Contig 013414:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF029P01Sequence580013414 (4)ref|XP_009619493.1|141PREDICTED: uncharacterized protein LOC104111488 [Nicotiana tomentosiformis]741013414 (4)ref|XP_009619493.1|198PREDICTED: uncharacterized protein LOC104111488 [Nicotiana tomentosiformis]
JMSF046E20Sequence704013414 (4)ref|XP_009619493.1|224PREDICTED: uncharacterized protein LOC104111488 [Nicotiana tomentosiformis]654013414 (4)ref|XP_009619493.1|224PREDICTED: uncharacterized protein LOC104111488 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF029P01- AAATATTT
                      ____________________________________________________________
consensus AAATATTT
 
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rJMSF029P01- GCCATTTTCACCATTCTTGGTGAATCAACTGGGGGGAAGGATCAAGATTGGATTACAAGA
                      ____________________________________________________________
consensus GCCATTTTCACCATTCTTGGTGAATCAACTGGGGGGAAGGATCAAGATTGGATTACAAGA
 
. : . : . : . : . : . :
rJMSF029P01- CCTGAGAGTATTACTAGTAATACATAATCCACAAACACTAGACTCATTTGCATTAATATA
JMSF046E20+ TAATCCACAAACACTAGACTCATTTGCATTAATATA
                      ____________________________________________________________
consensus CCTGAGAGTATTACTAGTAATACATAATCCACAAACACTAGACTCATTTGCATTAATATA
 
. : . : . : . : . : . :
rJMSF029P01- AAGTCAAAACAGTGTTAGTGTTCACATACACTAAAAGCTTTGTGATTATTAGTAACAATG
JMSF046E20+ AAGTCAAAACAGTGTTAGTGTTCACATACACTAAAAGCTTTGTGATTATTAGTAACAATG
rJMSF046E20- GTTAGTGTTCACATACACTAAAAGCTTTGTGATTATTAGTAACAATG
                      ____________________________________________________________
consensus AAGTCAAAACAGTGTTAGTGTTCACATACACTAAAAGCTTTGTGATTATTAGTAACAATG
 
. : . : . : . : . : . :
rJMSF029P01- TGATCTCTGATTGCAAAATTGTGATGAGAGTATTTTGCAAAAACTAAATCAGAACTTCTT
JMSF046E20+ TGATCTCTGATTGCAAAATTGTGATGAGAGTATTTTGCAAAAACTAAATCAGAACTTCTT
rJMSF046E20- TGATCTCTGATTGCAAAATTGTGATGAGAGTATTTTGCAAAAACTAAATCAGAACTTCTT
                      ____________________________________________________________
consensus TGATCTCTGATTGCAAAATTGTGATGAGAGTATTTTGCAAAAACTAAATCAGAACTTCTT
 
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rJMSF029P01- CTGCTCTTTGGTGTCCTCAGGAGGCAGTGACACAAACTGGACGATGCTTTGGACTTGAGA
JMSF046E20+ CTGCTCTTTGGTGTCCTCAGGAGGCAGTGACACAAACTGGACGATGCTTTGGACTTGAGA
rJMSF046E20- CTGCTCTTTGGTGTCCTCAGGAGGCAGTGACACAAACTGGACGATGCTTTGGACTTGAGA
                      ____________________________________________________________
consensus CTGCTCTTTGGTGTCCTCAGGAGGCAGTGACACAAACTGGACGATGCTTTGGACTTGAGA
 
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rJMSF029P01- AACGTCGATTCGGAACTTGTTAGCTATTTGGTTGACATCCATAGGCCCTTCATGCTCATC
JMSF046E20+ AACGTCGATTCGGAACTTGTTAGCTATTTGGTTGACATCCATAGGCCCTTCATGCTCATC
rJMSF046E20- AACGTCGATTCGGAACTTGTTAGCTATTTGGTTGACATCCATAGGCCCTTCATGCTCATC
                      ____________________________________________________________
consensus AACGTCGATTCGGAACTTGTTAGCTATTTGGTTGACATCCATAGGCCCTTCATGCTCATC
 
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rJMSF029P01- TGATTTGCCTTGATACAACACTATGATTTGTCGTAACTGCGCTACGTTTAAGGTTCCTGG
JMSF046E20+ TGATTTGCCTTGATACAACACTATGATTTGTCGTAACTGCGCTACGTTTAAGGTTCCTGG
rJMSF046E20- TGATTTGCCTTGATACAACACTATGATTTGTCGTAACTGCGCTACGTTTAAGGTTCCTGG
                      ____________________________________________________________
consensus TGATTTGCCTTGATACAACACTATGATTTGTCGTAACTGCGCTACGTTTAAGGTTCCTGG
 
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rJMSF029P01- AGGCGCCGGCCTTCCCTCGTATCTGCTAGACTCTGTTGTTGTATTCCTTAGCTTTGGTAA
JMSF046E20+ AGGCGCCGGCCTTCCCTCGTATCTGCTAGACTTTGTTGTTGTATTCCTTAGCTTTGGTAA
rJMSF046E20- AGGCGCCGGCCTTCCCTCGTATCTGCTAGACTTTGTTGTTGTATTCCTTAGCTTTGGTAA
JMSF029P01+ ATCTGCTAGACTCTGTTGTTGTATTCCTTAGCTTTGGTAA
                      ____________________________________________________________
consensus AGGCGCCGGCCTTCCCTCGTATCTGCTAGACTTTGTTGTTGTATTCCTTAGCTTTGGTAA
 
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rJMSF029P01- AGGCCTATCATAGTTTTCCACAACCGATCCCTCACCCATTTCAAGTTTCCCTCCAGGCTT
JMSF046E20+ AGGCCTATCATAGTTTTCCACAACCGATCCCTCACCCATTTCAAGTTTCCCTCCAGGCTT
rJMSF046E20- AGGCCTATCATAGTTTTCCACAACCGATCCCTCACCCATTTCAAGTTTCCCTCCAGGCTT
JMSF029P01+ AGGCCTATCATAGTTTTCCACAACCGATCCCTCACCCATTTCAAGTTTCCCTCCAGGCTT
                      ____________________________________________________________
consensus AGGCCTATCATAGTTTTCCACAACCGATCCCTCACCCATTTCAAGTTTCCCTCCAGGCTT
 
. : . : . : . : . : . :
rJMSF029P01- AGCACGGATTCTACCAACCATTTGACTAAGCATCACATCAAACTGTGGATCACGTTCTTC
JMSF046E20+ AGCACGGATTCTACCAACCATTTGACTAAGCATCACATCAAACTGTGGATCACGTTCTTC
rJMSF046E20- AGCACGGATTCTACCAACCATTTGACTAAGCATCACATCAAACTGTGGATCACGTTCTTC
JMSF029P01+ AGCACGGATTCTACCAACCATTTGACTAAGCATCACATCAAACTGTGGATCACGTTCTTC
                      ____________________________________________________________
consensus AGCACGGATTCTACCAACCATTTGACTAAGCATCACATCAAACTGTGGATCACGTTCTTC
 
. : . : . : . : . : . :
rJMSF029P01- AAGGACACTTTTGGGATTAACTTTTGGAGTGCTCTCAGCTCCGGTGCCGACATTTTGGGC
JMSF046E20+ AAGGACACTTTTGGGATTAACTTTTGGAGTGCTCTCAGCTCCGGTGCCGACATTTTGGGC
rJMSF046E20- AAGGACACTTTTGGGATTAACTTTTGGAGTGCTCTCAGCTCCGGTGCCGACATTTTGGGC
JMSF029P01+ AAGGACACTTTTGGGATTAACTTTTGGAGTGCTCTCAGCTCCGGTGCCGACATTTTGGGC
                      ____________________________________________________________
consensus AAGGACACTTTTGGGATTAACTTTTGGAGTGCTCTCAGCTCCGGTGCCGACATTTTGGGC
 
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rJMSF029P01- GGATATAATTTCCGGCGGCGGGGGTGGCGGTCTCTC-ATGGGCTTCTTCAGCTGCGACGA
JMSF046E20+ GGATATAATTTCCGGCGGCGGGGGTGGCGGTCTCTCAATGGGCTTCTTCAGCTGCGACGA
rJMSF046E20- GGATATAATTTCCGGCGGCGGGGGTGGCGGTCTCTCAATGGGCTTCTTCAGCTGCGACGA
JMSF029P01+ GGATATAATTTCCGGCGGCGGGGGTGGCGGTCTCTCAATGGGCTTCTTCAGCTGCGACGA
                      ____________________________________________________________
consensus GGATATAATTTCCGGCGGCGGGGGTGGCGGTCTCTCAATGGGCTTCTTCAGCTGCGACGA
 
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rJMSF029P01- CGAAGTTTCCATTC
JMSF046E20+ CGAAGTTTCCATTCCGGAGCTTCCGATCCTTCCAGCTGCTCGACGAAATGCCTGCCCC
rJMSF046E20- CGAAGTTTCCATTCCGGAGCTTCCGATCCTTCCAGCTGCTCGACGAAATGCCTGCCCC
JMSF029P01+ CGAAGTTTCCATTCCGGAGCTTCCGATCCTTCCAGCTGCTCGACGAAATGCCTGCCCCAT
                      ____________________________________________________________
consensus CGAAGTTTCCATTCCGGAGCTTCCGATCCTTCCAGCTGCTCGACGAAATGCCTGCCCCAT
 
. : . : . : . : . : . :
JMSF029P01+ CTGCTCCCTTTCTCTCTCTGTAATAATCTATATATTCCAATTCGTATGTATGCACTACTA
                      ____________________________________________________________
consensus CTGCTCCCTTTCTCTCTCTGTAATAATCTATATATTCCAATTCGTATGTATGCACTACTA
 
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JMSF029P01+ TAATTATACTCCTAGCCTTGAATCTTAATGTTGCATTTTCTTCAATACCAAACGAAGATG
                      ____________________________________________________________
consensus TAATTATACTCCTAGCCTTGAATCTTAATGTTGCATTTTCTTCAATACCAAACGAAGATG
 
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JMSF029P01+ GATTATTTTCTATTTCTGTGCTTTTTTTCAAAATTGTTTTTGCAGAAAATTAGTTGCGAA
                      ____________________________________________________________
consensus GATTATTTTCTATTTCTGTGCTTTTTTTCAAAATTGTTTTTGCAGAAAATTAGTTGCGAA
 
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JMSF029P01+ AATCTCAAAGTGAAGAAGGTGCTTCAACAAAGAACGACAGATACAATACTTCTCCACGCC
                      ____________________________________________________________
consensus AATCTCAAAGTGAAGAAGGTGCTTCAACAAAGAACGACAGATACAATACTTCTCCACGCC