Contig 013391:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF027A10Sequence607013391 (2)ref|XP_004238365.1|225PREDICTED: uncharacterized protein LOC101264926 [Solanum lycopersicum]788013391 (2)ref|XP_009625710.1|264PREDICTED: uncharacterized protein LOC104116538 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF027A10-                                                           TAATGCCCTCA
                      ____________________________________________________________
consensus                                                              TAATGCCCTCA
 
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rJMSF027A10-          CAAGTAATGTTTATGTAATGTCTATCATCAGAGCCAAAAACAGTAAATAGTACCAGATGA
                      ____________________________________________________________
consensus             CAAGTAATGTTTATGTAATGTCTATCATCAGAGCCAAAAACAGTAAATAGTACCAGATGA
 
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rJMSF027A10-          GGATTGTCTACTCAACTGGAAGCTGCTTAGCTATGCGTAGAAGGAAACGAGTGAGGGACT
                      ____________________________________________________________
consensus             GGATTGTCTACTCAACTGGAAGCTGCTTAGCTATGCGTAGAAGGAAACGAGTGAGGGACT
 
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rJMSF027A10-          TTTTGGCATTGATAAAAGTTATATCCACTTCGCTTTCCTTTCCCTCTTCACTGACTTCTG
                      ____________________________________________________________
consensus             TTTTGGCATTGATAAAAGTTATATCCACTTCGCTTTCCTTTCCCTCTTCACTGACTTCTG
 
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rJMSF027A10-          GCCGTTGGATGGATTGAACTTTACGGACTAGGCTCCGCAATTCCTGACGATCAAACTCGA
                      ____________________________________________________________
consensus             GCCGTTGGATGGATTGAACTTTACGGACTAGGCTCCGCAATTCCTGACGATCAAACTCGA
 
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rJMSF027A10-          CCTCACGCAGAGAATATATTTCATTGCTAACCTCGACGTCCTTATTGATCAAGCCATCAA
                      ____________________________________________________________
consensus             CCTCACGCAGAGAATATATTTCATTGCTAACCTCGACGTCCTTATTGATCAAGCCATCAA
 
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rJMSF027A10-          ACCATCTGTCAGCCAATTCAATACTCTCTTCATTATCATCATCCTCATCCTCGTCCTCAG
JMSF027A10+                                                                TCCTCAG
                      ____________________________________________________________
consensus             ACCATCTGTCAGCCAATTCAATACTCTCTTCATTATCATCATCCTCATCCTCGTCCTCAG
 
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rJMSF027A10-          ATTCATAAACTTCATCATCATTTTCATCTTCAGTACTCCATATTATTGAACCAGATAAAG
JMSF027A10+           ATTCATAAACTTCATCATCATTTTCATCTTCAGTACTCCATATTATTGAACCAGATAAAG
                      ____________________________________________________________
consensus             ATTCATAAACTTCATCATCATTTTCATCTTCAGTACTCCATATTATTGAACCAGATAAAG
 
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rJMSF027A10-          CCTGAAACTTATTCTGGTCACCATCTTTTGTTGCCTCAATTAAGCCATCCATCAATTCAG
JMSF027A10+           CCTGAAACTTATTCTGGTCACCATCTTTTGTTGCCTCAATTAAGCCATCCATCAATTCAG
                      ____________________________________________________________
consensus             CCTGAAACTTATTCTGGTCACCATCTTTTGTTGCCTCAATTAAGCCATCCATCAATTCAG
 
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rJMSF027A10-          GTTCTACATCCCGAAGTAGTCTACCTATATAGTTGAATTGTCTGCGTTTTCCTTCTCGGA
JMSF027A10+           GTTCTACATCCCGAAGTAGTCTACCTATATAGTTGAATTGTCTGCGTTTTCCTTCTCGGA
                      ____________________________________________________________
consensus             GTTCTACATCCCGAAGTAGTCTACCTATATAGTTGAATTGTCTGCGTTTTCCTTCTCGGA
 
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rJMSF027A10-          CGTCACGACCTAATCTCTTAACAAGCATGATTGCCTCGTAAACCTCCCGCTCAAGTGCAG
JMSF027A10+           CGTCACGACCTAATCTCTTAACAAGCATGATTGCCTCGTAAACCTCCCGCTCAAGTGCAG
                      ____________________________________________________________
consensus             CGTCACGACCTAATCTCTTAACAAGCATGATTGCCTCGTAAACCTCCCGCTCAAGTGCAG
 
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rJMSF027A10-          CAACTCTGAGAATACGTTTGATTTGAGGAGGCTGGAACTTAGCCAGTTCCATTCCCCAGC
JMSF027A10+           CAACTCTGAGAATACGTTTGATTTGAGGAGGCTGGAACTTAGCCAGTTCCATTCCCCAGC
                      ____________________________________________________________
consensus             CAACTCTGAGAATACGTTTGATTTGAGGAGGCTGGAACTTAGCCAGTTCCATTCCCCAGC
 
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rJMSF027A10-          GTACACAGCGCTGAGCTTCGCGCTTCTTCTCATTCCTGCTCTTCTTTAGCGGCGTATCGG
JMSF027A10+           GTACACAGCGCTGAGCTTCGCGCTTCTTCTCATTCCTGCTCTTCTTTAGCGGCGTATCGG
                      ____________________________________________________________
consensus             GTACACAGCGCTGAGCTTCGCGCTTCTTCTCATTCCTGCTCTTCTTTAGCGGCGTATCGG
 
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rJMSF027A10-          ATTCGCTGCCGCTCGACTCAGGCGGTACGGGAGCGTCCCGCAGTCTANNGGCGCCGG   
JMSF027A10+           ATTCGCTGCCGCTCGACTCAGGCGGTACGGGAGCGTCCCGCAGTCTAATGGCGCCGGCAC
                      ____________________________________________________________
consensus             ATTCGCTGCCGCTCGACTCAGGCGGTACGGGAGCGTCCCGCAGTCTAATGGCGCCGGCAC
 
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JMSF027A10+           CGGAGCTGAGGTGGCGAGACGCCAAAGGAATCGAAGAAAACTGCGGCCGACGGCAGAAGC
                      ____________________________________________________________
consensus             CGGAGCTGAGGTGGCGAGACGCCAAAGGAATCGAAGAAAACTGCGGCCGACGGCAGAAGC
 
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JMSF027A10+           TAGCAGGAGAAGACGGTAACGGAGAATGGAGAAACCGAATCATTACTGCGCGGGAACAAA
                      ____________________________________________________________
consensus             TAGCAGGAGAAGACGGTAACGGAGAATGGAGAAACCGAATCATTACTGCGCGGGAACAAA
 
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JMSF027A10+           CATGGTGATGCCATCTTGGCCAGTTCAATAAAGCCTTCATCGCACGCACCATTGCTCTTC
                      ____________________________________________________________
consensus             CATGGTGATGCCATCTTGGCCAGTTCAATAAAGCCTTCATCGCACGCACCATTGCTCTTC