clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFS134B12 | Sequence | 641 | 013381 (3) | ref|XP_010275998.1| | 3e-60 | PREDICTED: uncharacterized protein LOC104610875 isoform X1 [Nelumbo nucifera] | |||||
JMSF025O12 | Sequence | 684 | 013381 (3) | ref|XP_010101465.1| | 1e-49 | hypothetical protein L484_012890 [Morus notabilis] gb|EXB88448.1| hypothetical p | 786 | 007124 (2) | ref|XP_009793882.1| | 322 | PREDICTED: uncharacterized protein LOC104240702 [Nicotiana sylvestris] |
JMSF026C22 | Sequence | 656 | 013381 (3) | ref|XP_010101465.1| | 7e-55 | hypothetical protein L484_012890 [Morus notabilis] gb|EXB88448.1| hypothetical p | 721 | 007124 (2) | ref|XP_009793882.1| | 293 | PREDICTED: uncharacterized protein LOC104240702 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMFS134B12+ ACATG
____________________________________________________________
consensus ACATG
. : . : . : . : . : . :
JMFS134B12+ TTGGGCTGGACTTGTCTGTAGGCCTCACAAAACACCTCAGGCAAACGGGCAGAGAAGTGC
JMSF026C22+ GTAGGCCTCACAAAACACNTCAGGCAAACGGGCAGAGAAGTGC
JMSF025O12+ CAGGCAAACGGGCAGAGAAGTGC
____________________________________________________________
consensus TTGGGCTGGACTTGTCTGTAGGCCTCACAAAACACCTCAGGCAAACGGGCAGAGAAGTGC
. : . : . : . : . : . :
JMFS134B12+ CTTATATATTCCCTGCCTATATTCTTTACAATACTGTCAAGAAGGTAAAGAGATGGCAAT
JMSF026C22+ CTTATATATTCCCTGCCTATATTCTTTACAATACTGTCAAGAAGGTAAAGAGATGGCAAT
JMSF025O12+ CTTATATATTCCCTGCCTATATTCTTTACAATACTGTCAAGAAGGTAAAGAGATGGCAAT
____________________________________________________________
consensus CTTATATATTCCCTGCCTATATTCTTTACAATACTGTCAAGAAGGTAAAGAGATGGCAAT
. : . : . : . : . : . :
JMFS134B12+ TTATGCTCAACTGGGGCCTCCAGAATACGAGCACAGATTGCATTCGCAATGCCCTGGCCG
JMSF026C22+ TTATGCTCAACTGGGGCCTCCAGAATACGAGCACAGATTGCATTCGCAATGCCCTGGCCG
JMSF025O12+ TTATGCTCAACTGGGGCCTCCAGAATACGAGCACAGATTGCATTCGCAATGCCCTGGCCG
____________________________________________________________
consensus TTATGCTCAACTGGGGCCTCCAGAATACGAGCACAGATTGCATTCGCAATGCCCTGGCCG
. : . : . : . : . : . :
JMFS134B12+ TGCTCTCTCTGCTCCCCAGCAATTATGGTTAGTTCAGTGATGATAGGCTTCGAATTGAAA
JMSF026C22+ TGCTCTCTCTGCTCCCCAGCAATTATGGTTAGTTCAGTGATGATAGGCTTCGAATTGAAA
JMSF025O12+ TGCTCTCTCTGCTCCCCAGCAATTATGGTTAGTTCAGTGATGATAGGCTTCGAATTGAAA
____________________________________________________________
consensus TGCTCTCTCTGCTCCCCAGCAATTATGGTTAGTTCAGTGATGATAGGCTTCGAATTGAAA
. : . : . : . : . : . :
JMFS134B12+ GTTAATTCCGACAACACAATCTCATAAAGCCTCACAACCATATCCATAGTGGAAGGCGAA
JMSF026C22+ GTTAATTCCGACAACACAATCTCATAAAGCCTCACAACCATATCCATAGTGGAAGGCGAA
JMSF025O12+ GTTAATTCCGACAACACAATCTCATAAAGCCTCACAACCATATCCATAGTGGAAGGCGAA
____________________________________________________________
consensus GTTAATTCCGACAACACAATCTCATAAAGCCTCACAACCATATCCATAGTGGAAGGCGAA
. : . : . : . : . : . :
JMFS134B12+ ATACCACCATCTTCCAAAGAAACCCTAACCTCCTCATCTGGCTCCTTCAACATGGTCTTA
JMSF026C22+ ATACCACCATCTTCCAAAGAAACCCTAACCTCCTCATCTGGCTCCTTCAACATGGTCTTA
JMSF025O12+ ATACCACCATCTTCCAAAGAAACCCTAACCTCCTCATCTGGCTCCTTCAACATGGTCTTA
____________________________________________________________
consensus ATACCACCATCTTCCAAAGAAACCCTAACCTCCTCATCTGGCTCCTTCAACATGGTCTTA
. : . : . : . : . : . :
JMFS134B12+ AACCGGTCGAGTATTGAGGTCGGCGCGGACTTTGAAGCTCCCGCAGATGTATCGTTTGAC
JMSF026C22+ AACCGGTCGAGTATTGAGGTCGGCGCGGACTTTGAAGCTCCCGCAGATGTATCGTTTGAC
JMSF025O12+ AACCGGTCGAGTATTGAGGTCGGCGCGGACTTTGAAGCTCCCGCAGATGTATCGTTTGAC
____________________________________________________________
consensus AACCGGTCGAGTATTGAGGTCGGCGCGGACTTTGAAGCTCCCGCAGATGTATCGTTTGAC
. : . : . : . : . : . :
JMFS134B12+ ATTTGCTTAGAGCTAGCGAAGCTGCCTCCAATGGCCGCTCTAGGGTTCTGCAGTCTTGGT
JMSF026C22+ ATTTGCTTAGAGCTAGCGAAGCTGCCTCCAATGGCCGCTCTAGGGTTCTGCAGTCTTGGT
JMSF025O12+ ATTTGCTTAGAGCTAGCGAAGCTGCCTCCAATGGCCGCTCTAGGGTTCTGCAGTCTTGGT
____________________________________________________________
consensus ATTTGCTTAGAGCTAGCGAAGCTGCCTCCAATGGCCGCTCTAGGGTTCTGCAGTCTTGGT
. : . : . : . : . : . :
JMFS134B12+ TCGTTCATTGAGTCAATAGGCCAAACAGATAATACAGAAAAACGAATAGAAGATACTCCG
JMSF026C22+ TCGTTCATTGAGTCAATAGGCCAAACAGATAATACAGAAAAACGAATAGAAGATACTCCG
JMSF025O12+ TCGTTCATTGAGTCAATAGGCCAAACAGATAATACAGAAAAACGAATAGAAGATACTCCG
____________________________________________________________
consensus TCGTTCATTGAGTCAATAGGCCAAACAGATAATACAGAAAAACGAATAGAAGATACTCCG
. : . : . : . : . : . :
JMFS134B12+ CAACCGCAAGTTCAGAGCTTCGACTGAGTAATGGTTAGGATTTTGAACCACCGTGCACGG
JMSF026C22+ CAACCGCAAGTTCAGAGCTTCGACTGAGTAATGGTTAGGATTTTGAACCACCGTGCACGG
JMSF025O12+ CAACCGCAAGTTCAGAGCTTCGACTGAGTAATGGTTAGGATTTTGAACCACCGTGCACGG
____________________________________________________________
consensus CAACCGCAAGTTCAGAGCTTCGACTGAGTAATGGTTAGGATTTTGAACCACCGTGCACGG
. : . : . : . : . : . :
JMFS134B12+ TGGCGATAGCGGAGGAGAGATAAATGGCCGTTACAG
JMSF026C22+ TGGCGATAGCGGAGGAGAGATAAATGGCCGTTACAGCCCATCCGATTCAGAGAGGGGTTT
JMSF025O12+ TGGCGATAGCGGAGGAGAGATAAATGGCCGTTACAGCCCATCCGATTCAGAGAGGGGTTT
____________________________________________________________
consensus TGGCGATAGCGGAGGAGAGATAAATGGCCGTTACAGCCCATCCGATTCAGAGAGGGGTTT
. : . : . : . : . : . :
JMSF026C22+ AGAGTA
JMSF025O12+ AGAGTATAGACTATCCGACGAATGGATTGGCAAAGCACAAAGGCGGAAAATTGTGGGATC
____________________________________________________________
consensus AGAGTATAGACTATCCGACGAATGGATTGGCAAAGCACAAAGGCGGAAAATTGTGGGATC