Contig 013422:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016J15Sequence545013422 (6)ref|XP_002284242.2|2e-51PREDICTED: BTB/POZ domain-containing protein At5g67385 [Vitis vinifera]690004717 (7)ref|XP_010086959.1|2e-78BTB/POZ domain-containing protein [Morus notabilis] gb|EXB25095.1| BTB/POZ domai
JMSF019A23Sequence227013422 (6)ref|XP_009782405.1|1e-39PREDICTED: BTB/POZ domain-containing protein At5g67385 [Nicotiana sylvestris]762004717 (7)ref|XP_010086959.1|6e-79BTB/POZ domain-containing protein [Morus notabilis] gb|EXB25095.1| BTB/POZ domai
JMSF028B23Sequence638013422 (6)ref|XP_009782405.1|3e-90PREDICTED: BTB/POZ domain-containing protein At5g67385 [Nicotiana sylvestris]765004717 (7)ref|XP_010086959.1|2e-98BTB/POZ domain-containing protein [Morus notabilis] gb|EXB25095.1| BTB/POZ domai
JMSF030P03Sequence610013422 (6)704004717 (7)ref|XP_010086959.1|3e-64BTB/POZ domain-containing protein [Morus notabilis] gb|EXB25095.1| BTB/POZ domai
JMSF032C23Sequence699013422 (6)ref|XP_011099322.1|1e-84PREDICTED: BTB/POZ domain-containing protein At5g67385 [Sesamum indicum]572004717 (7)ref|XP_009782405.1|8e-38PREDICTED: BTB/POZ domain-containing protein At5g67385 [Nicotiana sylvestris]
JMSF036N02Sequence670013422 (6)ref|XP_009782405.1|2e-89PREDICTED: BTB/POZ domain-containing protein At5g67385 [Nicotiana sylvestris]687004717 (7)ref|XP_010086959.1|8e-61BTB/POZ domain-containing protein [Morus notabilis] gb|EXB25095.1| BTB/POZ domai

Alignment

This contig is upended


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JMSF032C23+                                                           CAGGCTATATAC
                      ____________________________________________________________
consensus                                                             CAGGCTATATAC
 
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JMSF032C23+           GCTATTTGATCAATGCATCGGCTCACCAGTTTCACTTTCTCCGCCATTGGGAGAAGACTC
                      ____________________________________________________________
consensus             GCTATTTGATCAATGCATCGGCTCACCAGTTTCACTTTCTCCGCCATTGGGAGAAGACTC
 
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JMSF019A23+                                       CTGCAAGGCTGTTGAGTGCAACTTCGTTTAAG
JMSF028B23+            CCGAAGAATGCAAAATGGAAACCGCCCCTGCAAGGCTGTTGAGTGCAACTTCGTTTAAG
JMSF032C23+           TCCGAAGAATGCAAAATGGAAACCGCCCCTGCAAGGCTGTTGAGTGCAACTTCGTTTAAG
JMSF036N02+            CCGAAGAATGCAAAATGGAAACCGCCCCTGCAAGGCTGTTGAGTGCAACTTCGTTTAAG
                      ____________________________________________________________
consensus             TCCGAAGAATGCAAAATGGAAACCGCCCCTGCAAGGCTGTTGAGTGCAACTTCGTTTAAG
 
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JMSF019A23+           TAGGCCTCCGTCCTCCCCACCAAGTTCCCAACCGCGTAGTCCTCAGTCATCTCGAGATAC
JMSF028B23+           TAGGCCTCCGTCCTCCCCACCAAGTTCCCAACCGCGTAGTCCTCAGTCATCTCGAGATAC
JMSF032C23+           TAGGCCTCCGTCCTCCCCACCAAGTTCCCAACCGCGTAGTCCTCAGTCATCTCGAGATAC
JMSF036N02+           TAGGCCTCCGTCCTCCCCACCAAGTTCCCAACCGCGTAGTCCTCAGTCATCTCGAGATAC
                      ____________________________________________________________
consensus             TAGGCCTCCGTCCTCCCCACCAAGTTCCCAACCGCGTAGTCCTCAGTCATCTCGAGATAC
 
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JMSF019A23+           TCTGCCGTGCATCTAAGCATGCCAATGTTCTCTGTGCTTATCTCGAAATTAATCCCATAA
JMSF028B23+           TCTGCCGTGCATCTAAGCATGCCAATGTTCTCTGTGCTTATCTCGAAATTAATCCCATAA
JMSF032C23+           TCTGCCGTGCATCTAAGCATGCCAATGTTCTCTGTGCTTATCTCGAAATTAATCCCATAA
JMSF036N02+           TCTGCCGTGCATCTAAGCATGCCAATGTTCTCTGTGCTTATCTCGAAATTAATCCCATAA
JMFF016J15+                                                  ATCTCGAAATTAATCCCATAA
                      ____________________________________________________________
consensus             TCTGCCGTGCATCTAAGCATGCCAATGTTCTCTGTGCTTATCTCGAAATTAATCCCATAA
 
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JMSF019A23+           CAAAATTTCGCAGCGAGCTCAAACGCCTCTGCTCCACCGGGGATATCAGGGATTTCAACT
JMSF028B23+           CAAAATTTCGCAGCGAGCTCAAACGCCTCTGCTCCACCGGGGATATCAGGGATTTCAACT
JMSF032C23+           CAAAATTTCGCAGCGAGCTCAAACGCCTCTGCTCCACCGGGGATATCAGGGATTTCAACT
JMSF036N02+           CAAAATTTCGCAGCGAGCTCAAACGCCTCTGCTCCACCGGGGATATCAGGGATTTCAACT
JMFF016J15+           CAAAATTTCGCAGCGAGCTCAAACGCCTNTGCTCCACCGGGGATATCAGGGATTTCAACT
                      ____________________________________________________________
consensus             CAAAATTTCGCAGCGAGCTCAAACGCCTCTGCTCCACCGGGGATATCAGGGATTTCAACT
 
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JMSF019A23+           ATAGAAAGATCAGC                                              
JMSF028B23+           ATAGAAAGATCAGCATCACTCGACTCAGACACCAATTTCCTTATGTACCCACACTTTGAC
JMSF032C23+           ATAGAAAGATCAGCATCACTCGACTCAGACACCAATTTCCTTATGTACCCACACTTTGAC
JMSF036N02+           ATAGAAAGATCAGCATCACTCGACTCAGACACCAATTTCCTTATGTACCCACACTTTGAC
JMFF016J15+           ATAGAAAGATCAGCATCACTCGACTCAGACACCAATTCCCTTATGTACCCACACTTTGAC
                      ____________________________________________________________
consensus             ATAGAAAGATCAGCATCACTCGACTCAGACACCAATTTCCTTATGTACCCACACTTTGAC
 
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JMSF028B23+           ACTAAAGGGAACTTGTGGAGTGAAAAGGATGTCCCTCCAGCATGAATCGTAACGTCGCTA
JMSF032C23+           ACTAAAGGGAACTTGTGGAGTGAAAAGGATGTCCCTCCAGCATGAATCGTAACGTCGCTA
JMSF036N02+           ACTAAAGGGAACTTGTGGAGTGAAAAGGATGTCCCTCCAGCATGAATCGTAACGTCGCTA
JMFF016J15+           ACTAAAGGGAACTTGTGGAGTGAAAAGGATGTCCCTCCAGCATGAATCGTAACGTCGCTA
                      ____________________________________________________________
consensus             ACTAAAGGGAACTTGTGGAGTGAAAAGGATGTCCCTCCAGCATGAATCGTAACGTCGCTA
 
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JMSF028B23+           GGGATTTCCTGGGAAAAGATCCATTCAGTGGTCCTCTTCATGGCAGTGGAAAGAAGCTCC
JMSF032C23+           GGGATT-------------TCCATTCAGTGGTCCTCTTCATGGCAGTGGAAAGAAGCTCC
JMSF036N02+           GGGATTTCCTGGGAAAAGATCCATTCAGTGGTCCTCTTCATGGCAGTGGAAAGAAGCTCC
JMFF016J15+           GGGATTTCCTGGGAAAAGATCCATTCAGTGGTCCTCTTCATGGCAGTGGAAAGAAGCTCC
                      ____________________________________________________________
consensus             GGGATTTCCTGGGAAAAGATCCATTCAGTGGTCCTCTTCATGGCAGTGGAAAGAAGCTCC
 
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JMSF028B23+           TTCTTTTTGATAGACAGGTTATTAACAATACCCTCTTGATCAAGATCCACCATGGCAATG
JMSF032C23+           TTCTTTTTGATAGACAGGTTATTAACAATACCCTCTTGATCAAGATCCACCATGGCAATG
JMSF036N02+           TTCTTTTTGATAGACAGGTTATTAACAATACCCTCTTGATCAAGATCCACCATGGCAATG
JMFF016J15+           TTCTTTTTGATAGACAGGTTATTAACAATACCCTCTTGATCAAGATCCACCATGGCAATG
                      ____________________________________________________________
consensus             TTCTTTTTGATAGACAGGTTATTAACAATACCCTCTTGATCAAGATCCACCATGGCAATG
 
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JMSF028B23+           ATCAGAGAACTCTGAGCCCAGAAATGTGCTCATCAACACTGAAGATGATGATGAGTTAAA
JMSF032C23+           ATCAGAGAACTCTGAGCCCAGAAATGTGCTCATCAACACTGAAGATGATGATGAGTTAAA
JMSF036N02+           ATCAGAGAACTCTGAGCCCAGAAATGTGCTCATCAACACTGAAGATGATGATGAGTTAAA
JMFF016J15+           ATCAGAGAACTNTGAGCCCAGAAATGTGCTCATCAACACTGAAGATGATGATGAGTTAAA
                      ____________________________________________________________
consensus             ATCAGAGAACTCTGAGCCCAGAAATGTGCTCATCAACACTGAAGATGATGATGAGTTAAA
 
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JMSF028B23+           TAAGCAACTTCCAACTTTTTTAAAGCAAAAAATTTCCCTCTAGCTATTCTTGTGCATCAA
JMSF032C23+           TAAGCAACTTCCAACTTTTTTAAAGCAAAAAATTTCCCTCTAGCTATTCTTGTGCATCAA
JMSF036N02+           TAAGCAACTTCCAACTTTTTTAAAGCAAAAAATTTCCCTCTAGCTATTCTTGTGCATCAA
JMFF016J15+           TAAGCAACTTCCAACTTTTTTAAAGCAAAAAATTTCCCTCTAGCTATTCTTGTGCATCAA
JMSF030P03+                                                             TGTGCATCAA
                      ____________________________________________________________
consensus             TAAGCAACTTCCAACTTTTTTAAAGCAAAAAATTTCCCTCTAGCTATTCTTGTGCATCAA
 
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JMSF028B23+           AAGCAAAGCTACTATCTTGTCCCCAAACAATTAGT                         
JMSF032C23+           AGGCAAAGCTACTATCTTGTCCCCAAACAATTAGT                         
JMSF036N02+           AAGCAAAGCTACTATCTTGTCCCCAAACAATTAGTACCCACTTTTTTTTTCCACAGTCTT
JMFF016J15+           AAGCAAAGCTACTATCTTGTCCCCAAACAATTAGTACCCACTTTTTTTTTCCACAGTCTT
JMSF030P03+           AAGCAAAGCTACTATCTTGTCCCCAAACAATTAGTACCCACTTTTTTTTTCCACAGTCTT
                      ____________________________________________________________
consensus             AAGCAAAGCTACTATCTTGTCCCCAAACAATTAGTACCCACTTTTTTTTTCCACAGTCTT
 
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JMSF036N02+           CCTCTTCTTT                                                  
JMFF016J15+           CCTCTTCTTTGTCTCAATAATGCACAACCCTACCTATCTTCAAT                
JMSF030P03+           CCTCTTCTTTGTCTCAATAATGCACAACCCTACCTATCTTCAATATCTGATCAGCCAATA
                      ____________________________________________________________
consensus             CCTCTTCTTTGTCTCAATAATGCACAACCCTACCTATCTTCAATATCTGATCAGCCAATA
 
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JMSF030P03+           ACTGCATTATTATCATCAACCTTTGCAATCAATCACCACCCTAGTGAAATTCCCATAATA
                      ____________________________________________________________
consensus             ACTGCATTATTATCATCAACCTTTGCAATCAATCACCACCCTAGTGAAATTCCCATAATA
 
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JMSF030P03+           GGCATTGCACAAAGAATCTATTATCTACACACACATGTAGAACCTGAATGTCAGATGGCA
                      ____________________________________________________________
consensus             GGCATTGCACAAAGAATCTATTATCTACACACACATGTAGAACCTGAATGTCAGATGGCA
 
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JMSF030P03+           GAAGAGGAAGGGTATAAATGTATAATGAGTAATATGCAGAAAAATTAGGGTTAACTGGCT
                      ____________________________________________________________
consensus             GAAGAGGAAGGGTATAAATGTATAATGAGTAATATGCAGAAAAATTAGGGTTAACTGGCT
 
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JMSF030P03+           TGAAACAGATGTATAAGTGTGTGGTTGTAAATGCAGGAGGTTTTGTATAAAGGGATGAGA
                      ____________________________________________________________
consensus             TGAAACAGATGTATAAGTGTGTGGTTGTAAATGCAGGAGGTTTTGTATAAAGGGATGAGA
 
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JMSF030P03+           TGATGAAGGCGCCAAAAAAGTGGAAGTTTCCCTGTGCATTTTCGTCCACAAAAACACCAA
                      ____________________________________________________________
consensus             TGATGAAGGCGCCAAAAAAGTGGAAGTTTCCCTGTGCATTTTCGTCCACAAAAACACCAA
 
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JMSF030P03+           TCTTGATTGATTTCTCCTAAAGATTACCATTCTCAAGAGTAAATCTGATACCTAAACTAA
                      ____________________________________________________________
consensus             TCTTGATTGATTTCTCCTAAAGATTACCATTCTCAAGAGTAAATCTGATACCTAAACTAA
 
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JMSF030P03+           CAGAGATTCAGAGACAAAAATATACGATGTATCTGTCTGGATTTGGGCGCTGGGCCCATC
                      ____________________________________________________________
consensus             CAGAGATTCAGAGACAAAAATATACGATGTATCTGTCTGGATTTGGGCGCTGGGCCCATC
 
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JMSF030P03+           CCATCTGGTTGATCAATAATGCAACGTTCAAGTGGTTCAACCACTGCTGAAGAGCCCGCC
                      ____________________________________________________________
consensus             CCATCTGGTTGATCAATAATGCAACGTTCAAGTGGTTCAACCACTGCTGAAGAGCCCGCC