Contig 013382:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012M16Sequence521013382 (9)ref|XP_006347390.1|199PREDICTED: uncharacterized protein LOC102602040 [Solanum tuberosum]685004162 (8)ref|XP_002525667.1|1e-19conserved hypothetical protein [Ricinus communis] gb|EEF36785.1| conserved hypot
JMFF025C13Sequence441013382 (9)ref|XP_006347390.1|111PREDICTED: uncharacterized protein LOC102602040 [Solanum tuberosum]711004162 (8)ref|XP_002525667.1|2e-33conserved hypothetical protein [Ricinus communis] gb|EEF36785.1| conserved hypot
JMFF045F06Sequence627013382 (9)ref|XP_006347390.1|162PREDICTED: uncharacterized protein LOC102602040 [Solanum tuberosum]596004162 (8)emb|CDP18515.1|1e-10unnamed protein product [Coffea canephora]
JMFF046A04Sequence571013382 (9)ref|XP_006347390.1|219PREDICTED: uncharacterized protein LOC102602040 [Solanum tuberosum]563004162 (8)ref|XP_002525667.1|1e-10conserved hypothetical protein [Ricinus communis] gb|EEF36785.1| conserved hypot
JMFF050B04Sequence630013382 (9)ref|XP_006347390.1|197PREDICTED: uncharacterized protein LOC102602040 [Solanum tuberosum]633004162 (8)ref|XP_002525667.1|1e-10conserved hypothetical protein [Ricinus communis] gb|EEF36785.1| conserved hypot
JMFF050K06Sequence574013382 (9)ref|XP_006347390.1|217PREDICTED: uncharacterized protein LOC102602040 [Solanum tuberosum]596004162 (8)emb|CDP18515.1|1e-10unnamed protein product [Coffea canephora]
JMFS169C01Sequence613013382 (9)ref|XP_006347390.1|227PREDICTED: uncharacterized protein LOC102602040 [Solanum tuberosum]
JMSF025P13Sequence693013382 (9)ref|XP_006347390.1|236PREDICTED: uncharacterized protein LOC102602040 [Solanum tuberosum]739004162 (8)ref|XP_002525667.1|1e-43conserved hypothetical protein [Ricinus communis] gb|EEF36785.1| conserved hypot
JMSF037G17Sequence623013382 (9)ref|XP_006347390.1|118PREDICTED: uncharacterized protein LOC102602040 [Solanum tuberosum]695004162 (8)ref|XP_002525667.1|4e-34conserved hypothetical protein [Ricinus communis] gb|EEF36785.1| conserved hypot

Alignment

This contig is upended


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JMFF045F06+                 CAGGAAGCAAGGCGTAGAGCTTTACACCAGGATTCCTTATCCCAAGATGTTTCA
JMSF037G17+                                                            AAGATGTTTCA
JMFS169C01+                                              GGATTCCTTATCCCAAGATGTTTCA
JMFF050K06+                                                                      A
JMFF046A04+                                                          CCAAGATGTTTCA
JMSF025P13+                                      TTACACCAGGATTCCTTATCCCAAGATGTTTCA
                      ____________________________________________________________
consensus                   CAGGAAGCAAGGCGTAGAGCTTTACACCAGGATTCCTTATCCCAAGATGTTTCA
 
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JMFF045F06+           AGATATATGTAAAATGTTCTGCTTCCTTTGTATATTGCTGATGATTTGCTTTCTACCTTT
JMSF037G17+           AGATATATGTAAAATGTTCTGCTTCCTTTGTATATTGCTGATGATTTGCTTTCTACCTTT
JMFF050B04+                                                  GATGATTTGCTTTCTACCTTA
JMFS169C01+           AGATATATGTANAATGTTCTGCTTCCTTTGTATATGNCTGATGATTGNCTTTCTACCTTT
JMFF050K06+           AGATATATGTAAAATGTTCTGCTTCCTTTGTATATTGCTGATGATTTGCTTTCTACCTTT
JMFF046A04+           AGATATATGTAAAATGTTCTGCTTCCTTTGTATATTGCTGATGATTTGCTTTCTACCTTT
JMFF012M16+                                               GCTGATGATTTGCTTTCTACCTTT
JMSF025P13+           AGATATATGTAAAATGTTCTGCTTCCTTTGTATATTGCTGATGATTTGCTTTCTACCTTT
                      ____________________________________________________________
consensus             AGATATATGTAAAATGTTCTGCTTCCTTTGTATATTGCTGATGATTTGCTTTCTACCTTT
 
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JMFF045F06+           ATCGGGTACCTTTTTGCCCATTTTCTTGAGGACAAGCCTGTTGCAGAAA-CGCTGCAATT
JMSF037G17+           ATCGGGTACCTTTTTGCCCATTTTCTTGAGGACAAGCCTGTTGCAGAAACCGCTGCAATT
JMFF050B04+           NTCGGGTACCTTTTGNCCCATTTTCTGNAGGACAAGCCTGTTGCAGAAACCGCTGCAATT
JMFS169C01+           ATCGGGTACCTTTTTGCCCATTTTCTTGAGGACAAGCCTGTTGCAGAAACCGCTGCAATT
JMFF050K06+           ATCGGGTACCTTTTTGCCCATTTTCTTGAGGACAAGCCTGTTGCAGAAACCGCTGCAATT
JMFF046A04+           ATCGGGTACCTTTTTGCCCATNTTCTGNAGGACAAGCCTGTTGCAGAAACCGCTGCAATT
JMFF012M16+           ATCGGGTACCTTTTTGCCCATTTTCTTGAGGACAAGCCTGTTGCAGAAACCGCTGCAATT
JMSF025P13+           ATCGGGTACCTTTTTGCCCATTTTCTTGAGGACAAGCCTGTTGCAGAAACCGCTGCAATT
                      ____________________________________________________________
consensus             ATCGGGTACCTTTTTGCCCATTTTCTTGAGGACAAGCCTGTTGCAGAAACCGCTGCAATT
 
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JMFF045F06+           GTACAACCTCTGAGTTGAATTTCAGTGTTGGAACCATCAGATTCTAATAGAAACAGAGAA
JMSF037G17+           GTACAACCTCTGAGTTGAATTTCAGTGTTGGAACCATCAGATTCTAATAGAAACAGAGAA
JMFF050B04+           GTACAACCTCTGAGTTGAATTTCAGTGTTGGAACCATCAGATTCTAATAGAAACAGAGAA
JMFS169C01+           GTACAACCTCTGAGTTGAATTTCAGTGTTGGAACCATCAGATTCTAATAGAAACAGAGAA
JMFF050K06+           GTACAACCTCTGAGTTGAATTTCAGTGTTGGAACCATCAGATTCTAATAGAAACAGAGAA
JMFF046A04+           GTACAACCTCTGAGTTGAATTTCAGTGTTGGAACCATCAGATTCTAATAGAAACAGAGAA
JMFF012M16+           GTACAACCTCTGAGTTGAATTTCAGTGTTGGAACCATCAGATTCTAATAGAAACAGAGAA
JMSF025P13+           GTACAACCTCTGAGTTGAATTTCAGTGTTGGAACCATCAGATTCTAATAGAAACAGAGAA
                      ____________________________________________________________
consensus             GTACAACCTCTGAGTTGAATTTCAGTGTTGGAACCATCAGATTCTAATAGAAACAGAGAA
 
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JMFF045F06+           TGATCCTTTATTTTTGCATATTTTTGGATAGGTGAAACCTCCAAGACCTCTTTCTTGCTT
JMSF037G17+           TGATCCTTTATTTTTGCATATTTT-GGATAGGTGAAACCTCCAAGACCTCTTTCTTGCTT
JMFF050B04+           TGATCCTTTATTTTTGCATATTTTTGGATAGGTGAAACCTCCAAGACCTCTTTCTTGCTT
JMFS169C01+           TGATCCTTTATTTTTGCATATTTTTGGATAGGTGAAACCTCCAAGACCTCTTTCTTGCTT
JMFF050K06+           TGATCCTTTATTTTTGCATATTTTTGGATAGGTGAAACCTCCAAGACCTCTTTCTTGCTT
JMFF046A04+           TGATCCTTTATTTTTGCATATTTTNGGATAGGTGAAACCTCCAAGACCTCTTTCTTGCTT
JMFF012M16+           TGATCCTTTATTTTTGCATATTTTTGGATAGGTGAAACCTCCAAGACCTCTTTCTTGCTT
JMFF025C13+                                                 CTCCAAGACCTCTTTCTTGCTT
JMSF025P13+           TGATCCTTTATTTTTGCATATTTTTGGATAGGTGAAACCTCCAAGACCTCTTTCTTGCTT
                      ____________________________________________________________
consensus             TGATCCTTTATTTTTGCATATTTTTGGATAGGTGAAACCTCCAAGACCTCTTTCTTGCTT
 
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JMFF045F06+           TTTTTCTGTCCCAACGCTTTGTCCACAGGAGCTCTTGGAATCTTTTCTAAATCTAGAATC
JMSF037G17+           TTTTTCTGTCCCAACGCTTTGTCCACAGGAGCTCTTGGAATCTTTTCTAAATCTAGAATC
JMFF050B04+           TTTTTCTGTCCCAACGCTTTGTCCACAGGAGCTCTTGGAATCTTTTCTAAATCTAGAATC
JMFS169C01+           TTTTTCTGTCCCAACGCTTTGTCCACAGGAGCTCTTGGAATCTTTTCTAAATCTAGAATC
JMFF050K06+           TTTTTCTGTCCCAACGCTTTGTCCACAGGAGCTCTTGGAATCTTTTCTAAATCTAGAATC
JMFF046A04+           TTTTTCTGTCCCAACGCTTTGTCCACAGGAGCTCTTGGAATCTTTTCTAAATCTAGAATC
JMFF012M16+           TTTTTCTGTCCCAACGCTTTGTCCACAGGAGCTCTTGGAATCTTTTCTAAATCTAGAATC
JMFF025C13+           TTTTTCTGTCCCAACGCTTTGTCCACAGGAGCTCTTGGAATCTTTTCTAAATCTAGAATC
JMSF025P13+           TTTTTCTGTCCCAACGCTTTGTCCACAGGAGCTCTTGGAATCTTTTCTAAATCTAGAATC
                      ____________________________________________________________
consensus             TTTTTCTGTCCCAACGCTTTGTCCACAGGAGCTCTTGGAATCTTTTCTAAATCTAGAATC
 
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JMFF045F06+           CACACTATGCCCTGCTTGTTGTAGTATGAGGGATCGAGGCCCGGCGGGGAAGATAGTTCT
JMSF037G17+           CACACTATGCCCTGCTTGTTGTAGTATGAGGGATCGAGGCCCGGCGGGGAAGATAGTTCT
JMFF050B04+           CACACTATGCCCTGCTTGTTGTAGTATGAGGGATCGAGGCCCGGCGGGGAAGATAGTTCT
JMFS169C01+           CACACTATGCCCTGCTTGTTGTAGTATGAGGGATCGAGGCCCGGCGGGGAAGATAGTTCT
JMFF050K06+           CACACTATGCCCTGCTTGTTGTAGTATGAGGGATCGAGGCCCGGCGGGGAAGATAGTTCT
JMFF046A04+           CACACTATGCCCTGCTTGTTGTAGTATGAGGGATCGAGGCCCGGCGGGGAAGATAGTTCT
JMFF012M16+           CACACTATGCCCTGCTTGTTGTAGTATGAGGGATCGAGGCCCGGCGGGGAAGATAGTTCT
JMFF025C13+           CACACTATGCCCTGCTTGTTGTAGTATGAGGGATCGAGGCCCGGCGGGGAAGATAGTTCT
JMSF025P13+           CACACTATGCCCTGCTTGTTGTAGTATGAGGGATCGAGGCCCGGCGGGGAAGATAGTTCT
                      ____________________________________________________________
consensus             CACACTATGCCCTGCTTGTTGTAGTATGAGGGATCGAGGCCCGGCGGGGAAGATAGTTCT
 
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JMFF045F06+           GCGGAGACCTTGGCTTTATCTACTTCTCGGGAAAGTCTTCGACTCAACCACCGTATAAGA
JMSF037G17+           GCGGAGACCTTGGCTTTATCTACTTCTCGGGAAAGTCTTCGACTCAACCACCGTATAAGA
JMFF050B04+           GCGGAGACCTTGGCTTTATCTACTTCTCGGGAAAGTCTTCGACTCAACCACCGTATAAGA
JMFS169C01+           GCGGAGACCTTGGCTTTATCTACTTCTCGGGAAAGTCTTCGACTCAACCACCGTATAAGA
JMFF050K06+           GCGGAGACCTTGGCTTTATCTACTTCTCGGGAAAGTCTTCGACTCAACCACCGTATAAGA
JMFF046A04+           GCGGAGACCTTGGCTTTATCTACTTCTCGGGAAAGTCTTCGACTCAACCACCGTATAAGA
JMFF012M16+           GCGGAGACCTTGGCTTTATCTACTTCTCGGGAAAGTCTTCGACTCAACCACCGTATAAGA
JMFF025C13+           GCGGAGACCTTGGCTTTATCTACTTCTCGGGAAAGTCTTCGACTCAACCACCGTATAAGA
JMSF025P13+           GCGGAGACCTTGGCTTTATCTACTTCTCGGGAAAGTCTTCGACTCAACCACCGTATAAGA
                      ____________________________________________________________
consensus             GCGGAGACCTTGGCTTTATCTACTTCTCGGGAAAGTCTTCGACTCAACCACCGTATAAGA
 
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JMFF045F06+           AAGACGGCCGCCGCAGCTTCAACTCCGACGACCGTCAGCGCCCCAAGAATAAATACAAGC
JMSF037G17+           AAGACGGCCGCCGCAGCTTCAACTCCGACGACCGTCAGCGCCCCAAGAATAAATACAAGC
JMFF050B04+           AAGACGGCCGCCGCAGCTTCAACTCCGACGACCGTCAGCGCCCCAAGAATAAATACAAGC
JMFS169C01+           AAGACGGCCGCCGCAGCTTCAACTCCGACGACCGTCAGCGCCCCAAGAATAAATACAAGC
JMFF050K06+           AAGACGGCCGCCGCAGCTTCAACTCCGACGACCGTCAGCGCCCCAAGAATAAATACAAGC
JMFF046A04+           AAGACGGCCGCCGCAGCTTCAACTCCGACGACCGTCAGCGCCCCAAGAATAAATACAAGC
JMFF012M16+           AAGACGGCCGCCGCAGCTTCAACTCCGACGACCGTCAGCGCCCCAAGAATAAATACAAGC
JMFF025C13+           AAGACGGCCGCCGCAGCTTCAACTCCGACGACCGTCAGCGCCCCAAGAATAAATACAAGC
JMSF025P13+           AAGACGGCCGCCGCAGCTTCAACTCCGACGACCGTCAGCGCCCCAAGAATAAATACAAGC
                      ____________________________________________________________
consensus             AAGACGGCCGCCGCAGCTTCAACTCCGACGACCGTCAGCGCCCCAAGAATAAATACAAGC
 
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JMFF045F06+           ACGAATTGCCACATCCTTTCTACTCCCGCCGTCACAAATTATCAGAACCCATTTGGAAAC
JMSF037G17+           ACGAATTGCCACATCCTTTCTACTCCCGCCGTCACAAATTATCAGAACCCATTTGGAAAC
JMFF050B04+           ACGAATTGCCACATCCTTTCTACTCCCGCCGTCACAAATTATCAGAACCCATTTGGAAAC
JMFS169C01+           ACGAATTGCCACATCCTTTCTACTCCCGCCGTCACAAATTATCAGAACCCATTTGGAAAC
JMFF050K06+           ACGAATTGCCACATCCTTTCTACTCCCGCCGTCACAAATTATCAGAACCCA-TTGGAAAC
JMFF046A04+           ACGAATTGCCACATCCTTTCTACTCCCGCCGTCACAAATTATCAGAACCCA-TTGGAAAC
JMFF012M16+           ACGAATTGCCACATCCTTTCTACTCCCGCCGTCACAAATTATCAGAACCCATTTGGAAAC
JMFF025C13+           ACGAATTGCCACATCCTTTCTACTCCCGCCGTCACAAATTATCAGAACCCATTTGGAAAC
JMSF025P13+           ACGAATTGCCACATCCTTTCTACTCCCGCCGTCACAAATTATCAGAACCCATTTGGAAAC
                      ____________________________________________________________
consensus             ACGAATTGCCACATCCTTTCTACTCCCGCCGTCACAAATTATCAGAACCCATTTGGAAAC
 
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JMFF045F06+           ATTACATGAATTTCACCAGCCGATAATCATTTT                           
JMSF037G17+           ATTACATGAATTTCACCAGCCGATAATCGTTTTGACAACAGTATCTGATTCAACTCATTC
JMFF050B04+           ATTACATGAATTTCACCAGCCGATAATCGTTTTGACAACAGTATCTGATTCAACTCATTC
JMFS169C01+           ATTACATGAATTTCACCAGCCGATAATCGTTTTGACAACAGTATCTGA            
JMFF050K06+           ATTACATGAATTTCACCAGCCGATAATCGTTTT                           
JMFF046A04+           ATTACATGAATTTC                                              
JMFF012M16+           ATTACATGAATTTC                                              
JMFF025C13+           ATTACATGAATTTCACCAGCCGATAATCGTTTTGACAACAGTATCTGATTCAACTCATTC
JMSF025P13+           ATTACATGAATTTCACCAGCCGATAATCGTTTTGACAACAGTATCTGATTCAACTCATTC
                      ____________________________________________________________
consensus             ATTACATGAATTTCACCAGCCGATAATCGTTTTGACAACAGTATCTGATTCAACTCATTC
 
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JMSF037G17+           AAGCCTTCAAC                                                 
JMFF050B04+           AAGCCTTCAACTGCTGAGTTTCACACGAGCAGGTGAACAAATGAAGCTTCCGGTAAAC  
JMFF025C13+           AAGCCTTCAACTGCTGAGTTTCACACGAGCAGGTGAACAAATGAAGCTTCCGGTAAAC  
JMSF025P13+           AAGCCTTCAACTGCTGAGTTTCACACGAGCAGGTGAACAAATGAAGCTTCCGGTAAACCC
                      ____________________________________________________________
consensus             AAGCCTTCAACTGCTGAGTTTCACACGAGCAGGTGAACAAATGAAGCTTCCGGTAAACCC