Contig 013362:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF022P01-               CCGATCACCGATCGGTACTTCGATTTAATACATAGTTTTTAAAGATATAGGAAAA
                      ____________________________________________________________
consensus                  CCGATCACCGATCGGTACTTCGATTTAATACATAGTTTTTAAAGATATAGGAAAA
 
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rJMSF022P01-          ATAGATTCATTGTAGGCCATCCACTTACTTGTATACAACAAGAAATTGTTATCTCAACTA
                      ____________________________________________________________
consensus             ATAGATTCATTGTAGGCCATCCACTTACTTGTATACAACAAGAAATTGTTATCTCAACTA
 
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rJMSF022P01-          CTGCCAGGACCAGGGACCGCTAGACAAATCAGACCACCGTCCACCACCAAATCATGGCCG
                      ____________________________________________________________
consensus             CTGCCAGGACCAGGGACCGCTAGACAAATCAGACCACCGTCCACCACCAAATCATGGCCG
 
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rJMSF022P01-          GTGATAAACGCCGAGTCGTCGGAAGCCAGAAACAGGACAGCGTTAGCCACGTGCTTCACG
                      ____________________________________________________________
consensus             GTGATAAACGCCGAGTCGTCGGAAGCCAGAAACAGGACAGCGTTAGCCACGTGCTTCACG
 
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rJMSF022P01-          TCCGACGTTATGCCTTTCAGGCTAGTTAGTGGCCCATAAATTTTCTCCACGTAGCTTGAA
                      ____________________________________________________________
consensus             TCCGACGTTATGCCTTTCAGGCTAGTTAGTGGCCCATAAATTTTCTCCACGTAGCTTGAA
 
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rJMSF022P01-          GCCTTTTCGGGATTGGCAAGAATCATTGGAGTTGGAGTAGCCGACGGCGACACACAATTG
                      ____________________________________________________________
consensus             GCCTTTTCGGGATTGGCAAGAATCATTGGAGTTGGAGTAGCCGACGGCGACACACAATTG
 
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rJMSF022P01-          ACCCTGATACCGTGGGCCCCCAGTTGCTGGCTAGCCGACCGGACCAACCCAAGAACGGCG
JMFS043A05+                    CCGTGGGCCNCCAGTTGCTGGCTCGCCGCCCGGACCAGCCCAAGAACGGCG
                      ____________________________________________________________
consensus             ACCCTGATACCGTGGGCCCCCAGTTGCTGGCTCGCCGCCCGGACCAGCCCAAGAACGGCG
 
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rJMSF022P01-          TGCTTCGACATGATGTAGTCCGTTCGCCGCACGCCGCCGCGCGTGGCGGCCATGCTTGCC
JMFS043A05+           TGCTTCGACATGACGTAGTCCGTCAGCCGCATGCATCCGCGCGTGGCAGCCGCGCTGGCC
JMSF022P01+                                               CCGCGCGTGGCGGCCATGCTTGCC
                      ____________________________________________________________
consensus             TGCTTCGACATGATGTAGTCCGTTCGCCGCATGCCTCCGCGCGTGGCGGCCATGCTTGCC
 
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rJMSF022P01-          GTGCAGATGATGCTCCCCCTCACGCGCCCCTCCACCATTGCACGCGCCGCGTGCTTGACG
JMFS043A05+           GTGCAGATGATGTTCCCCCTCACGCGCCCCTCCACCATCGCACGCGCCGCGTGCTTGACG
JMSF022P01+           GTGCAGATGATGCTCCCCCTCACGCGCCCNTCCACCATTGCACGCGCCGCGTGCTTGACG
                      ____________________________________________________________
consensus             GTGCAGATGATGCTCCCCCTCACGCGCCCCTCCACCATTGCACGCGCCGCGTGCTTGACG
 
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rJMSF022P01-          CAAACTGCTGTGCCTCGCGCGTTGACACGAAAAACCCGGTCGAAGTGGGAGAAGTCGAGG
JMFS043A05+           CAAACCGCCATGCCTCGCACGTTGATGCGGAAAACCCGGTCGAAGTCGGAGAAGTCGAGG
JMSF022P01+           CAAACTGCTGTGCCTCGCGCGTTGACACGAAAAACCCGGTCGAAGTGGGAGAAGTCGAGG
                      ____________________________________________________________
consensus             CAAACTGCTGTGCCTCGCGCGTTGACACGAAAAACCCGGTCGAAGTGGGAGAAGTCGAGG
 
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rJMSF022P01-          TCGAGGACCTTCTGGTCGGAGGGGCTCGCCGTGCCGGCATTGCTGAACATGACGTCTAGC
JMFS043A05+           TCGAGGACCTTCTGGGCGGAGCGGCACGGCGTGCCGGCGTTGCTGAACATGACGTCTAGC
JMSF022P01+           TCGAGGACCTTCTGGTCGGAGGGGCTCGCCGTGCCGGCATTGCTGAACATGACGTCTAGC
                      ____________________________________________________________
consensus             TCGAGGACCTTCTGGTCGGAGGGGCTCGCCGTGCCGGCATTGCTGAACATGACGTCTAGC
 
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rJMSF022P01-          CGGCCGTACTTTTGGACCGTCCAATCTACCATGGCCTTCACTTGCTCCTCGTCGCTAACG
JMFS043A05+           CGGCCGTACTTTTGGACCGTCCAATCTACCATGGCCTTCACTTGCTCCTCGTCGCTAATG
JMSF022P01+           CGGCCGTACTTTTGGACCGTCCAATCTACCATGGCCTTCACTTGCTCCTCGTCGCTAACG
                      ____________________________________________________________
consensus             CGGCCGTACTTTTGGACCGTCCAATCTACCATGGCCTTCACTTGCTCCTCGTCGCTAACG
 
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rJMSF022P01-          TCGCACTTCACGAAGCTGCACTTCTCGAGGCCGAT                         
JMFS043A05+           TCGCACTTTACGAAACTGCACTTGTCGAGGCCGATGGCCTCCGCCACGGCGACGCCCTTC
JMSF022P01+           TCGCACTTCACGAAGCTGCACTTCTCGAGGCCGATGGCCTCCGCCACGGCGACGCCCTTC
                      ____________________________________________________________
consensus             TCGCACTTCACGAAGCTGCACTTCTCGAGGCCGATGGCCTCCGCCACGGCGACGCCCTTC
 
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JMFS043A05+           TCGTCCTGGATGTCGGCGATGACGACGGCTCGTGTGCCGTGATCAGCAAAAAGCCGAGCT
JMSF006I23+                        CGGCAATGACGACGGCTCGTGTGCCGTGATCGGCAAAAAGCCGAGCG
JMSF022P01+           TCGTCCTGGATGTCGGCAATGACGACGGCTCGTGTGCCGTGATCGGCAAAAAGCCGAGCG
                      ____________________________________________________________
consensus             TCGTCCTGGATGTCGGCAATGACGACGGCTCGTGTGCCGTGATCGGCAAAAAGCCGAGCG
 
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JMFS043A05+           GTCGCTTCACCGATGCCGCTAGCACCGCCAGTGACTATCACAACTTTGCCTTGGAGCCTT
JMSF006I23+           GTCGCTTCCCCAATGCCGCTAGCACCGCCAGTGACTATCACAACTTTACCTTGGAGCTTT
JMSF022P01+           GTCGCTTCCCCAATGCCGCTAGCACCGCCAGTGACTATCACAACTTTACCTTGGAGCTTT
                      ____________________________________________________________
consensus             GTCGCTTCCCCAATGCCGCTAGCACCGCCAGTGACTATCACAACTTTACCTTGGAGCTTT
 
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JMFS043A05+           TTCATGCAAGAATTTGGTGTGCTCATTGCCTCATTCACCTTTGATTCATTCCTGTCTTCC
JMSF006I23+           TTCATGCAAGAATTTGATGTGCCCATTGTCTCATTAACCTTTGATTCATGCCCGTCTTCC
JMSF022P01+           TTCATGCAAGAATTTGATGTGCCCATTGTCTCATTAACCTTTGATTCATGCCCGTCTTCC
                      ____________________________________________________________
consensus             TTCATGCAAGAATTTGATGTGCCCATTGTCTCATTAACCTTTGATTCATGCCCGTCTTCC
 
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JMFS043A05+           ATTAC                                                       
JMSF006I23+           ATTA-------------CTCTTTGGTCGCCGGTCGGTTTTCAATGGTGGGCGGTCAGGGT
JMSF022P01+           ATTACTACAAAGAAAATCTCTTTGGTCGCCGGTCGGTTTTCAATGGTGGGCGGTCAGGGT
                      ____________________________________________________________
consensus             ATTACTACAAAGAAAATCTCTTTGGTCGCCGGTCGGTTTTCAATGGTGGGCGGTCAGGGT
 
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JMSF006I23+           CAGGCTACGGTGGTGAGAAAGGTTCAGGCTACGGTGGCGAGAAGAGGTCAGGCTACCATG
JMSF022P01+           CAGGCTACGGTGGTGAGAAAGGTTCAGGCTACGGTGGCGAGAAGAGGTCAGGCTACGATG
                      ____________________________________________________________
consensus             CAGGCTACGGTGGTGAGAAAGGTTCAGGCTACGGTGGCGAGAAGAGGTCAGGCTACGATG
 
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JMSF006I23+           GCGACTGGCAAGACCGCGAGAAGAGGCGGAGGGCGGAGGCTGCGTTTTGATTTC      
JMSF022P01+           GCGACTGGCAAGACCGCGAGAAGAGGCGGAGGGCGGAGGCTGCGTTTTGATTTCAGTCCC
                      ____________________________________________________________
consensus             GCGACTGGCAAGACCGCGAGAAGAGGCGGAGGGCGGAGGCTGCGTTTTGATTTCAGTCCC