Contig 013421:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011L23Sequence505013421 (8)ref|XP_009609458.1|3e-54PREDICTED: microtubule-associated protein 70-3-like [Nicotiana tomentosiformis]738005728 (4)ref|XP_009610620.1|2e-15PREDICTED: microtubule-associated protein 70-2-like [Nicotiana tomentosiformis]
JMFS042F11Sequence636013421 (8)ref|XP_009776285.1|9e-72PREDICTED: microtubule-associated protein 70-2-like [Nicotiana sylvestris]
JMFS061F12Sequence602013421 (8)ref|XP_009609458.1|1e-54PREDICTED: microtubule-associated protein 70-3-like [Nicotiana tomentosiformis]
JMFS086G02Sequence591013421 (8)ref|XP_009776285.1|2e-62PREDICTED: microtubule-associated protein 70-2-like [Nicotiana sylvestris]
JMFS102B08Sequence619013421 (8)ref|XP_009776285.1|2e-54PREDICTED: microtubule-associated protein 70-2-like [Nicotiana sylvestris]
JMFS129G10Sequence612013421 (8)ref|XP_009776285.1|4e-63PREDICTED: microtubule-associated protein 70-2-like [Nicotiana sylvestris]
JMSF030O18Sequence549013421 (8)ref|XP_009609458.1|3e-24PREDICTED: microtubule-associated protein 70-3-like [Nicotiana tomentosiformis]768005728 (4)ref|XP_009768285.1|1e-10PREDICTED: microtubule-associated protein 70-2-like [Nicotiana sylvestris]
JMSF033L15Sequence176013421 (8)760005728 (4)ref|XP_009610620.1|6e-25PREDICTED: microtubule-associated protein 70-2-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFS042F11+                                ATCATCATCCTTTTGAGCAGCATGAACCCTCCTAAGAGT
JMFS129G10+                                                                 AAGAGT
                      ____________________________________________________________
consensus                                  ATCATCATCCTTTTGAGCAGCATGAACCCTCCTAAGAGT
 
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JMFS042F11+           GGCTTCTGCTGCAAACTGTGCTGCCATAGAGGCCTTCTTCTCATCATTTATTTTCTTAAT
JMFS086G02+                  GCTGCAAACTGTGCTGCCATAGAGGCTTTCTTCTCATCATTTATTTTCTTAAT
JMFS129G10+           GGCTTCTGCTGCAAACTGTGCTGCCATAGAGGCCTTCTTCTCATCATTTATTTTCTTAAT
JMFS061F12+                               CTGCCATAGAGGCCTTCTTCTCATCATTTATTTTCTTAAT
                      ____________________________________________________________
consensus             GGCTTCTGCTGCAAACTGTGCTGCCATAGAGGCCTTCTTCTCATCATTTATTTTCTTAAT
 
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JMFS042F11+           TTCAAGATTTTTGCTTTCTAGAAGAGACTCTGCCAACTTCAGCTTCTCCTCAACCCTTGC
JMFS086G02+           TTCAAGATTTGTGCTTTCTAGAAGAGACTCTGCCAACTTCAGCTTCTCCTCAACCCTTGC
JMFF011L23+             CAAGATTTTTGCTTTNTAGAAGAGACTNTGCCAACTTCAGCTTCTCCTCAACCCTTGC
JMFS129G10+           TTCAAGATTTTTGCTTTCTAGAAGAGACTCTGCCAACTTCAGCTTCTCCTCAACCCTTGC
JMFS061F12+           TTCAAGATTTNTGCTTTCTAGAAGAGACTCTGCCAACTTCAGCTTCTCCTCAACCCTTGC
JMFS102B08+                                         TGCCAACTTCAGCTTCTCCTCAACCCTTGC
                      ____________________________________________________________
consensus             TTCAAGATTTTTGCTTTCTAGAAGAGACTCTGCCAACTTCAGCTTCTCCTCAACCCTTGC
 
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JMFS042F11+           CAACTCATCATTGAGCTCTTCAACAGCCTTTTCTCGCAAGCGCTCAGAAAACCTCAACGC
JMFS086G02+           CAACTCATCATTGAGCTCTTCAACAGCCTTTTCTCGCAAGCGCTCAGAAAACCTCAACGC
JMFF011L23+           CAACTCATCATTGAGCTCTTCAACAGCCTTTTCTNGCAAGCGCTCAGAAAACCTCAACGC
JMFS129G10+           CAACTCATCATTGAGCTCTTCAACAGCCTTTTCTCGCAAGCGCTCAGAAAACCTCAACGC
JMFS061F12+           CAACTCATCATTGAGCTCTTCAACAGCCTTTTCTCGCAAGCGCTCAGAAAACCTCAACGC
JMFS102B08+           CAACTCATCATTGAGCTCTTCAACAGCCTTTCNTCGCAAGCGCTCAGAAAACCTCAACGC
                      ____________________________________________________________
consensus             CAACTCATCATTGAGCTCTTCAACAGCCTTTTCTCGCAAGCGCTCAGAAAACCTCAACGC
 
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JMFS042F11+           CTTGATCTCCGCTTGAGCCTCAGACAACTCCCGGTCCTTGTCTCTGACTTCGTTCTCGAG
JMFS086G02+           CTTGATCTCCGCTTGAGCCTCAGACAACTCCCGGTCCTTGTCTCTGACTTCGTTCTCGAG
JMFF011L23+           CTTGATCTCCGCTTGAGCCTCAGACAACTCCCGGTCCTTGTCTCTGACTTCGTTCTCGAG
JMFS129G10+           CTTGATCTCCGCTTGAGCCTCAGACAACTCCCGGTCCTTGTCTCTGACTTCGTTCTCGAG
JMFS061F12+           CTTGATCTCCGCTTGAGCCTCAGACAACTCCCGGTCCTTGTCTCTGACTTCGTTCTCGAG
JMFS102B08+           CTTGATCTCCGCTTGAGCCTCAGACAACTCCCGGTCCTTGTCTCTGACTTCGTTCTCGAG
JMSF030O18+                                                                    GAG
                      ____________________________________________________________
consensus             CTTGATCTCCGCTTGAGCCTCAGACAACTCCCGGTCCTTGTCTCTGACTTCGTTCTCGAG
 
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JMFS042F11+           TCGATTGAGCTCCATTTTCACCGGATCCGAGCCGTGCAGCAGATTTATGAACTCGTCCGC
JMFS086G02+           TCGATTGAGCTCCATTTTCACCGGATCCGAGCCGTGCAGCAGATTTATGAACTCGTCCGC
JMFF011L23+           TCGATTGAGCTCCATTTTCACCGGATCCGAGCCGTGCAGCAGATTTATGAACTCGTCCGC
JMFS129G10+           TCGATTGAGCTCCATTTTCACCGGATCCGAGCCGTGCAGCAGATTTATGAACTCGTCCGC
JMFS061F12+           TCGATTGAGCTCCATTTTCACCGGATCCGAGCCGTGCAGCAGATTTACGAACTCGTCCGC
JMFS102B08+           TCGATTGAGCTCCATTTTCACCGGATCCGAGCCGTGCAGCAGATTTATGAACTCGTCCGC
JMSF030O18+           TNGATTGAGNTCCATTTTCNCNGGATNCGAGCCGTGCAGCAGATTTATGAANTNGTCCGN
                      ____________________________________________________________
consensus             TCGATTGAGCTCCATTTTCACCGGATCCGAGCCGTGCAGCAGATTTATGAACTCGTCCGC
 
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JMFS042F11+           GTCCAGACTCGGCCTCACCGACGCTCTCCTCCTCGCCGTCTTCCCTTCCTTGAACGACGC
JMFS086G02+           GTCCAGACTCGGCCTCACCGACGCTCTCCTCCTCGCCGTCTTCCCTTCCTTGAACGACGC
JMFF011L23+           GTCCAGACTCGGCCTCACCGACGCTCTCCTCCTCGCCGTCTTCCCTTCCTTGAACGACGC
JMFS129G10+           GTCCAGACTCGGCCTCACCGACGCTCTCCTCCTCGCCGTCTTCCCTTCCTTGAACGACGC
JMFS061F12+           GTCCAGACTCGGCCTCACCGACGCTCTCCTCCTCGCCGTCTTCCCTTCCTTGAACGACGC
JMFS102B08+           GTCCAGACTCGGCCTCACCGACGCTCTCCTCCTCGCCGTCTTCCCTTCCTTGAACGACGC
JMSF030O18+           GTCCAGACTNGGCCTCACNGACGCTNTCCTCCTNGCCGTNTTCCCTTCCTTGAANGACGC
                      ____________________________________________________________
consensus             GTCCAGACTCGGCCTCACCGACGCTCTCCTCCTCGCCGTCTTCCCTTCCTTGAACGACGC
 
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JMFS042F11+           CGACACCGTCAGCTGCGGCGGCGTAGCCTCCGCCGTGGCAGGCCGCACATTGCCGCCATT
JMFS086G02+           CGACACCGTCAGCTGCGGCGGCGTAGCCTCCGCCGTGGCAGGCCGCACATTGCCGCCATT
JMFF011L23+           CGACACCGTCAGCTGCGGCGGCGTAGCCTCCGCCGTGGCAGGCCGCACATTGCCGCCATT
JMFS129G10+           CGACACCGTCAGCTGCGGCGGCGTAGCCTCCGCCGTGGCAGGCCGCACATTGCCGCCATT
JMFS061F12+           CGACACCGTCAGCTGCGGCGGCGTAGCCTCCGCCGTGGCAGGCCGCACATTGCCGCCATT
JMFS102B08+           CGACACCGTCAGCTGCGGCGGCGTAGCCTCCGCCGTGGCAGGCCGCACATTGCCGCCATT
JMSF030O18+           CGACACCGTCAGNTGCGGCGGNGTAGCNTCCGCCGTGGCAGGCCGCACATTGCCGCCATT
                      ____________________________________________________________
consensus             CGACACCGTCAGCTGCGGCGGCGTAGCCTCCGCCGTGGCAGGCCGCACATTGCCGCCATT
 
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JMFS042F11+           CTCGCCGGAGCTCACTTCCGTCGCACTCCTCTCGCCGGAAACCTCCGCCATCTCCGATCT
JMFS086G02+           CTCGCCGGAGCTCACTTCCGTCGCACTCCTCTCGCCGGAAACCTCCGCCATCTCCGATCT
JMFF011L23+           CTCGCCGGAGCTCACTTCCGTCGCACTCCTCTCGCCGGAAACCTCCGCCATCTCCGATCT
JMFS129G10+           CTCGCCGGAGCTCACTTCCGTCGCACTCCTCTCGCCGGAAACCTCCGCCATCTCCGATCT
JMFS061F12+           CTCGCCGGAGCTCACTTCCGTCGCACTCCTCTCGCCGGAAACCTCCGCCATCTCCGATCT
JMFS102B08+           CTCGCCGGAGCTCACTTCCGTCGCACTCCTCTCGCCGGAAACCTCCGCCATCTCCGATCT
JMSF030O18+           CTCGCCGGAGCTCACTTCCGTCGCACTCCTCTCGCCGGAAACCTCCGCCATCTCCGATCT
                      ____________________________________________________________
consensus             CTCGCCGGAGCTCACTTCCGTCGCACTCCTCTCGCCGGAAACCTCCGCCATCTCCGATCT
 
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JMFS042F11+           ACTCCCTTATCTCCTCCCTCGCATCAAATCCCTCCTCCTCCCCCCCAACGCAATACTCAA
JMFS086G02+           ACTCCCTTATCTCCTCCCTCGCATCAAATCCCTCCTCCTCCCCCCCAACGCAATACTCAA
JMFF011L23+           ACTCCCTTATCTCCTCCCTCGCATCAAATCCCTCCTCCTCCCCCCCAACGCAATACTCAA
JMFS129G10+           ACTCCCTTATCTCCTCCCTCGCATCAAATCCCTCCTCCTCCCCCCCAACGCAATACTCAA
JMFS061F12+           ACTCCCTTATCTCCTCCCTCGCATCAAATCCCTCCTCCTCCCCCCCAACGCAATACTCAA
JMSF033L15+                 TTATCTCCTCCCTCGCATCAAATCCCTCCTCCTCCCCCCCAACGCAATACTCAA
JMFS102B08+           ACTCCCTTATCTCCTCCCTCGCATCAAATCCCTCCTCCTCCCCCCCAACGCAATACTCAA
JMSF030O18+           ACTCCCTTATCTCCTCCCTCGCATCAAATCCCTCCTCCTCCCCCCCAACGCAATACTCAA
                      ____________________________________________________________
consensus             ACTCCCTTATCTCCTCCCTCGCATCAAATCCCTCCTCCTCCCCCCCAACGCAATACTCAA
 
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JMFS042F11+           AAACACAAAACACCAAACAGTGATTACAAAATACGGGAGACAGCCAGACAGACACAG   
JMFS086G02+           AAACACAAAACACCAAACAGTGATTACAAAATACGGGAGACAGCCAGACAGACACAGA  
JMFF011L23+           AAACACAAAACACCAAACAGTGATTAC                                 
JMFS129G10+           AAACACAAAACACCAAACAGTGATTACAAAATACGGGAGACAGCCAGACAGACACAGAGA
JMFS061F12+           AAACACAAAACACCAAACAGTGATTACAAAATACGGGAGACAGCCAGACAGACACAGAGA
JMSF033L15+           AAACACAAAACACCAAACAGTGATTACAAAATACGGGAGACAGCCAGACAGACACAGAGA
JMFS102B08+           AAACACAAAACACCAAACAGTGATTACAAAATACGGGAGACAGCCAGACAGACACAGAGA
JMSF030O18+           AAACACAAAACACCAAACAGTGATTACAAAATACGGGAGACAGCCAGACAGACACAGAGA
                      ____________________________________________________________
consensus             AAACACAAAACACCAAACAGTGATTACAAAATACGGGAGACAGCCAGACAGACACAGAGA
 
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JMFS129G10+           GATAGA                                                      
JMFS061F12+           GATAGACAGAGAGAGAAAGAGA                                      
JMSF033L15+           GATAGACAGAGAGAGAAAGAGAAATAGAAATAGAAAGAGAGAGAGAGAGATCAAAGTGT 
JMFS102B08+           GATAGACAGAGAGAGAAAGAGAAATAGAAATAGAAAGAGAGAGAGAGAGATCAAAGTGTG
JMSF030O18+           GATAGACAGAGAGAGAAAGAGAAATAGAAATAGAAAGAGAGAGAGAGAGATCAAAGTGTG
                      ____________________________________________________________
consensus             GATAGACAGAGAGAGAAAGAGAAATAGAAATAGAAAGAGAGAGAGAGAGATCAAAGTGTG
 
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JMFS102B08+           TGAAGTGTAGATGTATTATAGAGAGACAAATAGTGTGTGGAGTTCAAAA           
JMSF030O18+           TGAAGTGTAGATGTATTATAGAGAGACAAATAGTGTGTGGAGTTCAAAATGCTGTGCTCG
                      ____________________________________________________________
consensus             TGAAGTGTAGATGTATTATAGAGAGACAAATAGTGTGTGGAGTTCAAAATGCTGTGCTCG