Contig 013393:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN043B19Sequence348013393 (2)emb|CDP05225.1|2e-38unnamed protein product [Coffea canephora]
JMSF027G02Sequence622013393 (2)ref|XP_006353339.1|2e-47PREDICTED: transmembrane protein 161A-like [Solanum tuberosum]716023547ref|XP_009603018.1|200PREDICTED: uncharacterized protein LOC104098065 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN043B19+ CTCAAAAG
JMSF027G02+ TTGGAGGAAGACCCCTCAAAAG
                      ____________________________________________________________
consensus TTGGAGGAAGACCCCTCAAAAG
 
. : . : . : . : . : . :
JMFN043B19+ CAGTCCTAGCTATCAAAACAAACAGCCTACACACAACAAAACATCCTAAAAAGACCGGAA
JMSF027G02+ CAGTCCTAGCTATCAAAACAAACAGCCTACNCACAACAAAACATCCTAAAAAGACCGGAA
                      ____________________________________________________________
consensus CAGTCCTAGCTATCAAAACAAACAGCCTACACACAACAAAACATCCTAAAAAGACCGGAA
 
. : . : . : . : . : . :
JMFN043B19+ CCACAGATCCATGTCCTGGCCACCCAGAATCTCCAGATTTCCCCAAGAACCGGTCAAGCA
JMSF027G02+ CCACAGATCCATGTCCTGGCCACCCAGAATCTCCAGATTTCCCCAAGAACCGGTCAAGCA
                      ____________________________________________________________
consensus CCACAGATCCATGTCCTGGCCACCCAGAATCTCCAGATTTCCCCAAGAACCGGTCAAGCA
 
. : . : . : . : . : . :
JMFN043B19+ ACAAGCAGGAAACAGCTACAACAGTGGAATTGAAAACATGTTTAAATTCATTGAAATATA
JMSF027G02+ ACAAGCAGGAAACAGCTACAACAGTGGAATTGAAAACATGTTTAAATTCATTGAAATATA
                      ____________________________________________________________
consensus ACAAGCAGGAAACAGCTACAACAGTGGAATTGAAAACATGTTTAAATTCATTGAAATATA
 
. : . : . : . : . : . :
JMFN043B19+ TTCTTGTTTGGAGGTGGGTGTCAATCAGCTTCAGCCTAAAGATCTGAGCTTTATTTTCAT
JMSF027G02+ TTCTTGTTTGGAGGTGGGTGTCAATCAGCTTCAGCCTAAAGATCTGAGCTTTATTTTCAT
                      ____________________________________________________________
consensus TTCTTGTTTGGAGGTGGGTGTCAATCAGCTTCAGCCTAAAGATCTGAGCTTTATTTTCAT
 
. : . : . : . : . : . :
JMFN043B19+ CAAACTCGAATTTAGACTTTTTCCTGGGCTTGAGTTCAGATTCAACACTACCTGGCCGTC
JMSF027G02+ CAAACTCGAATTTAGACTTTTTCCTGGGCTTGAGTTCAGATTCAACACTACCTGGCCGTC
                      ____________________________________________________________
consensus CAAACTCGAATTTAGACTTTTTCCTGGGCTTGAGTTCAGATTCAACACTACCTGGCCGTC
 
. : . : . : . : . : . :
JMFN043B19+ GAATCGCAGCCCTGGCACCGTT
JMSF027G02+ GAATCGCAGCCCTGGCACCGTTTGAAGAAGTGGGGTTGACGTCGTCTGGGTGGACATAGG
                      ____________________________________________________________
consensus GAATCGCAGCCCTGGCACCGTTTGAAGAAGTGGGGTTGACGTCGTCTGGGTGGACATAGG
 
. : . : . : . : . : . :
JMSF027G02+ TGAAGAGGCCATGGAGGAATAAAGCAGGGATCTTGAACAAGTAGAGGAGGAGAAAGAGGG
                      ____________________________________________________________
consensus TGAAGAGGCCATGGAGGAATAAAGCAGGGATCTTGAACAAGTAGAGGAGGAGAAAGAGGG
 
. : . : . : . : . : . :
JMSF027G02+ AGAAGGCAAGCGCGGTTTGGAGAATGAAGCTGCTTGATGAGAATACAAGTGCAGATAAAG
                      ____________________________________________________________
consensus AGAAGGCAAGCGCGGTTTGGAGAATGAAGCTGCTTGATGAGAATACAAGTGCAGATAAAG
 
. : . : . : . : . : . :
JMSF027G02+ AAGCGATCATGATATTCAGAAATTATGGAGACAGCATCCAGATTCCNCCTAAGACTTTGA
                      ____________________________________________________________
consensus AAGCGATCATGATATTCAGAAATTATGGAGACAGCATCCAGATTCCNCCTAAGACTTTGA
 
. : . : . : . : . : . :
JMSF027G02+ TGTTTACAGAGTTTTGCAGTGAAGGGACGAAATGGCGGAAGATCTAAGCACATGAGCACC
                      ____________________________________________________________
consensus TGTTTACAGAGTTTTGCAGTGAAGGGACGAAATGGCGGAAGATCTAAGCACATGAGCACC