| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF002D13 | Sequence | 339 | 013361 (7) | dbj|BAO57273.1| | 1e-18 | protein phosphatase 2A [Ipomoea nil] | 787 | 013361 (7) | gb|EYU28671.1| | 1e-84 | hypothetical protein MIMGU_mgv1a0106402mg, partial [Erythranthe guttata] |
| JMSF015D11 | Sequence | 551 | 013361 (7) | ref|XP_009794958.1| | 7e-69 | PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit-like [Ni | |||||
| JMSF022O02 | Sequence | 641 | 013361 (7) | dbj|BAO57273.1| | 7e-90 | protein phosphatase 2A [Ipomoea nil] | 759 | 013361 (7) | dbj|BAO57273.1| | 1e-162 | protein phosphatase 2A [Ipomoea nil] |
| JMSF027N08 | Sequence | 676 | 013361 (7) | dbj|BAO57273.1| | 4e-93 | protein phosphatase 2A [Ipomoea nil] | 728 | 013361 (7) | ref|XP_011071048.1| | 2e-109 | PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit-like [Se |
This contig is upended
. : . : . : . : . : . :
rJMSF002D13- AAAAGGGTTTA
____________________________________________________________
consensus AAAAGGGTTTA
. : . : . : . : . : . :
rJMSF002D13- GTGCATAAATTAGTTTCCCAATTTTTTTGCAAATACTTCCTGTATTGCAGCAAATGCCTA
____________________________________________________________
consensus GTGCATAAATTAGTTTCCCAATTTTTTTGCAAATACTTCCTGTATTGCAGCAAATGCCTA
. : . : . : . : . : . :
rJMSF002D13- TCTACGAAAATTGAAAATCCCTGCTGAAAGAAAGAAGAGGGGATGTAGTCACTCACTCCA
____________________________________________________________
consensus TCTACGAAAATTGAAAATCCCTGCTGAAAGAAAGAAGAGGGGATGTAGTCACTCACTCCA
. : . : . : . : . : . :
rJMSF002D13- AAAGCCATGCCATTGTATTTCATCTTCAAAGCCTCCACATAGAAACTACCCGCTACACAT
rJMSF027N08- AAGCCTCCACATAGAAACTACCCGCTACACAT
____________________________________________________________
consensus AAAGCCATGCCATTGTATTTCATCTTCAAAGCCTCCACATAGAAACTACCCGCTACACAT
. : . : . : . : . : . :
rJMSF002D13- TTTTGGCAGCTAACAAGGCCAACAATGGAAAATAATAACAATAACAAAATTCATACATAC
rJMSF027N08- TTTTGGCAGCTAACAAGGCCAACAATGGAAAATAATAACAATAACAAAATTCATACATAC
____________________________________________________________
consensus TTTTGGCAGCTAACAAGGCCAACAATGGAAAATAATAACAATAACAAAATTCATACATAC
. : . : . : . : . : . :
rJMSF002D13- CTTTGATCCCTTCCAGCATATTTTTAAGCAAAATAATGCTCAAAGATTCAGGGTTAAAAA
rJMSF027N08- CTTTGATCCCTTCCAGCATATTTTTAAGCAAAATAATGCTCAAAGATTCAGGGTTAAAAA
____________________________________________________________
consensus CTTTGATCCCTTCCAGCATATTTTTAAGCAAAATAATGCTCAAAGATTCAGGGTTAAAAA
. : . : . : . : . : . :
rJMSF002D13- AATTTTGCCCAAAAGTGGACGCCTTGGCTTGTATGGATTAATAGGACACAAAGAAAGAAC
rJMSF027N08- AATTTTGCCCAAAAGTGGACGCCTTGGCTTGTATGGATTAATAGGACACAAAGAAAGAAC
____________________________________________________________
consensus AATTTTGCCCAAAAGTGGACGCCTTGGCTTGTATGGATTAATAGGACACAAAGAAAGAAC
. : . : . : . : . : . :
rJMSF002D13- ACAGCTAGGGCTGGCTGTAAACAATGAGCAGAAGTATAAAGATCACAAAAAATAGTCCGG
rJMSF027N08- ACAGCTAGGGCTGGCTGTAAACAATGAGCAGAAGTATAAAGATCACAAAAAATAGTCCGG
rJMSF022O02- ATCACAAAAAATAATCTGG
____________________________________________________________
consensus ACAGCTAGGGCTGGCTGTAAACAATGAGCAGAAGTATAAAGATCACAAAAAATAGTCCGG
. : . : . : . : . : . :
rJMSF002D13- TGTCTTCCTTGTAGTGTCGGGCTCGATCTGTCGAGGAGCAGGGTCGAATTGAAGAAAATT
rJMSF027N08- TGTCTTCCTTGTAGTGTCGGGCTCGATCTGTCGAGGAGCAGGGTCGAATTGAAGAAAATT
rJMSF022O02- AGTCTTCCTTGTAGTGTCCGGCTCAATCTGCCGAGGAGCAGGATCAAACTGAAGGAAATT
____________________________________________________________
consensus TGTCTTCCTTGTAGTGTCGGGCTCGATCTGTCGAGGAGCAGGGTCGAATTGAAGAAAATT
. : . : . : . : . : . :
rJMSF002D13- CTGCTCCATGTTTTCCCCGATTTCTAGTATTGCTGCCATATTCCCACACCGGTAACAGTA
rJMSF027N08- CTGCTCCATGTTTTCCCCGATTTCTAGTATTGCTGCCATATTCCCACACCGGTAACAGTA
rJMSF022O02- TTGTTCCATGTTTTCCCCGACTTCTAGAATGGCAGCCATGTTGCCACACCGGTAACAATA
____________________________________________________________
consensus CTGCTCCATGTTTTCCCCGATTTCTAGTATTGCTGCCATATTCCCACACCGGTAACAGTA
. : . : . : . : . : . :
rJMSF002D13- GTTTGGAGCACTAAATACAGTCACAACATTCTTATCCTGACACCAGTTGTAACCTTCCAT
rJMSF027N08- GTTTGGAGCACTAAATACAGTCACAACATTCTTATCCTGACACCAGTTGTAACCTTCCAT
rJMSF022O02- GTTTGGAGCGCTGAATACCGTCACCACATTCTTATCCTGACACCAGTTATAGCCCTCCAT
____________________________________________________________
consensus GTTTGGAGCACTAAATACAGTCACAACATTCTTATCCTGACACCAGTTGTAACCTTCCAT
. : . : . : . : . : . :
rJMSF002D13- AACAAGCTGGTGAGCTCTTGAAATGAGAGTGAGCCCATTGGTGTGGTTGAACTGAGCAGC
rJMSF027N08- AACAAGCTGGTGAGCTCTTGAAATGAGAGTGAGCCCATTGGTGTGGTTGAACTGAGCAGC
rJMSF022O02- AACAAGCTGATGAGCTCTTGAAATGAGTGTGAGCCCATTGGTGTGGTTGAACTGAGAAGC
____________________________________________________________
consensus AACAAGCTGGTGAGCTCTTGAAATGAGAGTGAGCCCATTGGTGTGGTTGAACTGAGCAGC
. : . : . : . : . : . :
rJMSF002D13- TATATCCTGTCCAAAGGTGTACCCAGCCCCTCGAGGAGAAATTCCCCAACCACAACGATC
rJMSF027N08- TATATCCTGTCCAAAGGTGTACCCAGCCCCTCGAGGAGAAATTCCCCAACCACAACGATC
rJMSF022O02- TATATCTTGTCCGAAGGTGTAGCCAGCTCCTCTGGGAGATATTCCCCAGCCACACCGATC
____________________________________________________________
consensus TATATCCTGTCCAAAGGTGTACCCAGCCCCTCGAGGAGAAATTCCCCAACCACAACGATC
. : . : . : . : . : . :
rJMSF002D13- ATCCGGATCAGACCATAAGAGATCGCACATTGGCCCTTCATGGGGAACCTCCTGTA
rJMSF027N08- ATCCGGATCAGACCATAAGAGATCGCACATTGGCCCTTCATGGGGAACCTCCTGTATACG
rJMSF022O02- ATCCGGGTCTGACCATAACAGATCGCACATTGGACCTTCATGGGGGACCTCTTGTATACG
____________________________________________________________
consensus ATCCGGATCAGACCATAAGAGATCGCACATTGGCCCTTCATGGGGAACCTCCTGTATACG
. : . : . : . : . : . :
rJMSF027N08- ATCTAGAGCTCGAATGTTATCAAGTGTATCCAAAGATGGTGAAAGTCCTCCGTGCAAACA
rJMSF022O02- ATCCAGAGCTCGGATATTATCAAGGGTATCCAGAGATGGTGAAAGTCCTCCATGCAAACA
____________________________________________________________
consensus ATCTAGAGCTCGGATGTTATCAAGTGTATCCAGAGATGGTGAAAGTCCTCCGTGCAAACA
. : . : . : . : . : . :
rJMSF027N08- GAATACCTGACTCTCAATAAGTGCTGTCAG
rJMSF022O02- GAATATCTGACTCTCAATAAGTGCTGTCAGAGGTAGATAATCGAAGAGATCAGTGAAAAA
JMSF027N08+ CTCAATAAGTGCTGTCAGAGGTAGATAATCAAAGAGATCTGTGAAAAA
____________________________________________________________
consensus GAATATCTGACTCTCAATAAGTGCTGTCAGAGGTAGATAATCGAAGAGATCTGTGAAAAA
. : . : . : . : . : . :
rJMSF022O02- CTTCCAAA-CGTTTGCATTTCCGTACTTCCTCAAGCATTCATCATAGAAACCATAAACTT
JMSF027N08+ CTTCCAAANCATGGGCATTTCCATACTTCCTCAAACATTCATCATAGAAACCATACACTT
JMSF022O02+ TACTTCCTCAAGCATTCATCATAGAAACCATAAACTT
____________________________________________________________
consensus CTTCCAAANCGTTTGCATTTCCGTACTTCCTCAAGCATTCATCATAGAAACCATAAACTT
. : . : . : . : . : . :
rJMSF022O02- GGGTGATTTGCCGGCTTTCATGATTTCCCCTAAGAATTGTAATCCTATCTCTGTAGCGTA
JMSF027N08+ GGGTAATTTGCCGACTTTCATGATTTCCCCTAAGAATTGTGATTCTATCTCTGTAACGAA
JMSF022O02+ GGGTGATTTGCCGGCTTTCATGATTTCCCCTAAGAATTGTAATCCTATCTCTGTAGCGTA
____________________________________________________________
consensus GGGTGATTTGCCGGCTTTCATGATTTCCCCTAAGAATTGTAATCCTATCTCTGTAGCGTA
. : . : . : . : . : . :
rJMSF022O02- CTTTCAGAGCAACTAAAAGGGTAACAGTCTCCACTGAATAGTACCCACG
JMSF027N08+ CCTTCAAAGCAACTAAAAGTGTAACAGTCTCCACTGAATAGTATCCACGATCTACGTAAT
JMSF015D11+ AGCAACCAAAAGTGTTACTGTCTCAACTGAATAATAACCACGATCAACATAAT
JMSF022O02+ CTTTCAGAGCAACTAAAAGGGTAACAGTCTCCACTGAATAGTACCCACGGTCAACATAAT
____________________________________________________________
consensus CTTTCAGAGCAACTAAAAGGGTAACAGTCTCCACTGAATAGTACCCACGATCAACATAAT
. : . : . : . : . : . :
JMSF027N08+ CTCCCATGAAAAGATAGTTGGTGTCAGGAGCTTTGCCGCCTATCCGAAACAGCTCGATCA
JMSF015D11+ CTCCCATGAAAAGGTAATTAGTGTCAGGAGCGTTGCCGCCTATCCTAAATAGCTCGATCA
JMSF022O02+ CTCCCATGAAAAGGTAGTTGGTGTCAGGAGATTTGCCGCCTATCCTAAAAAGCTCGATCA
____________________________________________________________
consensus CTCCCATGAAAAGGTAGTTGGTGTCAGGAGCTTTGCCGCCTATCCTAAATAGCTCGATCA
. : . : . : . : . : . :
JMSF027N08+ GATCATAGAACTGCCCATGAATGTCTCCACAGACCGTGACTGGACATTTCACCGGCTGCA
JMSF015D11+ GATCATAGAACTGGCCATGAATATCTCCGCATACTGTGACCGGACATTTTACCGGCTGTA
JMSF002D13+ A
JMSF022O02+ GATCGTAGAACTGCCCATGAATGTCTCCGCAGACGGTGACCGGACATTTCACCGGCTGGA
____________________________________________________________
consensus GATCATAGAACTGCCCATGAATGTCTCCGCAGACTGTGACCGGACATTTCACCGGCTGTA
. : . : . : . : . : . :
JMSF027N08+ CATTCCACTCCTCCACCAGAATTGCCCTCGCCTGATCACAAAGAGTCTTCACCTCCTGCT
JMSF015D11+ CATTCCACTCTTCTACTAGAATCGTCCTCGCCTGATCACACAGCGTTTTCACCTCCGATT
JMSF002D13+ CATTCCACTCCTCCACCAGAATTGCCCTCGCCTGATCACAAAGAGTCTTCACCTCCTGCT
JMSF022O02+ CATTCCACTCCTCCACCAGAATCGCCCTCGCCTGATCACACAGCGTCTTCACCTCCGCCT
____________________________________________________________
consensus CATTCCACTCCTCCACCAGAATTGCCCTCGCCTGATCACACAGCGTCTTCACCTCCTGCT
. : . : . : . : . : . :
JMSF027N08+ CCGTCAACGGCTTGCAGTCCATCAACTGCTCGATCTGCCGATCTACATCCGCGTGCGAAG
JMSF015D11+ CCGTCAGCGGCTTGCAATCCATAAGCTGCTCGATCTGCCGATCCAGATCCGCGTGCGCAG
JMSF002D13+ CCGTCAACGGCTTGCAGTCCATCAACTGCTCGATCTGCCGATCTACATCCGCGTGCGAAG
JMSF022O02+ CCGTCAGCGGCTTGCAATCCATCAACTGCTCGATCTGCCGATCTAGATCCGCGTGCGAAG
____________________________________________________________
consensus CCGTCAGCGGCTTGCAGTCCATCAACTGCTCGATCTGCCGATCTAGATCCGCGTGCGAAG
. : . : . : . : . : . :
JMSF027N08+ GCATT
JMSF015D11+ GCATTT
JMSF002D13+ GCATT
JMSF022O02+ GCATTTCTTATTATTTTTATTATACTCCGTACTATTTTTTTTCCAGGAATTCCCGTCAAC
____________________________________________________________
consensus GCATTTCTTATTATTTTTATTATACTCCGTACTATTTTTTTTCCAGGAATTCCCGTCAAC
. : . : . : . : . : . :
JMSF022O02+ ACCTCTCCCTCCACCACCGATCCGAGACTGAAATTTCAGCAGAAAATACAATAAACACCT
____________________________________________________________
consensus ACCTCTCCCTCCACCACCGATCCGAGACTGAAATTTCAGCAGAAAATACAATAAACACCT
. : . : . : . : . : . :
JMSF022O02+ AATCTGAATCAGAAAATTGCGCAACTTTAGGGTTTCGCTCACCCAATCATTCCATACTCC
____________________________________________________________
consensus AATCTGAATCAGAAAATTGCGCAACTTTAGGGTTTCGCTCACCCAATCATTCCATACTCC
. : . : . : . : . : . :
JMSF022O02+ TCAGATTTTCCATTCTCAATTTCTTTCTCTCTCTAGAAAATTAGAAAATGCAGCAAAGCC
____________________________________________________________
consensus TCAGATTTTCCATTCTCAATTTCTTTCTCTCTCTAGAAAATTAGAAAATGCAGCAAAGCC