACTTGTCGGAAGA
____________________________________________________________
consensus ACCAAATGAAATCTTGGAAAGGGAAAATCCATCATCGTTAACGACGGACTTGTCGGAAGA
. : . : . : . : . : . :
rJMSF031F09- AGTAACGGAGGAAGGCTGAGTCTGAGTTG-ATCAGCAGCTCCGCAGACTATTT
JMFN003D20+ AGTAACGGAGGAAGGCTGAGTCTGAGTTGAATCAGCAGCTCCGCAGACTATTTTAAGCCG
JMFF006O18+ AGTAACGGAGGAAGGCTGAGTCTGAGTTGAATCAGCAGCTCCGCAGACTATTTTAAGCCG
JMSF031F09+ AGTAACGGAGGAAGGCTGAGTCTGAGTTGAATCAGCAGCTCCGCAGACTATTTTAAGCCG
____________________________________________________________
consensus AGTAACGGAGGAAGGCTGAGTCTGAGTTGAATCAGCAGCTCCGCAGACTATTTTAAGCCG
. : . : . : . : . : . :
JMFN003D20+ GCGCGGATTCGCCAAAAGCGATCGTCGAGCAATGGAAGCCGCCGACCTGAACTTGCGCGT
JMFF006O18+ GCGCGGATTCGCCAAAAGCGATCGTCGAGCAATGGAAGCCGCCGACCTGAACTTGCGCGT
JMSF031F09+ GCGCGGATTCGCCAAAAGCGATCGTCGAGCAATGGAAGCCGCCGACCTGAACTTGCGCGT
____________________________________________________________
consensus GCGCGGATTCGCCAAAAGCGATCGTCGAGCAATGGAAGCCGCCGACCTGAACTTGCGCGT
. : . : . : . : . : . :
JMFN003D20+ GGAGGACAGAGATTGGTTTCGACTCAGAGAGAGTAAATGCGCGCGGTTACAAACCGCAAA
JMFF006O18+ GGAGGACAGAGATTGGTTTCGACTCAGAGAGAGTAAATGCGCGCGGTTACAAACCGCAAA
JMSF031F09+ GGAGGACAGAGATTGGTTTCGACTCAGAGAGAGTAAATGCGCGCGGTTACAAACCGCAAA
____________________________________________________________
consensus GGAGGACAGAGATTGGTTTCGACTCAGAGAGAGTAAATGCGCGCGGTTACAAACCGCAAA
. : . : . : . : . : . :
JMFN003D20+ ACGCGGCGGCGAACAGAGGATGGTTCCGCCGCTTCCTCCCGACATGGCCACAGCTGCTTT
JMFF006O18+ ACGCGGCGGCGAACAGAGGATGGTTCCGCCGCTTCCTCCCGACATGGCCACAGCTGCTTT
JMSF031F09+ ACGCGGCGGCGAACAGAGGATGGTTCCGCCGCTTCCTCCCGACATGGCCACAGCTGCTTT
____________________________________________________________
consensus ACGCGGCGGCGAACAGAGGATGGTTCCGCCGCTTCCTCCCGACATGGCCACAGCTGCTTT
. : . : . : . : . : . :
JMFN003D20+ CATCTCTCTCCGGTGATAATTCCGTTGAGGGAGAAGAAGAGGTTT
JMFF006O18+ CATCTCTCTCCGGTGATAATTCCGTTGAGGGAGAAGAAGAGGTTTTACGAGGGCACGGC
JMSF031F09+ CATCTCTCTCCGGTGATAATTCCGTTGAGGGAGAAGAAGAGGTTTTACGAGGGCACGGCC
____________________________________________________________
consensus CATCTCTCTCCGGTGATAATTCCGTTGAGGGAGAAGAAGAGGTTTTACGAGGGCACGGCC