| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN016I02 | Sequence | 605 | 013395 (7) | ref|XP_011086701.1| | 1e-100 | PREDICTED: probable pectate lyase 5 [Sesamum indicum] | |||||
| JMSF027H12 | Sequence | 639 | 013395 (7) | ref|XP_011086701.1| | 6e-102 | PREDICTED: probable pectate lyase 5 [Sesamum indicum] | 790 | 013395 (7) | ref|XP_009804979.1| | 1e-151 | PREDICTED: probable pectate lyase 5 [Nicotiana sylvestris] |
| JMSF042C06 | Sequence | 743 | 013395 (7) | ref|XP_011086701.1| | 3e-132 | PREDICTED: probable pectate lyase 5 [Sesamum indicum] | 705 | 013395 (7) | emb|CAN76500.1| | 7e-118 | hypothetical protein VITISV_004734 [Vitis vinifera] |
| JMSF053M03 | Sequence | 618 | 013395 (7) | ref|XP_011086701.1| | 5e-102 | PREDICTED: probable pectate lyase 5 [Sesamum indicum] | 889 | 013395 (7) | ref|XP_009804979.1| | 2e-163 | PREDICTED: probable pectate lyase 5 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMSF042C06- GCATCTTGA
rJMSF053M03- TACATATGCATCTTGA
____________________________________________________________
consensus TACATATGCATCTTGA
. : . : . : . : . : . :
rJMSF027H12- CTCTAATTTATATATATACAAATC
rJMSF042C06- TTATAGGTATATACTACGTACATATATTTATAATCACTCTAATTTATATATATACAAATC
rJMSF053M03- TTATAGGTATATACTACGTACATATATTTATAATCACTCTAATTTATATATATACAAATC
____________________________________________________________
consensus TTATAGGTATATACTACGTACATATATTTATAATCACTCTAATTTATATATATACAAATC
. : . : . : . : . : . :
rJMSF027H12- GGTTAATTAGCAGCTTTTGCCTTTTTTGCAGGGAAGTGCACCAGCTCCCCCAGTCAAAGA
rJMSF042C06- GGTTAATTAGCAGCTTTTGCCTTTTTTGCAGGGAAGTGCACCAGCTCCCCCAGTCAAAGA
rJMSF053M03- GGTTAATTAGCAGCTTTTGCCTTTTTTGCAGGGAAGTGCACCAGCTCCCCCAGTCAAAGA
____________________________________________________________
consensus GGTTAATTAGCAGCTTTTGCCTTTTTTGCAGGGAAGTGCACCAGCTCCCCCAGTCAAAGA
. : . : . : . : . : . :
rJMSF027H12- GCCAACCAGCGAGGATGGTCTAGCGCTGAGGCTGGAGGCTTTTGCATAGCTAGATGATGC
rJMSF042C06- GCCAACCAGCGAGGATGGTCTAGCGCTGAGGCTGGAGGCTTTTGCATAGCTAGATGATGC
rJMSF053M03- GCCAACCAGCGAGGATGGTCTAGCGCTGAGGCTGGAGGCTTTTGCATAGCTAGATGATGC
____________________________________________________________
consensus GCCAACCAGCGAGGATGGTCTAGCGCTGAGGCTGGAGGCTTTTGCATAGCTAGATGATGC
. : . : . : . : . : . :
rJMSF027H12- TCCTGCACTACCTGACGTGGTGAAGAATGCACCATTCAGCATCAGGTCTCCTTCTGACCT
rJMSF042C06- TCCTGCACTACCTGACGTGGTGAAGAATGCACCATTCAGCATCAGGTCTCCTTCTGACCT
rJMSF053M03- TCCTGCACTACCTGACGTGGTGAAGAATGCACCATTCAGCATCAGGTCTCCTTCTGACCT
____________________________________________________________
consensus TCCTGCACTACCTGACGTGGTGAAGAATGCACCATTCAGCATCAGGTCTCCTTCTGACCT
. : . : . : . : . : . :
rJMSF027H12- CCAATTCCAGCCCTTCCACTGACTCTCTGGTGCATCCTCATGTTTCGTCACTTCCTTATT
rJMSF042C06- CCAATTCCAGCCCTTCCACTGACTCTCTGGTGCATCCTCATGTTTCGTCACTTCCTTATT
rJMSF053M03- CCAATTCCAGCCCTTCCACTGACTCTCTGGTGCATCCTCATGTTTCGTCACTTCCTTATT
____________________________________________________________
consensus CCAATTCCAGCCCTTCCACTGACTCTCTGGTGCATCCTCATGTTTCGTCACTTCCTTATT
. : . : . : . : . : . :
rJMSF027H12- GAACCTATCATTCGGAGCTAGAAATCTGTTCCCTTGGCTGTTGATTGTAGGATCAGCACT
rJMSF042C06- GAACCTATCATTCGGAGCTAGAAATCTGTTCCCTTGGCTGTTGATTGTAGGATCAGCACT
rJMSF053M03- GAACCTATCATTCGGAGCTAGAAATCTGTTCCCTTGGCTGTTGATTGTAGGATCAGCACT
____________________________________________________________
consensus GAACCTATCATTCGGAGCTAGAAATCTGTTCCCTTGGCTGTTGATTGTAGGATCAGCACT
. : . : . : . : . : . :
rJMSF027H12- GCCTCCAATTGCATACATCTCCCAGTGTGTATAGTCATTATTCACCACATGAAAGTAACC
rJMSF042C06- GCCTCCAATTGCATACATCTCCCAGTGTGTATAGTCATTATTCACCACATGAAAGTAACC
rJMSF053M03- GCCTCCAATTGCATACATCTCCCAGTGTGTATAGTCATTATTCACCACATGAAAGTAACC
____________________________________________________________
consensus GCCTCCAATTGCATACATCTCCCAGTGTGTATAGTCATTATTCACCACATGAAAGTAACC
. : . : . : . : . : . :
rJMSF027H12- ATGCCTACACCTTGGCATTCTCTGAATGAGGCCTTCCCCAAAATGGTTGAAGGCTATGGT
rJMSF042C06- ATGCCTACACCTTGGCATTCTCTGAATGAGGCCTTCCCCAAAATGGTTGAAGGCTATGGT
rJMSF053M03- ATGCCTACACCTTGGCATTCTCTGAATGAGGCCTTCCCCAAAATGGTTGAAGGCTATGGT
____________________________________________________________
consensus ATGCCTACACCTTGGCATTCTCTGAATGAGGCCTTCCCCAAAATGGTTGAAGGCTATGGT
. : . : . : . : . : . :
rJMSF027H12- GACTTGCATGCCCTTGTCCTGAATGTAAGTGTCACTGTGTCCCAAGAGCATAACCTTGTT
rJMSF042C06- GACTTGCATGCCCTTGTCCTGAATGTAAGTGTCACTGTGTCCCAAGAGCATAACCTTGTT
rJMSF053M03- GACTTGCATGCCCTTGTCCTGAATGTAAGTGTCACTGTGTCCCAAGAGCATAACCTTGTT
____________________________________________________________
consensus GACTTGCATGCCCTTGTCCTGAATGTAAGTGTCACTGTGTCCCAAGAGCATAACCTTGTT
. : . : . : . : . : . :
rJMSF027H12- GTGGTGTGTCATGTAGTTGTTGGAGATTGTAATGGCTGTTGATCCACGGATGGCGTCTAC
rJMSF042C06- GTGGTGTGTCATGTAGTTGTTGGAGATTGTAATGGCTGTTGATCCACGGATGGCGTCTAC
rJMSF053M03- GTGGTGTGTCATGTAGTTGTTGGAGATTGTAATGGCTGTTGATCCACGGATGGCGTCTAC
____________________________________________________________
consensus GTGGTGTGTCATGTAGTTGTTGGAGATTGTAATGGCTGTTGATCCACGGATGGCGTCTAC
. : . : . : . : . : . :
rJMSF027H12- CAACCCATCCCTGCAGTTTGACAGAGAGCAATGATCTACCCAGACATGGCTTCCCCCAAA
rJMSF042C06- CAACCCATCCCTGCAGTTTGACAGAGAGCAATGATCTACCCAGACATGGCTTCCCCCAAA
rJMSF053M03- CAACCCATCCCTGCAGTTTGACAGAGAGCAATGATCTACCCAGACATGGCTTCCCCCAAA
JMSF042C06+ TTGACAGAGAGCAATGATCTACCCAGACATGGCTTCCCCCAAA
____________________________________________________________
consensus CAACCCATCCCTGCAGTTTGACAGAGAGCAATGATCTACCCAGACATGGCTTCCCCCAAA
. : . : . : . : . : . :
rJMSF027H12- AATTGAAACTCCATCACCGTCTGACAGAGTCCTCCATCCATAATGCTCAGGTGAGTCCCT
rJMSF042C06- AATTGAAACTCCATCACCGTCTGACAGAGT
rJMSF053M03- AATTGAAACTCCATCACCGTCTGACAGAGTCCTCCATCCATAATGCTCAGGTGAGTCCCT
JMSF042C06+ AATTGAAACTCCATCACCGTCTGACAGAGTCCTCCATCCATAATGCTCAGGTGAGTCCCT
____________________________________________________________
consensus AATTGAAACTCCATCACCGTCTGACAGAGTCCTCCATCCATAATGCTCAGGTGAGTCCCT
. : . : . : . : . : . :
rJMSF027H12- CACATTTGCATTCCCTCCTTGCTGGCAGTCATGAATGTTCAAGCCATGGATGATTATATT
rJMSF053M03- CACATTTGCATTCCCTCCTTGCTGGCAGTCATGAATGTTCAAGCCATGGATGATTATATT
JMFN016I02+ CAGTCATGAATGTTCAAGCCATGGATGATTATATT
JMSF053M03+ CTGGCAGTCATGAATGTTCAAGCCATGGATGATTATATT
JMSF042C06+ CACATTTGCATTCCCTCCTTGCTGGCAGTCATGAATGTTCAAGCCATGGATGATTATATT
JMSF027H12+ CTGGCAGTCATGAATGTTCAAGCCATGGATGATTATATT
____________________________________________________________
consensus CACATTTGCATTCCCTCCTTGCTGGCAGTCATGAATGTTCAAGCCATGGATGATTATATT
. : . : . : . : . : . :
rJMSF027H12- TGTGACATACTGGATAGTANTGCATGGTCCACCTGCAATGTGTACA
rJMSF053M03- TGTGACATACTGGATAGTAATGCATGGTCCACCTGCAATGTGTACACTAGCCCCTCTTCC
JMFN016I02+ TGTGACATACTGGATAGTAATGCATGGTCCACCTGCAATGTGTACACTAGCCCCTCTTCC
JMSF053M03+ TGTGACATACTGGATAGTAATGCATGGTCCACCTGCAATGTGTACACTAGCCCCTCTTCC
JMSF042C06+ TGTGACATACTGGATAGTAATGCATGGTCCACCCGCAATGTGTACACTAGCCCCTCTTCC
JMSF027H12+ TGTGACATACTGGATAGTAATGCATGGTCCACCTGCAATGTGTACACTAGCCCCTCTTCC
____________________________________________________________
consensus TGTGACATACTGGATAGTAATGCATGGTCCACCTGCAATGTGTACACTAGCCCCTCTTCC
. : . : . : . : . : . :
rJMSF053M03- ATCTATGGTCTTGAATGAGTTCATTATGAGTTC
JMFN016I02+ ATCTATGGTCTTGAATGAGTTCATTATGAGTTCTTCCTTGAGCTTGATCACCATGTCCCT
JMSF053M03+ ATCTATGGTCTTGAATGAGTTCATTATGAGTTCTTCCTTGAGCTTGATCACCATGTCCCT
JMSF042C06+ ATCTATGGTCTTGAATGAGTTCATTATGAGTTCTTCCTTGAGCTTGATCACCATGTCCCT
JMSF027H12+ ATCTATGGTCTTGAATGAGTTCATTATGAGTTCTTCCTTGAGCTTGATCACCATGTCCCT
____________________________________________________________
consensus ATCTATGGTCTTGAATGAGTTCATTATGAGTTCTTCCTTGAGCTTGATCACCATGTCCCT
. : . : . : . : . : . :
JMFN016I02+ GGCAAAAATGATCCACAATGGTTCATCTTGTATGGCTCCATATCTTAAGGTCCCTGGCTT
JMSF053M03+ GGCAAAAATGATCCACAATGGTTCATCTTGTATGGCTCCATATCTTAAGGTCCCTGGCTT
JMSF042C06+ GGCAAAAATGATCCACAATGGTTCATCTTGTATGGCTCCATATCTTAAGGTCCCTGGCTT
JMSF027H12+ GGCAAAAATGATCCACAATGGTTCATCTTGTATGGCTCCATATCTTAAGGTCCCTGGCTT
____________________________________________________________
consensus GGCAAAAATGATCCACAATGGTTCATCTTGTATGGCTCCATATCTTAAGGTCCCTGGCTT
. : . : . : . : . : . :
JMFN016I02+ GGGATTCACAGCGTCATCCCCTGTGTCTGTCACCACATAGAGTTTGCCATCCCTTCCACC
JMSF053M03+ GGGATTCACAGCGTCATCCCCTGTGTCTGTCACCACATAGAGTTTGCCATCCCTTCCACC
JMSF042C06+ GGGATTCACAGCGTCATCCCCTGTGTCTGTCACCACATAGAGTTTGCCATCCCTTCCACC
JMSF027H12+ GGGATTCACAGCGTCATCCCCTGTGTCTGTCACCACATAGAGTTTGCCATCCCTTCCACC
____________________________________________________________
consensus GGGATTCACAGCGTCATCCCCTGTGTCTGTCACCACATAGAGTTTGCCATCCCTTCCACC
. : . : . : . : . : . :
JMFN016I02+ AATGGCTTGTTTTCCAAACCCAATTGCGCAATCGGCTAGCCTCTGCCGGTTGCTTTCCCA
JMSF053M03+ AATGGCTTGTTTTCCAAACCCAATTGCGCAATCGGCTAGCCTCTGCCGGTTGCTTTCCCA
JMSF042C06+ AATGGCTTGTTTTCCAAACCCAATTGCGCAATCGGCTAGCCTCTGCCGGTTGCTTTCCCA
JMSF027H12+ AATGGCTTGTTTTCCAAACCCAATTGCGCAATCGGCTAGCCTCTGCCGGTTGCTTTCCCA
____________________________________________________________
consensus AATGGCTTGTTTTCCAAACCCAATTGCGCAATCGGCTAGCCTCTGCCGGTTGCTTTCCCA
. : . : . : . : . : . :
JMFN016I02+ GTTGGGGTCACACCTCCAGCAATCATCAATTGGGTTGCCTGTGCCACATGACAAGAACCC
JMSF053M03+ GTTGGGGTCACACCTCCAGCAATCATCAATTGGGTTGCCTGTGCCACATGACAAGAACCC
JMSF042C06+ GTTGGGGTCACACCTCCAGCAATCATCAATTGGGTTGCCTGTGCCACATGACAAGAACCC
JMSF027H12+ GTTGGGGTCACACCTCCAGCAATCATCAATTGGGTTGCCTGTGCCACATGACAAGAACCC
____________________________________________________________
consensus GTTGGGGTCACACCTCCAGCAATCATCAATTGGGTTGCCTGTGCCACATGACAAGAACCC
. : . : . : . : . : . :
JMFN016I02+ CAACTTCCTCCTTGCAATTGTTGCATTAGCTATTTTCTCATTGACTTCTTGGACTATGAG
JMSF053M03+ CAACTTCCTCCTTGCAATTGTTGCATTAGCTATTTTCTCATTGACTTCTTGGACTATGAG
JMSF042C06+ CAACTTCCTCCTTGCAATTGTTGCATTAGCTATTTTCTCATTGACTTCTTGGACTATGAG
JMSF027H12+ CAACTTCCTCCTTGCAATTGTTGCATTAGCTATTTTCTCATTGACTTCTTGGACTATGAG
____________________________________________________________
consensus CAACTTCCTCCTTGCAATTGTTGCATTAGCTATTTTCTCATTGACTTCTTGGACTATGAG
. : . : . : . : . : . :
JMFN016I02+ TTCAGGGTCTGGATATGGTGAAGAGAAAGTGCAGGTGGGAGCTAGAAGAGGGAGGAGGAA
JMSF053M03+ TTCAGGGTCTGGATATGGTGAAGAGAAAGTGCAGGTGGGAGCTAGAAGAGGGAGGAGGAA
JMSF042C06+ TTCAGGGTCTGGATATGGTGAAGAGAAAGTGCAGGTGGGAGCTAGAAGAGGGAGGAGGAA
JMSF027H12+ TTCAGGGTCTGGATATGGTGAAGAGAAAGTGCAGGTGGGAGCTAGAAGAGGGAGGAGGAA
____________________________________________________________
consensus TTCAGGGTCTGGATATGGTGAAGAGAAAGTGCAGGTGGGAGCTAGAAGAGGGAGGAGGAA
. : . : . : . : . : . :
JMFN016I02+ GAGGAGGTAGTAAAGTGGCAATGCCATTATCCGCAAATCCCTTGGTAGGGAGGGGGGCTA
JMSF053M03+ GAGGAGGTAGTAAAGTGGCAATGCCATTATCCGCAAATCCCTTGGTAGGGAGGGGGGCTA
JMSF042C06+ GAGGAGGTAGTAAAGTGGCAATGCCATTATCCGCAAATCCCTTGGTAGGGAGGGGGGCTA
JMSF027H12+ GAGGAGGTAGTAAAGTGGCAATGCCATTATCCGCAAATCCCTTGGTAGGGAGGGGGGCTA
____________________________________________________________
consensus GAGGAGGTAGTAAAGTGGCAATGCCATTATCCGCAAATCCCTTGGTAGGGAGGGGGGCTA
. : . : . : . : . : . :
JMFN016I02+ GAGAAAGGAAAAAATGGAATATGGAAGTGT
JMSF053M03+ GAGAAAGGAAAAAATGGAATATGGAAGTGTAGGATGCA
JMSF042C06+ GAGAAAGGAAAAAATGGAATATGGAAGTGTAGGATGCA
JMSF027H12+ GAGAAAGGAAAAAATGGAATATGGAAGTGTAGGATGCATGAAGAAAGGGAACTGAGGTTC
____________________________________________________________
consensus GAGAAAGGAAAAAATGGAATATGGAAGTGTAGGATGCATGAAGAAAGGGAACTGAGGTTC