Contig 013410:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF029K22Sequence663013410 (2)ref|XP_010258809.1|2e-33PREDICTED: ceramide kinase-like isoform X1 [Nelumbo nucifera]750000318 (3)ref|XP_010320731.1|2e-82PREDICTED: ceramide kinase isoform X3 [Solanum lycopersicum]
JMSF049M12Sequence601013410 (2)ref|XP_010258809.1|6e-39PREDICTED: ceramide kinase-like isoform X1 [Nelumbo nucifera]816000318 (3)ref|XP_010320731.1|1e-99PREDICTED: ceramide kinase isoform X3 [Solanum lycopersicum]

Alignment

This contig is upended


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JMSF049M12+                                           CTGATTAACCCACATCTGGCACGTCCGC
JMSF029K22+                                                                   CCGC
                      ____________________________________________________________
consensus                                             CTGATTAACCCACATCTGGCACGTCCGC
 
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JMSF049M12+           AGGTCCTTATGGCCAAAACAATACTGCGATGGGATCCAAACAGTAGGGTGGTTTCTTGAC
JMSF029K22+           AGGTCCTTATGGCCAAAACAATACTGCGATGGGATCCAAACAGTAGGGTGGTTTCTTGAC
                      ____________________________________________________________
consensus             AGGTCCTTATGGCCAAAACAATACTGCGATGGGATCCAAACAGTAGGGTGGTTTCTTGAC
 
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JMSF049M12+           TTTTGAATATAGTGTACAGCAAACCTATACATCTCAAATGAGTAGCCAGAGAATAGTCCA
JMSF029K22+           TTTTGAATATAGTGTACAGCAAACCTATACATCTCAAATGAGTAGCCNGAGAATAGTCCA
                      ____________________________________________________________
consensus             TTTTGAATATAGTGTACAGCAAACCTATACATCTCAAATGAGTAGCCAGAGAATAGTCCA
 
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JMSF049M12+           CTAGCATTTGGAAGCGAAGATTCACGAACCAAACCCCAACCAAGAGAGTCAATGGCATAG
JMSF029K22+           CTNGCATTTGGAAGCGAAGATTCACGAACCAAACCCCAACCAAGNGAGTCAATGGCATAG
                      ____________________________________________________________
consensus             CTAGCATTTGGAAGCGAAGATTCACGAACCAAACCCCAACCAAGAGAGTCAATGGCATAG
 
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JMSF049M12+           ACATCACATAATTTCACAGAAATTTCGCATTTGCGGAAAATTTTTAAGCCTAAACAAAGG
JMSF029K22+           ACATCACATAATTTCACAGAAATTTCGCATTTGCGGAAAATTTTTAAGCCTAAACAAAGG
                      ____________________________________________________________
consensus             ACATCACATAATTTCACAGAAATTTCGCATTTGCGGAAAATTTTTAAGCCTAAACAAAGG
 
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JMSF049M12+           GATGGATCATCCTCGTTAGAAACAGATTCAGCTGATNTACAAGACAACCCGTCGGAATTA
JMSF029K22+           GATGGATCATCCTCGTTAGAAACAGATTCAGCTGATNTACAAGACAACCCGTCGGAATTA
                      ____________________________________________________________
consensus             GATGGATCATCCTCGTTAGAAACAGATTCAGCTGATNTACAAGACAACCCGTCGGAATTA
 
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JMSF049M12+           AGGGTGACAACAACCTCTCCAACGCCATCCAAGAAGAGATTTGAGCTCAAGATTGAGCTT
JMSF029K22+           AGGGTGACAACAACCTNTCCAACGCCATCCAAGAAGAGATTTGAGCTCAAGATTGAGCTT
                      ____________________________________________________________
consensus             AGGGTGACAACAACCTCTCCAACGCCATCCAAGAAGAGATTTGAGCTCAAGATTGAGCTT
 
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JMSF049M12+           TGGGAATCATTATCAGCAATTGGGCGAGAATTTTCATCTCCTCCCGGTAATGAATCATCG
JMSF029K22+           TGGGAATCATTATCAGCAATTGGGCGAGAATTTTCATCTCCTCCCGGTAATGAATCATCG
                      ____________________________________________________________
consensus             TGGGAATCATTATCAGCAATTGGGCGAGAATTTTCATCTCCTCCCGGTAATGAATCATCG
 
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JMSF049M12+           CACCTCTCCATAATTTGGAATAGTATATATATTTTTTTTCTATTTTTTTTCTATTTTTCT
JMSF029K22+           CACCTCTCCATAATTTGGAATAGTATATATATTTTTTTTCTATTTTTTTT-TATTTTTCT
                      ____________________________________________________________
consensus             CACCTCTCCATAATTTGGAATAGTATATATATTTTTTTTCTATTTTTTTTCTATTTTTCT
 
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JMSF049M12+           TCAGATAAATATCTGGATTTTATTTGAGCAGAAAATCCTACCCAGTTTCGAGAAACATAA
JMSF029K22+           TCAGATAAATATCTGGATTTTATTTGAGCAGAAAATCCTACCCAGTTTCGAGAAACATAA
                      ____________________________________________________________
consensus             TCAGATAAATATCTGGATTTTATTTGAGCAGAAAATCCTACCCAGTTTCGAGAAACATAA
 
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JMSF049M12+           AAAAAAAGGGGGAAAAATCTGATTGTTAAC                              
JMSF029K22+           AAAAAAAGGGGGAAAAATCTGATTGTTAACGAGAAAGTGAGAAATCGAGTTGGATATTGG
                      ____________________________________________________________
consensus             AAAAAAAGGGGGAAAAATCTGATTGTTAACGAGAAAGTGAGAAATCGAGTTGGATATTGG
 
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JMSF029K22+           GTAAAGCCATAAGGGGATCTTAGCAGACGTGAATCTCGTCAAAACCCAACAACTAAACCC
                      ____________________________________________________________
consensus             GTAAAGCCATAAGGGGATCTTAGCAGACGTGAATCTCGTCAAAACCCAACAACTAAACCC