Contig 013416:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF030A14-                                   AGGCACAGATCCACAATATGAAGACATACCACAAT
                      ____________________________________________________________
consensus                                      AGGCACAGATCCACAATATGAAGACATACCACAAT
 
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rJMSF030A14-          GTACTAACATAATACTTGCTAGAAAGACTGGTAGAAACCCAATATGGTCACCCCGTGTAA
                      ____________________________________________________________
consensus             GTACTAACATAATACTTGCTAGAAAGACTGGTAGAAACCCAATATGGTCACCCCGTGTAA
 
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rJMSF030A14-          CAACTAGTTTATCCACTCTTCAAGAACATGTAACCATTTCTCCCCCCTCCCAAAAAACAG
                      ____________________________________________________________
consensus             CAACTAGTTTATCCACTCTTCAAGAACATGTAACCATTTCTCCCCCCTCCCAAAAAACAG
 
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rJMSF030A14-          TAAAATGTAAAAAATTATAAGATATACAATCAAAATAAACCAGATATTAGAAGAATGGGT
                      ____________________________________________________________
consensus             TAAAATGTAAAAAATTATAAGATATACAATCAAAATAAACCAGATATTAGAAGAATGGGT
 
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rJMSF030A14-          ATCATCAGAATCTCACAGAACCTGCCGAACAAAAGAAGACGAATCATACAATCCCCTCAG
                      ____________________________________________________________
consensus             ATCATCAGAATCTCACAGAACCTGCCGAACAAAAGAAGACGAATCATACAATCCCCTCAG
 
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rJMSF030A14-          GAACTACAGCACATAGACTTCTTTTGTGGGATGACTTGCCCAGGACCAGGCACAAGAATC
                      ____________________________________________________________
consensus             GAACTACAGCACATAGACTTCTTTTGTGGGATGACTTGCCCAGGACCAGGCACAAGAATC
 
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rJMSF030A14-          TTCTTCCCGGTTAAAGATGCAGCGGCATTCCCATTCCCTTGATTCTCAGCAGCCGCCAGA
                      ____________________________________________________________
consensus             TTCTTCCCGGTTAAAGATGCAGCGGCATTCCCATTCCCTTGATTCTCAGCAGCCGCCAGA
 
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rJMSF030A14-          TTCTTCCTGTTCACAATGTTGAAGATCTCTGTTAGCACCGTGGTAAACGCTTCCTCCACG
                      ____________________________________________________________
consensus             TTCTTCCTGTTCACAATGTTGAAGATCTCTGTTAGCACCGTGGTAAACGCTTCCTCCACG
 
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rJMSF030A14-          TTTTTAGCTTCCATGGCAGACGTCTCCAAGAAGAACAACCCTTCCTTCTGAGCAAACTCT
JMSF030A14+              TTAGCTTCCATGGCAGACGTCTCCAAGAAGAACAACCCTTCCTTCTGAGCAAACTCT
                      ____________________________________________________________
consensus             TTTTTAGCTTCCATGGCAGACGTCTCCAAGAAGAACAACCCTTCCTTCTGAGCAAACTCT
 
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rJMSF030A14-          TTAGCATCCTCAGTTGGAACATCCCGCCGGTCTTCCAGATCAGTTTTGTTCCCAATTAGC
JMFF001G22+                                            TCCAGATCAGTTTTGTTCCCAATTAGC
JMSF030A14+           TTAGCATCCTCAGTTGGAACATCCCGCCGGTCTTCCAGATCAGTTTTGTTCCCAATTAGC
                      ____________________________________________________________
consensus             TTAGCATCCTCAGTTGGAACATCCCGCCGGTCTTCCAGATCAGTTTTGTTCCCAATTAGC
 
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rJMSF030A14-          ATTATCACTATGTTCTTATCAGCATGAGCACGCAGCTCTTCCAACCAACGAGGTATGTGA
JMFF001G22+           ATTATCACTATGTTCTTATCAGCATGAGCACGCAGCTCTTCCAACCAACGAGGTATGTGA
JMSF030A14+           ATTATCACTATGTTCTTATCAGCATGAGCACGCAGCTCTTCCAACCAACGAGGTATGTGA
                      ____________________________________________________________
consensus             ATTATCACTATGTTCTTATCAGCATGAGCACGCAGCTCTTCCAACCAACGAGGTATGTGA
 
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rJMSF030A14-          TCAAAGGTTTGGCGTTTCGTTATATCGTACACTAACATCGCACCCACAGCTCCCCTGTAG
JMFF001G22+           TCAAAGGTTTGGCGTTTCGTTATATCGTACACTAACATCGCACCCACAGCTCCCCTGTAG
JMSF030A14+           TCAAAGGTTTGGCGTTTCGTTATATCGTACACTAACATCGCACCCACAGCTCCCCTGTAG
                      ____________________________________________________________
consensus             TCAAAGGTTTGGCGTTTCGTTATATCGTACACTAACATCGCACCCACAGCTCCCCTGTAG
 
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rJMSF030A14-          TAGGCACTCGTAACAGCTCTATATCGTTCTTGGCCGG                       
JMFF001G22+           TAGGCACTCGTAACAGCTCTATATCGTTCTTGGCCGGCGGTGTCCCAGATCTGAGCTTTG
JMSF030A14+           TAGGCACTCGTAACAGCTCTATATCGTTCTTGGCCGGCGGTGTCCCAGATCTGAGCTTTG
                      ____________________________________________________________
consensus             TAGGCACTCGTAACAGCTCTATATCGTTCTTGGCCGGCGGTGTCCCAGATCTGAGCTTTG
 
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JMFF001G22+           ACGGATTTGTGTTGGATGAGCATAGTCCGGGTTTGGAACTCCACCCCAATGGTAGCCTTT
JMSF030A14+           ACGGATTTGTGTTGGATGAGCATAGTCCGGGTTTGGAACTCCACCCCAATGGTAGCCTTT
                      ____________________________________________________________
consensus             ACGGATTTGTGTTGGATGAGCATAGTCCGGGTTTGGAACTCCACCCCAATGGTAGCCTTT
 
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JMFF001G22+           GAATCGAGGCTGAACTCGTTCCGGGCAAACCGAGCCAGTATCTGAGACTTCCCCACCGCC
JMSF030A14+           GAATCGAGGCTGAACTCGTTCCGGGCAAACCGAGCCAGTATCTGAGACTTCCCCACCGCC
                      ____________________________________________________________
consensus             GAATCGAGGCTGAACTCGTTCCGGGCAAACCGAGCCAGTATCTGAGACTTCCCCACCGCC
 
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JMFF001G22+           GAGTCTCCGATCAGCACCACCTTGAACACATAATCTATCTTCTGCCCCGCCGCATCACCA
JMSF030A14+           GAGTCTCCGATCAGCACCACCTTGAACACATAATCTATCTTCTGCCCCGCCGCATCACCA
                      ____________________________________________________________
consensus             GAGTCTCCGATCAGCACCACCTTGAACACATAATCTATCTTCTGCCCCGCCGCATCACCA
 
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JMFF001G22+           TATCCTCCGCCACTCGCCATTCTTCTTTCTCTCTCTCTCTATATCTCTCTTCTCTTCCTC
JMSF030A14+           TATCCTCCGCCACTCGCCATTCTTCTTTCTCTCTCTCTCTATATCTCTCTTCTCTTCCTC
                      ____________________________________________________________
consensus             TATCCTCCGCCACTCGCCATTCTTCTTTCTCTCTCTCTCTATATCTCTCTTCTCTTCCTC
 
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JMFF001G22+           TATATATCTCTCCCCTTTTGTAGAAGCGTAGATTAAGAGTAGCAGTAGCAGCGTAGGCGT
JMSF030A14+           TATATATCTCTCCCCTTTTGTAGAAGCGTAGATTAAGAGTAGCAGTAGCAGCGTAGGCGT
                      ____________________________________________________________
consensus             TATATATCTCTCCCCTTTTGTAGAAGCGTAGATTAAGAGTAGCAGTAGCAGCGTAGGCGT
 
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JMFF001G22+           AGCTGAGGAGAGAAGAGTTGAAGAAACAGAGAAAGCCGTAGACGGTAGATCTTGACGAT 
JMSF030A14+           AGCTGAGGAGAGAAGAGTTGAAGAAACAGAGAAAGCCGTAGACGGTAGATCTTGACGATG
                      ____________________________________________________________
consensus             AGCTGAGGAGAGAAGAGTTGAAGAAACAGAGAAAGCCGTAGACGGTAGATCTTGACGATG