Contig 013360:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF022N07-                                                      CTAGATTAAGCAGCAT
                      ____________________________________________________________
consensus                                                         CTAGATTAAGCAGCAT
 
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rJMSF022N07-          CCAATCCAATTGCCATCACATTACTACTAAGTACTAACCAATAAATGTCAGTACAGAAAT
                      ____________________________________________________________
consensus             CCAATCCAATTGCCATCACATTACTACTAAGTACTAACCAATAAATGTCAGTACAGAAAT
 
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rJMSF022N07-          GGAATTACAGCCTTTCTTTTCCTTGGATAATCTTCCCCAAATTTCTCCAAGTACCATTGC
                      ____________________________________________________________
consensus             GGAATTACAGCCTTTCTTTTCCTTGGATAATCTTCCCCAAATTTCTCCAAGTACCATTGC
 
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rJMSF022N07-          CGATGAGACCAAGCCCGGGGCATCAAGTTGGCACAAGTGAAGAGAAAGAAAGCAAAGCCA
                      ____________________________________________________________
consensus             CGATGAGACCAAGCCCGGGGCATCAAGTTGGCACAAGTGAAGAGAAAGAAAGCAAAGCCA
 
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rJMSF022N07-          GCAGCCGACCAAGTCATCAAAAACCAGCCCAACCACTCCAAAATCTCCCCAAAGTAGTTA
JMSF022N07+                                                             AAAGTAGTTA
                      ____________________________________________________________
consensus             GCAGCCGACCAAGTCATCAAAAACCAGCCCAACCACTCCAAAATCTCCCCAAAGTAGTTA
 
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rJMSF022N07-          GGGCAGCTCACATACTCATACAGTCCACCTCTGGGAATCTTATACCCACCACCCTCACTC
JMSF022N07+           GGGCAGCTCACATACTCATACAGTCCACCTCTGGGAATCTTATACCCACCACCCTCACTC
                      ____________________________________________________________
consensus             GGGCAGCTCACATACTCATACAGTCCACCTCTGGGAATCTTATACCCACCACCCTCACTC
 
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rJMSF022N07-          TTTAGACGAAGCAATACTTTATCAGCCCATACATTCACCGCCATCCCGGCCAGAAAAACT
JMSF022N07+           TTTAGACGAAGCAATACTTTATCAGCCCATACATTCACCGCCATCCCGGCCAGAAAAACT
                      ____________________________________________________________
consensus             TTTAGACGAAGCAATACTTTATCAGCCCATACATTCACCGCCATCCCGGCCAGAAAAACT
 
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rJMSF022N07-          GCCATTCCGCAAGCGAATCGCCACCAGAACAACCCA-CCACCCTCATAATCAGCATAATG
JMSF022N07+           GCCATTCCGCAAGCGAATCGCCACCAGAACAACCCACCCACCCTCATAATCAGCATAATG
                      ____________________________________________________________
consensus             GCCATTCCGCAAGCGAATCGCCACCAGAACAACCCACCCACCCTCATAATCAGCATAATG
 
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rJMSF022N07-          GGAGACCCATCTGGTCTGCAAATAAGCATTCAGAATATTGAAAGTGAACGCCATCAAAGC
JMSF022N07+           GGAGACCCATCTGGTCTGCAAATAAGCATTCAGAATATTGAAAGTGAACGCCATCAAAGC
                      ____________________________________________________________
consensus             GGAGACCCATCTGGTCTGCAAATAAGCATTCAGAATATTGAAAGTGAACGCCATCAAAGC
 
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rJMSF022N07-          AACACTTACAGGGAAACCAGCGGCCGCTCTCCGTGGATCGGAGTTGAGGTAGAGCCTGAG
JMSF022N07+           AACACTTACAGGGAAACCAGCGGCCGCTCTCCGTGGATCGGAGTTGAGGTAGAGCCTGAG
                      ____________________________________________________________
consensus             AACACTTACAGGGAAACCAGCGGCCGCTCTCCGTGGATCGGAGTTGAGGTAGAGCCTGAG
 
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rJMSF022N07-          CGGGTAGACGATGGTGCGGTGGGCGTAGTGAAGCAGATACGGAGCCATAAGGATTTGGGC
JMSF022N07+           CGGGTAGACGATGGTGCGGTGGGCGTAGTGAAGCAGATACGGAGCCATAAGGATTTGGGC
                      ____________________________________________________________
consensus             CGGGTAGACGATGGTGCGGTGGGCGTAGTGAAGCAGATACGGAGCCATAAGGATTTGGGC
 
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rJMSF022N07-          GAGCGGATTGGAAGAGCTCCTGCCAAAAGGGAATAGGAGAAGCGTGAGCCATATAGCAGG
JMSF022N07+           GAGCGGATTGGAAGAGCTCCTGCCAAAAGGGAATAGGAGAAGCGTGAGCCATATAGCAGG
                      ____________________________________________________________
consensus             GAGCGGATTGGAAGAGCTCCTGCCAAAAGGGAATAGGAGAAGCGTGAGCCATATAGCAGG
 
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rJMSF022N07-          GCTCTCCATGAGAAACCAAGCCAAAGGCGGGCTGATTGTGGGCCCCCATCCAGGGCGGAC
JMSF022N07+           GCTCTCCATGAGAAACCAAGCCAAAGGCGGGCTGATTGTGGGCCCCCATCCAGGGCGGAC
                      ____________________________________________________________
consensus             GCTCTCCATGAGAAACCAAGCCAAAGGCGGGCTGATTGTGGGCCCCCATCCAGGGCGGAC
 
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rJMSF022N07-          GTGTTTGCCAAAAGGCGCGGTGATGAA                                 
JMSF022N07+           GTGTTTGCCAAAAGGCGCGGTGATGAAGCGGCAGGCGATGTACACAGGCGGCGCAATGAG
                      ____________________________________________________________
consensus             GTGTTTGCCAAAAGGCGCGGTGATGAAGCGGCAGGCGATGTACACAGGCGGCGCAATGAG
 
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JMSF022N07+           GAGCAGAACGAAGACGCTATGGCGGAAGAGCCATTGATCCGACTCCATTACTTCTCGGAT
                      ____________________________________________________________
consensus             GAGCAGAACGAAGACGCTATGGCGGAAGAGCCATTGATCCGACTCCATTACTTCTCGGAT
 
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JMSF022N07+           AGACATCATTTTCTTCAACCTGGAAGGATCTCTTCAATCTTGATCCAACCTCGCAACGCC
                      ____________________________________________________________
consensus             AGACATCATTTTCTTCAACCTGGAAGGATCTCTTCAATCTTGATCCAACCTCGCAACGCC