Contig 013402:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002J24Sequence294013402 (2)ref|XP_006347839.1|5e-16PREDICTED: mitochondrial import inner membrane translocase subunit TIM44-2-like759001265 (2)ref|XP_009779771.1|4e-90PREDICTED: mitochondrial import inner membrane translocase subunit TIM44-2 [Nic
JMSF029A16Sequence640013402 (2)ref|XP_006347839.1|6e-58PREDICTED: mitochondrial import inner membrane translocase subunit TIM44-2-like735001265 (2)ref|XP_009616194.1|4e-84PREDICTED: mitochondrial import inner membrane translocase subunit TIM44-2 isof

Alignment

This contig is upended


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JMSF029A16+                               ATTTGAGCTGCAACTGTCGGAGTTTACATTTGATCCTTCA
                      ____________________________________________________________
consensus                                 ATTTGAGCTGCAACTGTCGGAGTTTACATTTGATCCTTCA
 
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JMSF029A16+           GAGTCTTGCTTCCCATACCCAAAAGTTTCTTTGACCTCTTCCTTAGCAGCAGAAACCTTT
                      ____________________________________________________________
consensus             GAGTCTTGCTTCCCATACCCAAAAGTTTCTTTGACCTCTTCCTTAGCAGCAGAAACCTTT
 
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JMSF029A16+           TCCCCGACATTAGCATAAACCTTTTTTGCTGTAGATTCAGCCTCTGTCCAGACACCATCC
                      ____________________________________________________________
consensus             TCCCCGACATTAGCATAAACCTTTTTTGCTGTAGATTCAGCCTCTGTCCAGACACCATCC
 
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JMSF029A16+           ACATGCTTGTAAAGCTGCTCAGTAGTCTGCTTTGTTCTTGCTTTTAGATCTTCTTTGACT
                      ____________________________________________________________
consensus             ACATGCTTGTAAAGCTGCTCAGTAGTCTGCTTTGTTCTTGCTTTTAGATCTTCTTTGACT
 
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JMSF002J24+                                               ACTGACTGTTGGAATTCCTTGTTT
JMSF029A16+           CCTTGAAGCTCTTCTGCTTTATCTTTCAGTTCTTTGACTGACTGCTGAAATTCCTTGTTT
                      ____________________________________________________________
consensus             CCTTGAAGCTCTTCTGCTTTATCTTTCAGTTCTTTGACTGACTGTTGGAATTCCTTGTTT
 
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JMSF002J24+           CTGTTAAACTCGCCTTTGAATTTCTGAGAGAACTCATTGAATACACTGAATTGGCGATTA
JMSF029A16+           CTGTTAACTTCACCTTTAAGTTTCTGAGAGAATTCATTGAATACACTGAATTGACGATTA
                      ____________________________________________________________
consensus             CTGTTAACTTCGCCTTTGAGTTTCTGAGAGAATTCATTGAATACACTGAATTGGCGATTA
 
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JMSF002J24+           CCCGCGTAGCCATATGCCTGGACCAACCTTAAACTTGTTGCGCCTCT------ACCCACC
JMSF029A16+           CCCACGTAGCCATATGCCTGACCCAATCTCAAACTTGTTGCACCTCTGCTTGAAATCACC
                      ____________________________________________________________
consensus             CCCGCGTAGCCATATGCCTGGCCCAATCTTAAACTTGTTGCGCCTCTGCTTGAACTCACC
 
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JMSF002J24+           TGCTGAGGTACTAATAGCTGATGGATAATGGGTCGTGTTTTGGAGAACAAAAAATCCCGA
JMSF029A16+           TGCTGAGGTACTAATAGCTGATGGAAAACGGGTTGTCTTTTGGAAAGCAAAAAATCTCGA
                      ____________________________________________________________
consensus             TGCTGAGGTACTAATAGCTGATGGATAATGGGTTGTGTTTTGGAGAGCAAAAAATCTCGA
 
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JMSF002J24+           ACTAATTTTCTGCTAGCCATTGGAGGCTGCGGATGAATGTGG                  
JMSF029A16+           ACTAATTTTCTGCTGGCCATTGAAGTCCACGGATGAATGTGGCACGCATAATCCTATCCC
                      ____________________________________________________________
consensus             ACTAATTTTCTGCTGGCCATTGGAGTCTGCGGATGAATGTGGCACGCATAATCCTATCCC
 
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JMSF029A16+           CTTCAAGCTTTCCACTTTCAACCAAAATTCTTCGGAAATATTGTTTTGAGGTGTCCAACT
                      ____________________________________________________________
consensus             CTTCAAGCTTTCCACTTTCAACCAAAATTCTTCGGAAATATTGTTTTGAGGTGTCCAACT
 
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JMSF029A16+           GTGGACGTTGGAGATGGATGTTCTTACGAAAAATTGAAGAAATAACCCTAGATGCTACCC
                      ____________________________________________________________
consensus             GTGGACGTTGGAGATGGATGTTCTTACGAAAAATTGAAGAAATAACCCTAGATGCTACCC