Contig 013404:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF024P12Sequence644013404 (2)ref|XP_006343987.1|2e-57PREDICTED: glutamate--cysteine ligase, chloroplastic-like [Solanum tuberosum]785007120 (2)gb|AFP93564.1|5e-68GCS [Cestrum nocturnum]
JMSF029C21Sequence647013404 (2)ref|XP_006343987.1|2e-57PREDICTED: glutamate--cysteine ligase, chloroplastic-like [Solanum tuberosum]687007120 (2)gb|AFP93564.1|2e-55GCS [Cestrum nocturnum]

Alignment

This contig is upended


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JMSF024P12+                         CCAATCAAATCTCTCGGCAATACCATTAAGCAACTCAGCTATTTGT
JMSF029C21+                        CCCAATCAAATCTCTCGGCAATACCATTAAGCAACTCAGCTATTTGT
                      ____________________________________________________________
consensus                          CCCAATCAAATCTCTCGGCAATACCATTAAGCAACTCAGCTATTTGT
 
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JMSF024P12+           GCATACTTCATGGGCCGCAAAGTTCCAAACTCAAAACCAAACTTTTCATGCTCTGTGCCT
JMSF029C21+           GCATACTTCATGGGCCGCAAAGTTCCAAACTCAAAACCAAACTTTTCATGCTCTGTGCCT
                      ____________________________________________________________
consensus             GCATACTTCATGGGCCGCAAAGTTCCAAACTCAAAACCAAACTTTTCATGCTCTGTGCCT
 
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JMSF024P12+           ATCCTCCATTTTTCCTTAGGCTTGCAGCCAGAAGTAAGGTAATCAATCAGATCTTTCTTC
JMSF029C21+           ATCCTCCATTTTTCCTTAGGCTTGCAGCCAGAAGTAAGGTAATCAATCAGATCTTTCTTC
                      ____________________________________________________________
consensus             ATCCTCCATTTTTCCTTAGGCTTGCAGCCAGAAGTAAGGTAATCAATCAGATCTTTCTTC
 
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JMSF024P12+           GTTAGCGGCTCTGTGGAAACAACAGCATCCTCAGTTGGAGGACTTGCAGCAACAATAAGC
JMSF029C21+           GTTAGCGGCTCTGTGGAAACAACAGCATCCTCAGTTGGAGGACTTGCAGCAACAATAAGC
                      ____________________________________________________________
consensus             GTTAGCGGCTCTGTGGAAACAACAGCATCCTCAGTTGGAGGACTTGCAGCAACAATAAGC
 
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JMSF024P12+           CCGTGTCGTCGCCTATATCCTGCTCCAATGCAATTCGAACGCAAGCCTTGAACTGCCTGT
JMSF029C21+           CCGTGTCGTCGCCTATATCCTGCTCCAATGCAATTCGAACGCAAGCCTTGAACTGCCTGT
                      ____________________________________________________________
consensus             CCGTGTCGTCGCCTATATCCTGCTCCAATGCAATTCGAACGCAAGCCTTGAACTGCCTGT
 
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JMSF024P12+           GATGAATTCCATGAAGAGAAATTCAAACCAAAACTCATTTCCTTCATTCTATATGCCTCT
JMSF029C21+           GATGAATTCCATGAAGAGAAATTCAAACCAAAACTCATTTCCTTCATTCTATATGCCTCT
                      ____________________________________________________________
consensus             GATGAATTCCATGAAGAGAAATTCAAACCAAAACTCATTTCCTTCATTCTATATGCCTCT
 
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JMSF024P12+           AAATTATTCCCACTGTTAGTACATCCAGCTTCGCATCTTATCATTTCACAATGCAACGAT
JMSF029C21+           AAATTATTCCCACTGTTAGTACATCCAGCTTCGCATCTTATCATTTCACAATGCAACGAT
                      ____________________________________________________________
consensus             AAATTATTCCCACTGTTAGTACATCCAGCTTCGCATCTTATCATTTCACAATGCAACGAT
 
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JMSF024P12+           GACCCTGCCATGGACATCAACGCCATGGCTTTTTACCTTAGTTAAGCAACCCAGAGACCG
JMSF029C21+           GACCCTGCCATGGACATCAACGCCATGGCTTTTTACCTTAGTTAAGCAACCCAGAGACCG
                      ____________________________________________________________
consensus             GACCCTGCCATGGACATCAACGCCATGGCTTTTTACCTTAGTTAAGCAACCCAGAGACCG
 
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JMSF024P12+           AAAATTCTGGGATTTGCTCTTGCAGATTGACGGTGATAAAAAGAAAATGAGACGTATATG
JMSF029C21+           AAAATTCTGGGATTTGCTCTTGCAGATTGACGGTGATAAAAAGAAAATGAGACGTATATG
                      ____________________________________________________________
consensus             AAAATTCTGGGATTTGCTCTTGCAGATTGACGGTGATAAAAAGAAAATGAGACGTATATG
 
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JMSF024P12+           AGAAGACTAGTAAAATTAAATGTGCCGTTTTCTGCTAGTTTGGTCCTTTTTCTTCTCTCT
JMSF029C21+           AGAAGACTAGTAAAATTAAATGTGCCGTTTTCTGCTAGTTTGGTCCTTTTTCTTCTCTCT
                      ____________________________________________________________
consensus             AGAAGACTAGTAAAATTAAATGTGCCGTTTTCTGCTAGTTTGGTCCTTTTTCTTCTCTCT
 
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JMSF024P12+           TCTCTTCCCAAAGTCCTCTTTCTTCTCTTGCACTGTGAGATGACGCCGGAGCGAAGCC  
JMSF029C21+           TCTCTTCCCAAAGTCCTCTTTCTTCTCTTGCACTGTGAGATGACGCCGGAGCGAAGCCCC
                      ____________________________________________________________
consensus             TCTCTTCCCAAAGTCCTCTTTCTTCTCTTGCACTGTGAGATGACGCCGGAGCGAAGCCCC