Contig 013412:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF036N13+                           TCCATGAGTACTAGTATCCGATGCCGTTAGAATNTTACAAAACG
                      ____________________________________________________________
consensus                             TCCATGAGTACTAGTATCCGATGCCGTTAGAATNTTACAAAACG
 
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JMSF036N13+           AGTGAACAATCCGCTTAGGTGGATCAGGGATGCATTCATCAGGACTGGTGGGCTCGGTTT
                      ____________________________________________________________
consensus             AGTGAACAATCCGCTTAGGTGGATCAGGGATGCATTCATCAGGACTGGTGGGCTCGGTTT
 
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JMSF036N13+           GATCCGCCTCTGGGAGTAAAGTGATCTGTGCATAGACTTCATCATTCTCCGCTTCTGCCA
JMSF029N07+                                                                TCTGCCA
                      ____________________________________________________________
consensus             GATCCGCCTCTGGGAGTAAAGTGATCTGTGCATAGACTTCATCATTCTCCGCTTCTGCCA
 
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JMSF036N13+           ATAATTGAAGATTCACAACTCGACAAAGTATCTTCGAAGGAAGACCAAACTGAGGAATCT
JMSF029N07+           ATAATTGAAGANTCACAACTCGACAAAGTATCTTCGAAGGAAGACCAAACTGAGGAATCT
                      ____________________________________________________________
consensus             ATAATTGAAGATTCACAACTCGACAAAGTATCTTCGAAGGAAGACCAAACTGAGGAATCT
 
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JMSF036N13+           GTTGAGTCAAAGCCTGGTTTGTAGACACCTCTAATTGTTCTATGTGACCCTGGGGAAAGT
JMSF029N07+           GTTGAGTCAAAGCCTGGTTTGTAGACACCTCTAATTGTTCTATGTGACCCTGGGGAAAGT
                      ____________________________________________________________
consensus             GTTGAGTCAAAGCCTGGTTTGTAGACACCTCTAATTGTTCTATGTGACCCTGGGGAAAGT
 
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JMSF036N13+           AGTAAGCCCTCTCTCCTTCTTTAGGAACATCTACCAAAGGCCCTGCACATGACTTCCATA
JMSF029N07+           AGTAAGCCCTCTCTCCTTCTTTAGGAACATCTACCAAAGGCCCTGCACATGACTTCCATA
                      ____________________________________________________________
consensus             AGTAAGCCCTCTCTCCTTCTTTAGGAACATCTACCAAAGGCCCTGCACATGACTTCCATA
 
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JMSF036N13+           GCTCTGGTGACAGATCATCACATCCCAAGCCTGAAATTTGTCTCTGCACCCCATGAGAAA
JMSF029N07+           GCTCTGGNGACAGATCATCACATCCCAAGCNTGAAATTTGTCTCTGCACCCCATGAGAAA
                      ____________________________________________________________
consensus             GCTCTGGTGACAGATCATCACATCCCAAGCCTGAAATTTGTCTCTGCACCCCATGAGAAA
 
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JMSF036N13+           CTCCTCCTCTAATACCCACATCCACATGAGCCATTCAAGCTCAGAAAAAAAATACACAAA
JMSF029N07+           CTCCTCCTCTAATACCCACATCCACATGAGCCATTCAAGCTCAGAAAAAAAATACACAAA
                      ____________________________________________________________
consensus             CTCCTCCTCTAATACCCACATCCACATGAGCCATTCAAGCTCAGAAAAAAAATACACAAA
 
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JMSF036N13+           AAGACTCCCACCTTTTTTCAGTTACAAAACCACTCTCGGCTGTGTCTTCTCAGCAACAAA
JMSF029N07+           AAGACTCCCACCTTTTTTCAGTTACAAAACCACTCTCGGNTGTGTNTTNTCAGCAACAAA
                      ____________________________________________________________
consensus             AAGACTCCCACCTTTTTTCAGTTACAAAACCACTCTCGGCTGTGTCTTCTCAGCAACAAA
 
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JMSF036N13+           ACCACTTTCCTGGGGGAAAAAACCGCTTTTTCTTCTTGGCTTTTAATTTCTTCTCTTCGT
JMSF029N07+           ACCACTTTCCTGGGGGAAAAAACCGCTTTTTCTTCTTGGCTTTTAATTTCTTCTCTTCGT
                      ____________________________________________________________
consensus             ACCACTTTCCTGGGGGAAAAAACCGCTTTTTCTTCTTGGCTTTTAATTTCTTCTCTTCGT
 
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JMSF036N13+           GTATGGAGAAGAGCAACAACAACTGAACGCAGTCCACGTTACCGAATCCCAAAACCGCTT
JMSF029N07+           GTATGGAGAAGAGCAACAACAACTGAACGCAGTCCACGTTACCGAATCCCAAAACCGCTT
                      ____________________________________________________________
consensus             GTATGGAGAAGAGCAACAACAACTGAACGCAGTCCACGTTACCGAATCCCAAAACCGCTT
 
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JMSF036N13+           CTCACACATACACTC                                             
JMSF029N07+           CTCACACATACACTCGCTCTCTCTGTNTATAGAAAGACCATAAATCTCTGTCTCTCCCTC
                      ____________________________________________________________
consensus             CTCACACATACACTCGCTCTCTCTGTNTATAGAAAGACCATAAATCTCTGTCTCTCCCTC
 
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JMSF029N07+           TGTCCATGGGGACACCAAATTTTCTCTCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTTTC
                      ____________________________________________________________
consensus             TGTCCATGGGGACACCAAATTTTCTCTCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTTTC