Contig 013369:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010H24Sequence537013369 (10)emb|CDX83957.1|3e-55BnaC08g16880D [Brassica napus]693011131 (9)gb|KDO36650.1|1e-75hypothetical protein CISIN_1g028965mg [Citrus sinensis]
JMFF019D09Sequence542013369 (10)emb|CDX83957.1|2e-54BnaC08g16880D [Brassica napus]715011131 (9)ref|XP_009354238.1|1e-77PREDICTED: probable serine incorporator [Pyrus x bretschneideri] ref|XP_00935423
JMFF019N22Sequence539013369 (10)ref|XP_010532058.1|2e-73PREDICTED: serine incorporator 3 [Tarenaya hassleriana] ref|XP_010532059.1| PRED722011131 (9)gb|KDO36650.1|2e-75hypothetical protein CISIN_1g028965mg [Citrus sinensis]
JMFF020M04Sequence545013369 (10)ref|XP_010532058.1|5e-74PREDICTED: serine incorporator 3 [Tarenaya hassleriana] ref|XP_010532059.1| PRED691011131 (9)gb|KDO36650.1|1e-75hypothetical protein CISIN_1g028965mg [Citrus sinensis]
JMFF022B03Sequence501013369 (10)ref|XP_010532058.1|3e-74PREDICTED: serine incorporator 3 [Tarenaya hassleriana] ref|XP_010532059.1| PRED701011131 (9)ref|XP_011073234.1|2e-79PREDICTED: probable serine incorporator [Sesamum indicum] ref|XP_011073235.1| PR
JMFF039I24Sequence580013369 (10)ref|XP_011034606.1|8e-81PREDICTED: probable serine incorporator [Populus euphratica] ref|XP_011034607.1|741011131 (9)ref|XP_011073234.1|3e-79PREDICTED: probable serine incorporator [Sesamum indicum] ref|XP_011073235.1| PR
JMFS027A07Sequence595013369 (10)gb|KDP41926.1|1e-77hypothetical protein JCGZ_26944 [Jatropha curcas]
JMSF023I12Sequence674013369 (10)gb|KDP41926.1|2e-80hypothetical protein JCGZ_26944 [Jatropha curcas]740011131 (9)ref|XP_011073234.1|3e-79PREDICTED: probable serine incorporator [Sesamum indicum] ref|XP_011073235.1| PR
JMSF024M20Sequence636013369 (10)gb|KDP41926.1|6e-84hypothetical protein JCGZ_26944 [Jatropha curcas]740011131 (9)ref|XP_011073234.1|4e-95PREDICTED: probable serine incorporator [Sesamum indicum] ref|XP_011073235.1| PR
JMSF044A23Sequence728013369 (10)gb|KDP41926.1|2e-108hypothetical protein JCGZ_26944 [Jatropha curcas]738011131 (9)gb|KDO36651.1|2e-64hypothetical protein CISIN_1g028965mg [Citrus sinensis]

Alignment

This contig is upended


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JMSF044A23+                                                    ATNTTGTCCAGATGGAGCA
                      ____________________________________________________________
consensus                                                      ATNTTGTCCAGATGGAGCA
 
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JMSF044A23+           AAGAAATGAAAAAGAACTCCAGTGATGGCAAAAGTTGCCACATAACATACAAGTGAAACA
                      ____________________________________________________________
consensus             AAGAAATGAAAAAGAACTCCAGTGATGGCAAAAGTTGCCACATAACATACAAGTGAAACA
 
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JMSF044A23+           ACAAGCAAGGCCACATACCAGAACTGCTCATCATATCCAACCCATTTGTCATTCCATCCA
JMFS027A07+                                                              TTCCATCCA
JMSF024M20+                                             ATCCAACCCATTTGTCATTCCATCCA
JMSF023I12+                                                              TTCCATCCA
                      ____________________________________________________________
consensus             ACAAGCAAGGCCACATACCAGAACTGCTCATCATATCCAACCCATTTGTCATTCCATCCA
 
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JMSF044A23+           TGGACAAAGTCCAACAAAAGGACAACTTGAACAAGAAGAAACAATCCTGAACCAAACTTC
JMFS027A07+           TGGACAAAGTCCAACAAAAGGACAACTTGAACAAGAAGAAACAATCCTGAACCAAACTTC
JMSF024M20+           TGGACAAAGTCCAACAAAAGGACAACTTGAACAAGAAGAAACAATCCTGAACCAAACTTC
JMFF039I24+                                        AACAAGAAGAAACAATCCTGAACCAAACTTC
JMSF023I12+           TGGACAAAGTCCAACAAAAGGACAACTTGAACAAGAAGAAACAATCCTGAACCAAACTTC
                      ____________________________________________________________
consensus             TGGACAAAGTCCAACAAAAGGACAACTTGAACAAGAAGAAACAATCCTGAACCAAACTTC
 
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JMSF044A23+           GAAGTTGACTCATAAAAGCTGATGAGCTCATTTGGAACAAAAAACATAAATATTACTAAA
JMFS027A07+           GAAGTTGACTCATAAAAGCTGATGAGCTCATATGGAACAAAAAACATAAATATTACTAAA
JMSF024M20+           GAAGTTGACTCATAAAAGCTGATGAGCTCATTTGGAACAAAAAACATAAATATTACTAAA
JMFF039I24+           GAAGTTGACTCATAAAAGCTGATGAGCTCATTTGGAACAAAAAACATAAATATTACTAAA
JMFF019N22+                 GACTCATAAAAGCTGATGAGCTCATTTGGAACAAAAAACATAAATATTACTAAA
JMFF019D09+                 GACTCATAAAAGCTGATGAGCTCATTTGGAACAAAAAACATAAATATTACTAAA
JMFF020M04+               TTGACTCATAAAAGCTGATGAGCTCATTTGGAACAAAAAACATAAATATTACTAAA
JMFF022B03+               TTGACTCATAAAAGCTGATGAGCTCATTTGGAACAAAAAACATAAATATTACTAAA
JMFF010H24+                  ACTCATAAAAGCTGATGAGCTCATTTGGAACAAAAAACATAAATATTACTAAA
JMSF023I12+           GAAGTTGACTCATAAAAGCTGATGAGCTCATTTGGAACAAAAAACATAAATATTACTAAA
                      ____________________________________________________________
consensus             GAAGTTGACTCATAAAAGCTGATGAGCTCATTTGGAACAAAAAACATAAATATTACTAAA
 
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JMSF044A23+           AGGAACCAGCAGATGACTTTCATCATCCATCCACCATGGTGCAAATTATCACGAGGGTCC
JMFS027A07+           AGGAACCAGCAGATGACTTTCATCATCCATCCACCATGGTGCAAATTATCACGAGGGTCC
JMSF024M20+           AGGAACCAGCAGATGACTTTCATCATCCATCCACCATGGTGCAAATTATCACGAGGGTCC
JMFF039I24+           AGGAACCAGCAGATGACTTTCATCATCCATCCACCATGGTGCAAATTATCACGAGGGTCC
JMFF019N22+           AGGAACCAGCAGATGACTTTCATCATCCATCCACCATGGTGCAAATTATCACGAGGGTCC
JMFF019D09+           AGGAACCAGCAGATGACTTTCATCATCCATCCACCATGGTGCAAATTATCACGAGGGTCC
JMFF020M04+           AGGAACCAGCAGATGACTTTCATCATCCATCCACCATGGTGCAAATTATCACGAGGGTCC
JMFF022B03+           AGGAACCAGCAGATGACTTTCATCATCCATCCACCATGGTGCAAATTATCACGAGGGTCC
JMFF010H24+           AGGAACCAGCAGATGACTTTCATCATCCATCCACCATGGTGCAAATTATCACGAGGGTCC
JMSF023I12+           AGGAACCAGCAGATGACTTTCATCATCCATCCACCATGGTGCAAATTATCACGAGGGTCC
                      ____________________________________________________________
consensus             AGGAACCAGCAGATGACTTTCATCATCCATCCACCATGGTGCAAATTATCACGAGGGTCC
 
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JMSF044A23+           TTCTGATTCTTTATACCAATCATCATGATTGATAGGATGGTAAAGAACGTGAAGTTTCCC
JMFS027A07+           TTCTGATTCTTTATACCAATCATCATGATTGATAGGATGGTAAAGAACGTGAAGTTTCCC
JMSF024M20+           TTCTGATTCTTTATACCAATCATCATGATTGATAGGATGGTAAAGAACGTGAAGTTTCCC
JMFF039I24+           TTCTGATTCTTTATACCAATCATCATGATTGATAGGATGGTAAAGAACGTGAAGTTTCCC
JMFF019N22+           TTCTGATTCTTTATACCAATCATCATGATTGATAGGATGGTAAAGAACGTGAAGTTTCCC
JMFF019D09+           TTCTGATTCTTTATACCAATCATCATGATTGATAGGATGGTAAAGAACGTGAAGTTTCCC
JMFF020M04+           TTCTGATTCTTTATACCAATCATCATGATTGATAGGATGGTAAAGAACGTGAAGTTTCCC
JMFF022B03+           TTCTGATTCTTTATACCAATCATCATGATTGATAGGATGGTAAAGAACGTGAAGTTTCCC
JMFF010H24+           TTCTGATTCTTTATACCAATCATCATGATTGATAGGATGGTAAAGAACGTGAAGTTTCCC
JMSF023I12+           TTCTGATTCTTTATACCAATCATCATGATTGATAGGATGGTAAAGAACGTGAAGTTTCCC
                      ____________________________________________________________
consensus             TTCTGATTCTTTATACCAATCATCATGATTGATAGGATGGTAAAGAACGTGAAGTTTCCC
 
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JMSF044A23+           AAGCTAACTCGAAGTACTGCATCTGTTTCAAACCATTCCCTATCTGGTGTTTTGTGGAAA
JMFS027A07+           AAGCTAACTCGAAGTACTGCATCTGTTTCAAACCATTCCCTATCTGGTGTTTTGTGGAAA
JMSF024M20+           AAGCTAACTCGAAGTACTGCATCTGTTTCAAACCATTCCCTATCTGGTGTTTTGTGGAAA
JMFF039I24+           AAGCTAACTCGAAGTACTGCATCTGTTTCAAACCATTCCCTATCTGGTGTTTTGTGGAAA
JMFF019N22+           AAGCTAACTCGAAGTACTGCATCTGTTTCAAACCATTCCCTATCTGGTGTTTTGTGGAAA
JMFF019D09+           AAGCTAACTCGAAGTACTGCATCTGTTTCAAA-CATTCCCTATCTGGTGTTTTGTGGAAA
JMFF020M04+           AAGCTAACTCGAAGTACTGCATCTGTTTCAAACCATTCCCTATCTGGTGTTTTGTGGAAA
JMFF022B03+           AAGCTAACTCGAAGTACTGCATCTGTTTCAAACCATTCCCTATCTGGTGTTTTGTGGAAA
JMFF010H24+           AAGCTAACTCGAAGTACTGCATCTGTTTCAAACCATTCCCTATCTGGTGTTTTGTGGAAA
JMSF023I12+           AAGCTAACTCGAAGTACTGCATCTGTTTCAAACCATTCCCTATCTGGTGTTTTGTGGAAA
                      ____________________________________________________________
consensus             AAGCTAACTCGAAGTACTGCATCTGTTTCAAACCATTCCCTATCTGGTGTTTTGTGGAAA
 
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JMSF044A23+           TGATTAATCCATGGGATATTCTCCATGAGAGGAGCAGCAACTTCTCGAAGAATCCATGAA
JMFS027A07+           TGATTAATCCATGGGATATTCTCCATGAGAGGAGCAGCAACTTCTCGAAGAATCCATGAA
JMSF024M20+           TGATTAATCCATGGGATATTCTCCATGAGAGGAGCAGCAACTTCTCGAAGAATCCATGAA
JMFF039I24+           TGATTAATCCATGGGATATTCTCCATGAGAGGAGCAGCAACTTCTCGAAGAATCCATGAA
JMFF019N22+           TGATTAATCCATGGGATATTCTCCATGAGAGGAGCAGCAACTTCTCGAAGAATCCATGAA
JMFF019D09+           TGATTAATCCATGGGATATTCTCCATGAGAGGAGCAGCAACTTCTCGAAGAATCCATGAA
JMFF020M04+           TGATTAATCCATGGGATATTCTCCATGAGAGGAGCAGCAACTTCTCGAAGAATCCATGAA
JMFF022B03+           TGATTAATCCATGGGATATTCTCCATGAGAGGAGCAGCAACTTCTCGAAGAATCCATGAA
JMFF010H24+           TGATTAATCCATGGGATATTCTCCATGAGAGGAGCAGC-ACTTCTCGAAGAATCCATGAA
JMSF023I12+           TGATTAATCCATGGGATATTCTCCATGAGAGGAGCAGCAACTTCTCGAAGAATCCATGAA
                      ____________________________________________________________
consensus             TGATTAATCCATGGGATATTCTCCATGAGAGGAGCAGCAACTTCTCGAAGAATCCATGAA
 
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JMSF044A23+           ACAATCAGCGACAGCCCAAAAAGACCACAGTATGCAATACGAGCGGAGCGGCGGCTGATC
JMFS027A07+           ACAATCAGCGACAGCCCAAAAAGACCACAGTATGCAATACGAGCGGAGCGGCGGCTGATC
JMSF024M20+           ACAATCAGCGACAGCCCAAAAAGACCACAGTATGCAATACGAGCGGAGCGGCGGCTGATC
JMFF039I24+           ACAATCAGCGACAGCCCAAAAAGACCACAGTATGCAATACGAGCGGAGCGGCGGCTGATC
JMFF019N22+           ACAATCAGCGACAGCCCAAAAAGACCACAGTATGCAATACGAGCGGAGCGGCGGCTGATC
JMFF019D09+           ACAATCAGCGACAGCCCAAAAAGACCACAGTATGCAATACGAGCGGAGCGGCGGCTGATC
JMFF020M04+           ACAATCAGCGACAGCCCAAAAAGACCACAGTATGCAATACGAGCGGAGCGGCGGCTGATC
JMFF022B03+           ACAATCAGCGACAGCCCAAAAAGACCACAGTATGCAATACGAGCGGAGCGGCGGCTGATC
JMFF010H24+           ACAATCAGCGACAGCCCAAAAAGACCACAGTATGCAATACGAGCGGAGCGGCGGCTGATC
JMSF023I12+           ACAATCAGCGACAGCCCAAAAAGACCACAGTATGCAATACGAGCGGAGCGGCGGCTGATC
                      ____________________________________________________________
consensus             ACAATCAGCGACAGCCCAAAAAGACCACAGTATGCAATACGAGCGGAGCGGCGGCTGATC
 
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JMSF044A23+           CCTGACACCACCGTCCGGCAGGCATCACAGGCGCACGCAGCACAGCATGACGCAAGGCAA
JMFS027A07+           CCTGACACCACCGTCCGGCAGGCATCACAGGCGCACGCAGCACAGCATGACGCAAGGCAA
JMSF024M20+           CCTGACACCACCGTCCGGCAGGCATCACAGGCGCACGCAGCACAGCATGACGCAAGGCAA
JMFF039I24+           CCTGACACCACCGTCCGGCAGGCATCACAGGCGCACGCAGCACAGCATGACGCAAGGCAA
JMFF019N22+           CCTGACACCACCGTCCGGCAGGCATCACAGGCGCACGCAGCACAGCATGACGCAAGGCAA
JMFF019D09+           CCTGACACCACCGTCCGGCAGGCATCACAGGCGCACGCAGCACAGCATGACGCAAGGCAA
JMFF020M04+           CCTGACACCACCGTCCGGCAGGCATCACAGGCGCACGCAGCACAGCATGACGCAAGGCAA
JMFF022B03+           CCTGACACCACCGTCCGGCAGGCATCACAGGCGCACGCAGCACAGCATGACGCAAGGCAA
JMFF010H24+           CCTGACACCACCGTCCGGCAGGCATCACAGGCGCACGCAGCACAGCATGACGCAAGGCAA
JMSF023I12+           CCTGACACCACCGTCCGGCAGGCATCACAGGCGCACGCAGCACAGCATGACGCAAGGCAA
                      ____________________________________________________________
consensus             CCTGACACCACCGTCCGGCAGGCATCACAGGCGCACGCAGCACAGCATGACGCAAGGCAA
 
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JMSF044A23+           GAAGCTGCCCACATATTCAGAAAACTCTCCTATTCCAGTCCTTCCTTGCTGCGGTTGCGG
JMFS027A07+           GAAGCTGCCCACATATTCAGAAAACTCTCCTATTCCAGTCCTTCCTTGCTGCGGTTGCGG
JMSF024M20+           GAAGCTGCCCACATATTCAGAAAACTCTCCTATTCCAGTCCTTCCTTGCTGCGGTTGCGG
JMFF039I24+           GAAGCTGCCCACATATTCAGAAAACTCTCCTATTCCAGTCCTTCCTTGCTGCGGTTGCGG
JMFF019N22+           GAAGCTGCCCACATATTCAGAAAACTCTCCTATTCCAGTCCTTCCTTGCTGCGGTTGCGG
JMFF019D09+           GAAGCTGCCCACATATTCAGAAAACTCTCCTATTCCAGTCCTTCCTTGCTGCGGTTGCGG
JMFF020M04+           GAAGCTGCCCACATATTCAGAAAACTCTCCTATTCCAGTCCTTCCTTGCTGCGGTTGCGG
JMFF022B03+           GAAGCTGCCCACATATTCAGAAAACTCTCCTATTCCAGTCCTTCCTTGCTGCGGTTGCGG
JMFF010H24+           GAAGCTGCCCACATATTCAGAAAACTCTCCTATTCCAG----TCCTTGCTGCGGTTGCGG
JMSF023I12+           GAAGCTGCCCACATATTCAGAAAACTCTCCTATTCCAGTCCTTCCTTGCTGCGGTTGCGG
                      ____________________________________________________________
consensus             GAAGCTGCCCACATATTCAGAAAACTCTCCTATTCCAGTCCTTCCTTGCTGCGGTTGCGG
 
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JMSF044A23+           ATGAAGAGAAGAATAACAGGGTATCACTTTTCGACAATGCGTTTC               
JMFS027A07+           ATGAAGAGAAGAATAACAGGGTATCACTTTTCGACAATGCGTTTCT              
JMSF024M20+           ATGAAGAGAAGAATAACAGGGTATCACTTTTCGACAATGCGTTTCTTCGACAAAAGATGA
JMFF039I24+           ATGAAGAGAAGAATAACAGGGTATCACTTTTCGACAATGCGTTTCTTCGACAAAAGATGA
JMFF019N22+           ATGAAGAGAAGAATAACAGGGTATCACTTTTCGACAATGCGTTTCTTCGACAAAAGATGA
JMFF019D09+           ATGAAGAGAAGAATAACAGGGTATCACTTTTCGACAATGCGTTTCTTCGACAAAAGATGA
JMFF020M04+           ATGAAGAGAAGAATAACAGGGTATCACTTTTCGACAATGCGTTTCTTCGACAAAAGATGA
JMFF022B03+           ATGAAGAGAAGAATAACAGGATATC                                   
JMFF010H24+           ATGAAGAGAAGAATAACAGGGTATCACTTTTCGACAATGCGTTTCTTCGACAAAAGATGA
JMSF023I12+           ATGAAGAGAAGAATAACAGGGTATCACTTTTCGACAATGCGTTTCTTCGACAAAAGATGA
                      ____________________________________________________________
consensus             ATGAAGAGAAGAATAACAGGGTATCACTTTTCGACAATGCGTTTCTTCGACAAAAGATGA
 
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JMSF024M20+           GAGAGAGA                                                    
JMFF039I24+           GAGAGAGAT                                                   
JMFF019N22+           GAGAG                                                       
JMFF019D09+           GAGAGAGAT                                                   
JMFF020M04+           GAGAGAGAT                                                   
JMFF010H24+           GAGAGAGAT                                                   
JMSF023I12+           GAGAGAGATAGAGAGAAAGAGGCACGGTTCAAACTTATGCTTTGGTGAGTCAAAAGTCCT
                      ____________________________________________________________
consensus             GAGAGAGATAGAGAGAAAGAGGCACGGTTCAAACTTATGCTTTGGTGAGTCAAAAGTCCT