Contig 013378:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF020I05Sequence686013378 (4)gb|EYU34698.1|1e-83hypothetical protein MIMGU_mgv1a015704mg [Erythranthe guttata]776013378 (4)gb|EYU34698.1|3e-83hypothetical protein MIMGU_mgv1a015704mg [Erythranthe guttata]
JMSF025E15Sequence674013378 (4)gb|AGK06902.1|2e-76chloroplast ferredoxin-thioredoxin reductase catalytic chain [Nicotiana bentham773013378 (4)gb|EYU34698.1|9e-83hypothetical protein MIMGU_mgv1a015704mg [Erythranthe guttata]

Alignment

This contig is upended


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rJMSF020I05-                                                  GTGTGATTTCCAGAGCTATA
                      ____________________________________________________________
consensus                                                     GTGTGATTTCCAGAGCTATA
 
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rJMSF020I05-          GTACAAAGCTTGGGTTGGAGAAATGAAAAAAATAACGATGTGTTAACAAGCAAAACTGCT
                      ____________________________________________________________
consensus             GTACAAAGCTTGGGTTGGAGAAATGAAAAAAATAACGATGTGTTAACAAGCAAAACTGCT
 
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rJMSF020I05-          CTTTTCCTTTCTGTGCCTGTGTACGTTTAACAACTTCAGCACATACATCAATGAAATGAA
                      ____________________________________________________________
consensus             CTTTTCCTTTCTGTGCCTGTGTACGTTTAACAACTTCAGCACATACATCAATGAAATGAA
 
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rJMSF020I05-          CAAAAGTCGTTAACAACTCAGCATACACATCTACATATGGTCATTTTAAAGGAATGAATA
                      ____________________________________________________________
consensus             CAAAAGTCGTTAACAACTCAGCATACACATCTACATATGGTCATTTTAAAGGAATGAATA
 
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JMSF020I05+                         ATCACAAATTTGAAGTTGTTTCTCTGATCTCTTCCAAAGAAATAGT
rJMSF020I05-          CAAGATGATGAAGCATCACAAATTTGAAGTTGTTTCTCTGATCTCTTCCAAAGAAATAGT
rJMSF025E15-                        ATCACAAATTTGAAGTTGTTTCTCTGATCTCTTCCAAAGAAATAGT
JMSF025E15+                                                         TCCAAAGAAATAGT
                      ____________________________________________________________
consensus             CAAGATGATGAAGCATCACAAATTTGAAGTTGTTTCTCTGATCTCTTCCAAAGAAATAGT
 
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JMSF020I05+           CTGATCTTGCCCAGCAAAGTCATTATCAGGGGTGAGAAAGAGCATGCAGTGACACTCCTT
rJMSF020I05-          CTGATCTTGCCCAGCAAAGTCATTATCAGGGGTGAGAAAGAGCATGCAGTGACACTCCTT
rJMSF025E15-          CTGATCTTGCCCAGCAAAGTCATTATCAGGGGTGAGAAAGAGCATGCAGTGACACTCCTT
JMSF025E15+           CTGATCTTGCCCAGCAAAGTCATTATCAGGGGTGAGAAAGAGCATGCAGTGACACTCCTT
                      ____________________________________________________________
consensus             CTGATCTTGCCCAGCAAAGTCATTATCAGGGGTGAGAAAGAGCATGCAGTGACACTCCTT
 
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JMSF020I05+           CCTCTCTCTCATAGGTACACAGGGGCAGTTCCAGAAACCCTGTTGCGCTTCTGCAGGTTT
rJMSF020I05-          CCTCTCTCTCATAGGTACACAGGGGCAGTTCCAGAAACCCTGTTGCGCTTCTGCAGGTTT
rJMSF025E15-          CCTCTCTCTCATAGGTACACAGGGGCAGTTCCAGAAACCCTGTTGCGCTTCTGCAGGTTT
JMSF025E15+           CCTCTCTCTCATAGGTACACAGGGGCAGTTCCAGAAACCCTGTTGCGCTTCTGCAGGTTT
                      ____________________________________________________________
consensus             CCTCTCTCTCATAGGTACACAGGGGCAGTTCCAGAAACCCTGTTGCGCTTCTGCAGGTTT
 
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JMSF020I05+           ATCATCATAGTGCCTACAGGGACAGAGCGGTGCACCCAATGAATCCTTGTGTTCGGCCAG
rJMSF020I05-          ATCATCATAGTGCCTACAGGGACAGAGCGGTGCACCCAATGAATCCTTGTGTTCGGCCAG
rJMSF025E15-          ATCATCATAGTGCCTACAGGGACAGAGCGGTGCACCCAATGAATCCTTGTGTTCGGCCAG
JMSF025E15+           ATCATCATAGTGCCTACAGGGACAGAGCGGTGCACCCAATGAATCCTTGTGTTCGGCCAG
                      ____________________________________________________________
consensus             ATCATCATAGTGCCTACAGGGACAGAGCGGTGCACCCAATGAATCCTTGTGTTCGGCCAG
 
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JMSF020I05+           TCCCTTAATGACAACAGCAGTGACCCCTTTGTCCATACAGAAGTAGGTTCCAGACCTCCG
rJMSF020I05-          TCCCTTAATGACAACAGCAGTGACCCCTTTGTCCATACAGAAGTAGGTTCCAGACCTCCG
rJMSF025E15-          TCCCTTAATGACAACAGCAGTGACCCCTTTGTCCATACAGAAGTAGGTTCCAGACTTCCG
JMSF025E15+           TCCCTTAATGACAACAGCAGTGACCCCTTTGTCCATACAGAAGTAGGTTCCAGACTTCCG
                      ____________________________________________________________
consensus             TCCCTTAATGACAACAGCAGTGACCCCTTTGTCCATACAGAAGTAGGTTCCAGACTTCCG
 
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JMSF020I05+           AGCGTACTGCTCTGAGAACTTCCTCATTATCTCAATAGATTGCTCAGATGGTTCACGTTC
rJMSF020I05-          AGCGTACTGCTCTGAGAACTTCCTCATTATCTCAATAGATTGCTCAGATGGTTCACGTTC
rJMSF025E15-          AGCGTACTGCTCTGAGAACTTCCTCATTATCTCAATAGATTGCTCAGATGGTTCACGTTC
JMSF025E15+           AGCGTACTGCTCTGAGAACTTCCTCATTATCTCAATAGATTGCTCAGATGGTTCACGTTC
                      ____________________________________________________________
consensus             AGCGTACTGCTCTGAGAACTTCCTCATTATCTCAATAGATTGCTCAGATGGTTCACGTTC
 
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JMSF020I05+           AACTTTAGCGAATACGACATGGCGGCGCTGAGCGTAAGAAGGCCGGCTACTGGGAGTAGC
rJMSF020I05-          AACTTTAGCGAATACGACATGGCGGCGCTGAGCGTAAGAAGGCCGGCTACTGGGAGTAGC
rJMSF025E15-          AACTTTAGCGAATACGACATGGCGGCGCTGAGCGTAAGAAGGCCGGCTACTGGGAGTAGC
JMSF025E15+           AACTTTAGCGAATACGACATGGCGGCGCTGAGCGTAAGAAGGCCGGCTACTGGGAGTAGC
                      ____________________________________________________________
consensus             AACTTTAGCGAATACGACATGGCGGCGCTGAGCGTAAGAAGGCCGGCTACTGGGAGTAGC
 
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JMSF020I05+           AGCAAGGGAGGGAATGCCAAATCCAAGATTGTAGGGAATCGACGCCTGAAGAGCTCTCAT
rJMSF020I05-          AGCAAGGGAGGGAATGCCAAATCCAAGATTGTAGGGAATCGACGCCTGAAGAGCTCTCAT
rJMSF025E15-          AGCAAGGGAGGGAATGCCAAATCCAAGATTGTAGGGAATCGACGCCTGAAGAGCTCTCAT
JMSF025E15+           AGCAAGGGAGGGAATGCCAAATCCAAGATTGTAGGGAATCGACGCCTGAAGAGCTCTCAT
                      ____________________________________________________________
consensus             AGCAAGGGAGGGAATGCCAAATCCAAGATTGTAGGGAATCGACGCCTGAAGAGCTCTCAT
 
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JMSF020I05+           GGCGGTAAGTAATGTCTAAGAAACGGCGGGTTTACGCCACAGTTGAACAGAGAAATATCT
rJMSF020I05-          GGCGGTAAGTAATGTCTAAGAAACGGCGGGTTTACGCCACAGTTGAACAGAGAAATATCT
rJMSF025E15-          GGCGGTAAGTAATGTCTAAGAAACGGCGGGTTTACGCCACAGTTGAACAGAGAAATATCT
JMSF025E15+           GGCGGTAAGTAATGTCTAAGAAACGGCGGGTTTACGCCACAGTTGAACAGAGAAATATCT
                      ____________________________________________________________
consensus             GGCGGTAAGTAATGTCTAAGAAACGGCGGGTTTACGCCACAGTTGAACAGAGAAATATCT
 
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JMSF020I05+           GTGGTAAGTATTGCAGTTGCTCAATAGTCGTCTTC                         
rJMSF020I05-          GTGGTAAGTATTGCAGTTGCTCAATAGTCGTCTTC                         
rJMSF025E15-          GTGGTAAGTATTGCAGTTGCTCAATAGTCGTCTTCGTTGAAATGCATAACTTCTAGTTAT
JMSF025E15+           GTGGTAAGTATTGCAGTTGCTCAATAGTCGTCTTCGTTGAAATGCATAACTTCTAGTTAT
                      ____________________________________________________________
consensus             GTGGTAAGTATTGCAGTTGCTCAATAGTCGTCTTCGTTGAAATGCATAACTTCTAGTTAT
 
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rJMSF025E15-          TAAATACACTCAGATGCCGCGAACCGGAAAAATCGGGATTGGAGGAAACAGATTTCAGAT
JMSF025E15+           TAAATACACTCAGATGCCGCGAACCGGAAAAATCGGGATTGGAGGAAACAGATTTCAGAT
                      ____________________________________________________________
consensus             TAAATACACTCAGATGCCGCGAACCGGAAAAATCGGGATTGGAGGAAACAGATTTCAGAT
 
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rJMSF025E15-          GGAAAATGATCTTCAG                                            
JMSF025E15+           GGAAAATGATCTTCAGAAGCGTGGGCGCCACACGTTGAAATATCGGGTCGGAGAAGAATC
                      ____________________________________________________________
consensus             GGAAAATGATCTTCAGAAGCGTGGGCGCCACACGTTGAAATATCGGGTCGGAGAAGAATC