Contig 013355:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS042C08Sequence461013355 (7)tpg|DAA47031.1|9e-13TPA: hypothetical protein ZEAMMB73_787140 [Zea mays]
JMFS073D06Sequence601013355 (7)
JMFS133A06Sequence610013355 (7)ref|XP_008351827.1|3e-04PREDICTED: probable boron transporter 2 [Malus domestica]
JMFS145G07Sequence624013355 (7)ref|XP_008351827.1|1e-07PREDICTED: probable boron transporter 2 [Malus domestica]
JMFS161G10Sequence606013355 (7)
JMSF005P24Sequence368013355 (7)
JMSF022G01Sequence685013355 (7)ref|XP_008351827.1|4e-17PREDICTED: probable boron transporter 2 [Malus domestica]732024560ref|XP_006419285.1|2e-38hypothetical protein CICLE_v10004419mg [Citrus clementina] ref|XP_006488773.1| P

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS042C08+                    GTTATAGTTTTGAGCCCGCTAGATCAGGTCTATATTGAGGGGATGTTGTAC
                      ____________________________________________________________
consensus                      GTTATAGTTTTGAGCCCGCTAGATCAGGTCTATATTGAGGGGATGTTGTAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS042C08+           ATGAATGTATACATGAGTGCAGTTGGTTGGGCTACCCCTACTATTAGTAGAGTGTGGCCA
                      ____________________________________________________________
consensus             ATGAATGTATACATGAGTGCAGTTGGTTGGGCTACCCCTACTATTAGTAGAGTGTGGCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS042C08+           CCAATGATAGAATGTATAATTGCTCAAAGTGCAGTTCGAGCTAAGGTTTGCAATGCTGTG
                      ____________________________________________________________
consensus             CCAATGATAGAATGTATAATTGCTCAAAGTGCAGTTCGAGCTAAGGTTTGCAATGCTGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS042C08+           ATTAGCCCTATCAAGTGTATTCGTTTGTCATGCTGCTTCTCCCAAGGCGAGACTAGCTAG
                      ____________________________________________________________
consensus             ATTAGCCCTATCAAGTGTATTCGTTTGTCATGCTGCTTCTCCCAAGGCGAGACTAGCTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS042C08+           TGTATCGCAGACAGCAGATCAATATGTATGTGGTGGCGGGTATAATCTTCAAGCCAGCCC
JMSF022G01+                                                             AAGCCAGCCC
                      ____________________________________________________________
consensus             TGTATCGCAGACAGCAGATCAATATGTATGTGGTGGCGGGTATAATCTTCAAGCCAGCCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS042C08+           TTAATCCGCCAGTCCAGTTTTGTTTATACCATAGTAGCCTCCCATTGAGATCATTTTTGA
JMFS133A06+                                                                 TTTTGA
JMFS073D06+                                                                TTTTTGA
JMFS161G10+                                                                 TTTTGA
JMFS145G07+                           GTCTTGTTTATAGCAGAGTAGCCTCCCTTTGAGATCATTTTTGA
JMSF022G01+           TTAAGCCACCAGTCCAGTCTTGTTTATAGCAGAGTAGCCTCCCTTTGAGATCATTTTTGA
                      ____________________________________________________________
consensus             TTAATCCGCCAGTCCAGTCTTGTTTATAGCAGAGTAGCCTCCCTTTGAGATCATTTTTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS042C08+           CTC                                                         
JMFS133A06+           CTCCACGAAAGGGAACAAAGGTCTCTTCCATATTAGGGTTTAGGGTTGTTCACAGTGAAA
JMFS073D06+           CTCCACGAAAGGGAACAAAGGTCTCTTCCATATTAGGGTTTAGGGTTGTTCACAGTGAAA
JMFS161G10+           CTCCACGAAAGGGAACAAAGGTCTCTTCCATATTAGGGTTTAGGGTTGTTCACAGTGAAA
JMFS145G07+           CTCCACGAAAGGGAACAAAGGTCTCTTCCATATTAGGGTTTAGGGTTGTTCACAGTGAAA
JMSF022G01+           CTCCACGAAAGGGAACAAAGGTCTCTTCCATATTAGGGTTTAGGGTTGTTCACAGTGAAA
                      ____________________________________________________________
consensus             CTCCACGAAAGGGAACAAAGGTCTCTTCCATATTAGGGTTTAGGGTTGTTCACAGTGAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS133A06+           TGTGAATGGCTTTAATTGCTATGCTAGCAGCTAATTGCAGTGCATATAGAAGAAGTTGGA
JMFS073D06+           TGTGAATGGCTTTAATTGCTATGCTAGCAGCTAATTGCAGTGCATATAGAAGAAGTTGGA
JMFS161G10+           TGTGAATGGCTTTAATTGCTATGCTAGCAGCTAATTGCAGTGCATATAGAAGAAGTTGGA
JMFS145G07+           TGTGAATGGCTTTAATTGCTATGCTAGCAGCTAATTGCAGTGCATATAGAAGAAGTTGGA
JMSF022G01+           TGTGAATGGCTTTAATTGCTATGCTAGCAGCTAATTGCAGTGCATATAGAAGAAGTTGGA
                      ____________________________________________________________
consensus             TGTGAATGGCTTTAATTGCTATGCTAGCAGCTAATTGCAGTGCATATAGAAGAAGTTGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS133A06+           TTTAGGTAGCATCCATAGTCCATAGAGAGA-GGGGAGAGATGCGAGTGGCCATTGCAAGT
JMFS073D06+           TTTAGGTAGCATCCATAGTCCATAGAGAGA-GGGGAGAGATGCGAGTGGCCATTGCAAGT
JMFS161G10+           TTTAGGTAGCATCCATAGTCCATAGAGAGA-GGGGAGAGATGCGAGTGGCCATTGCAAGT
JMSF005P24+               GGTAGCATCCATAGTCCATAGAGAGANGGGGAGAGATGCGAGTGNCCA-TGCAAGN
JMFS145G07+           TTTAGGTAGCATCCATAGTCCATAGAGAGA-GGGGAGAGATGCGAGTGGCCATTGCAAGT
JMSF022G01+           TTTAGGTAGCATCCATAGTCCATAGAGAGA-GGGGAGAGATGCGAGTGGCCATTGCAAGT
                      ____________________________________________________________
consensus             TTTAGGTAGCATCCATAGTCCATAGAGAGA-GGGGAGAGATGCGAGTGGCCATTGCAAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS133A06+           TGAAGGCTACAAATCAAATCAAAAACACATACAATGGAGAAGCAAAACTGAAATGAAAAA
JMFS073D06+           TGAAGGCTACAAATCAAATCAAAAACACATACAATGGAGAAGCAAAACTGAAATGAAAAA
JMFS161G10+           TGAAGGCTACAAATCAAATCAAAAACACATACAATGGAGAAGCAAAACTGAAATGAAAAA
JMSF005P24+           TGAAGGCTACAAATCAAATCAAAAACACATACAATGGAGAAGCAAAACTGAAATGAAAAA
JMFS145G07+           TGAAGGCTACAAATCAAATCAAAAACACATACAATGGAGAAGCAAAACTGAAATGAAAAA
JMSF022G01+           TGAAGGCTACAAATCAAATCAAAAACACATACAATGGAGAAGCAAAACTGAAATGAAAAA
                      ____________________________________________________________
consensus             TGAAGGCTACAAATCAAATCAAAAACACATACAATGGAGAAGCAAAACTGAAATGAAAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS133A06+           AAGTGTTGCTAGTTATATATATTGGAAGACAATGGGAGTAAATCTGTTAAATGTAAAAGA
JMFS073D06+           AAGTGTTGCTAGTTATATATATTGGAAGACAATGGGAGTAAATCTGTTAAATGTAAAAGA
JMFS161G10+           AAGTGTTGCTAGTTATATATATTGGAAGACAATGGGAGTAAATCTGTTAAATGTAAAAGA
JMSF005P24+           AAGTGTTGCTAGTTATATATATTGGAAGACAATGGGAGTAAATCTGTTAAATGTAAAAGA
JMFS145G07+           AAGTGTTGCTAGTTATATATATTGGAAGACAATGGGAGTAAATCTGTTAAATGTAAAAGA
JMSF022G01+           AAGTGTTGCTAGTTATATATATTGGAAGACAATGGGAGTAAATCTGTTAAATGTAAAAGA
                      ____________________________________________________________
consensus             AAGTGTTGCTAGTTATATATATTGGAAGACAATGGGAGTAAATCTGTTAAATGTAAAAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS133A06+           AAGGAAGTAGATATAGATAGTTTGTTGTTGTGTTAAGGCCAGAACAGCATCAAGCTAAGA
JMFS073D06+           AAGGAAGTAGATATAGATAGTTTGTTGTTGTGTTAAGGCCAGAACAGCATCAAGCTAAGA
JMFS161G10+           AAGGAAGTAGATATAGATAGTTTGTTGTTGTGTTAAGGCCAGAACAGCATCAAGCTAAGA
JMSF005P24+           AAGGAAGTAGATATAGATAGTTTGTTGTTGTGTTAAGGCCAGAACAGCATCAAGCTAAGA
JMFS145G07+           AAGGAAGTAGATATAGATAGTTTGTTGTTGTGTTAAGGCCAGAACAGCATCAAGCTAAGA
JMSF022G01+           AAGGAAGTAGATATAGATAGTTTGTTGTTGTGTTAAGGCCAGAACAGCATCAAGCTAAGA
                      ____________________________________________________________
consensus             AAGGAAGTAGATATAGATAGTTTGTTGTTGTGTTAAGGCCAGAACAGCATCAAGCTAAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS133A06+           TTGAATGATTGAATGATTGATTTCAATGATGGAATGGAGTGGAATATGTTTCCATGTATA
JMFS073D06+           TTGAATGATTGAATGATTGATTTCAATGATGGAATGGAGTGGAATATGTTTCCATGTATA
JMFS161G10+           TTGAATGATTGAATGATTGATTTCAATGATGGAATGGAGTGGAATATGTTTCCATGTATA
JMSF005P24+           TTGAATGATTGAATGATTGATTTCAATGATGGAATGGAGTGGAATATGTTTCCATGTATA
JMFS145G07+           TTGAATGATTGAATGATTGATTTCAATGATGGAATGGAGTGGAATATGTTTCCATGTATA
JMSF022G01+           TTGAATGATTGAATGATTGATTTCAATGATGGAATGGAGTGGAATATGTTTCCATGTATA
                      ____________________________________________________________
consensus             TTGAATGATTGAATGATTGATTTCAATGATGGAATGGAGTGGAATATGTTTCCATGTATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS133A06+           TATATAGATACGGACGACCAAGTAATGCAGCAGCTGCTCCACAAGAAGAAAATTGGGAAT
JMFS073D06+           TATATAGATACGGACGACCAAGTAATGCAGCAGCTGCTCCACAAGAAGAAAATTGGGAAT
JMFS161G10+           TATATAGATACGGACGACCAAGTAATGCAGCAGCTGCTCCACAAGAAGAAAATTGGGAAT
JMSF005P24+           TATATAGATACGGACGACCAAGTAATGCAGCAGCTGCTCCACAAGAAGAAAATTGGGAAT
JMFS145G07+           TATATAGATACGGACGACCAAGTAATGCAGCAGCTGCTCCACAAGAAGAAAATTGGGAAT
JMSF022G01+           TATATAGATACGGACGACCAAGTAATGCAGCAGCTGCTCCACAAGAAGAAAATTGGGAAT
                      ____________________________________________________________
consensus             TATATAGATACGGACGACCAAGTAATGCAGCAGCTGCTCCACAAGAAGAAAATTGGGAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS133A06+           GAGGTCGGCGGGAGGGGATGGAAGATGGATAATAATAATAATAATAGATAGACAGAACAT
JMFS073D06+           GAGGTCGGCGGGAGGGGATGGAAGATGGATAATAATAATAATAATAGATAGACAGAACAT
JMFS161G10+           GAGGTCGGCGGGAGGGGATGGAAGATGGATAATAATAATAATAATAGATAGACAGAACAT
JMSF005P24+           GAGGTCGGCGGG                                                
JMFS145G07+           GAGGTCGGCGGGAGGGGATGGAAGATGGATAATAATAATAATAATAGATAGACAGAACAT
JMSF022G01+           GAGGTCGGCGGGAGGGGATGGAAGATGGATAATAATAATAATAATAGATAGACAGAACAT
                      ____________________________________________________________
consensus             GAGGTCGGCGGGAGGGGATGGAAGATGGATAATAATAATAATAATAGATAGACAGAACAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS133A06+           GAGTAGCTGGCGGCCCTGAGAGGAGAGGAAACATCTAA                      
JMFS073D06+           GAGTAGCTGGCGGCCCTGAGAGGAGAGGAAACATCTA                       
JMFS161G10+           GAGTAGCTGGCGGCCCTGAGAGGAGAGGAAACATCTAA                      
JMFS145G07+           GAGTAGCTGGCGGCCCTGAGAGGAGAGGAAACATCTAA                      
JMSF022G01+           GAGTAGCTGGCGGCCCTGAGAGGAGAGGAAACATCTAACCAGCTTCTCCATCCATCTTTC
                      ____________________________________________________________
consensus             GAGTAGCTGGCGGCCCTGAGAGGAGAGGAAACATCTAACCAGCTTCTCCATCCATCTTTC