Contig 013349:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF009K20+                         GGATTGAACCAAAGATTGAGCATTATGGCTGCATGGTAAATCTTC
                      ____________________________________________________________
consensus                            GGATTGAACCAAAGATTGAGCATTATGGCTGCATGGTAAATCTTC
 
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rJMSF009K20+          TTGGCCGAGCTGGACATTTACAAGAGGCATACGAGTTTATTAGAAGTATGAAGATAGACC
                      ____________________________________________________________
consensus             TTGGCCGAGCTGGACATTTACAAGAGGCATACGAGTTTATTAGAAGTATGAAGATAGACC
 
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rJMSF009K20+          CTGATCCGGTTTTATGGGGAACATTACTTGGTGCCTGTAGGATTCATAGAGACATCAAGC
                      ____________________________________________________________
consensus             CTGATCCGGTTTTATGGGGAACATTACTTGGTGCCTGTAGGATTCATAGAGACATCAAGC
 
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rJMSF009K20+          TGGGAGAGAAAATTGTGGAATTCCTTGTAGAATGCAATCTCGCAAATTCTGGAACATATG
                      ____________________________________________________________
consensus             TGGGAGAGAAAATTGTGGAATTCCTTGTAGAATGCAATCTCGCAAATTCTGGAACATATG
 
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rJMSF009K20+          TTCTGCTCTCCAACATATACGCTGCAGCTGGAGATTGGGATGGGGCTGCAAAGGTGAGGG
                      ____________________________________________________________
consensus             TTCTGCTCTCCAACATATACGCTGCAGCTGGAGATTGGGATGGGGCTGCAAAGGTGAGGG
 
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rJMSF009K20+          CAATGATGAAGAAAAGCGGGGTCGAGAAGGAGCCAGGTTGCAGCTCAATTGAGGTGAATA
                      ____________________________________________________________
consensus             CAATGATGAAGAAAAGCGGGGTCGAGAAGGAGCCAGGTTGCAGCTCAATTGAGGTGAATA
 
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rJMSF009K20+          ACAAGGTACATGAGTTCCTTGCCGGCGACATGAAACACCCTAAGACCAAAGAGATTTACT
                      ____________________________________________________________
consensus             ACAAGGTACATGAGTTCCTTGCCGGCGACATGAAACACCCTAAGACCAAAGAGATTTACT
 
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rJMSF009K20+          CTATGCTCGAGGAAATCAACAGGTGGCTCGAGACTCATGGTTACACTCCACAAACCGACA
JMSF021L04-                       AAATCAACAGGTGGCTCGAGACTCATGGTTACACTCCACAAACCGACA
                      ____________________________________________________________
consensus             CTATGCTCGAGGAAATCAACAGGTGGCTCGAGACTCATGGTTACACTCCACAAACCGACA
 
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rJMSF009K20+          TTGTATTGCATGACATCGGGGAGTCAGAGAAGCAGAAATCCCTGGCTGTTCACAGTGAAA
JMSF021L04-           TTGTATTGCATGACATCGGGGAGTCAGAGAAGCAGAAATCCCTGGCTGTTCACAGTGAAA
                      ____________________________________________________________
consensus             TTGTATTGCATGACATCGGGGAGTCAGAGAAGCAGAAATCCCTGGCTGTTCACAGTGAAA
 
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rJMSF009K20+          AACTTGCCATTGCGTTTGGACTGATAAGCACTCAGCCCGGAACTACAATCAAGATTGTCA
rJMSF021L04+                               TGATAANCANTCAGCCCGGAANTACAATCAAGATTGTCA
JMSF021L04-           AACTTGCCATTGCGTTTGGACTGATAAGCACTCAGCCCGGAACTACAATCAAGATTGTCA
                      ____________________________________________________________
consensus             AACTTGCCATTGCGTTTGGACTGATAAGCACTCAGCCCGGAACTACAATCAAGATTGTCA
 
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rJMSF009K20+          AAAACCTTCGGGTGTGCCAAGACTGTCATGCCGTGTCCAAACTTATCTCCAAGATCACAG
rJMSF021L04+          AAAACCTTCGGGTGTGCCANGACTGTCATGCCGTGTCCAAACTTATNTCCAAGATCACAG
JMSF021L04-           AAAACCTTCGGGTGTGCCAAGACTGTCATGCCGTGTCCAAACTTATCTCCAAGATCACAG
                      ____________________________________________________________
consensus             AAAACCTTCGGGTGTGCCAAGACTGTCATGCCGTGTCCAAACTTATCTCCAAGATCACAG
 
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rJMSF009K20+          GCAGGAAACTCATTGTTAGAGACCGGAATCGCTTCCACCATTTCGAGAATGGTTCGTGTT
rJMSF021L04+          GCAGGAAACTCATTGTTNGAGACCGGAATCGCTTCCACCATTTCGAGAATGGTTCGTGTT
JMSF021L04-           GCAGGAAACTCATTGTTAGAGACCGGAATCGCTTCCACCATTTCGAGAATGGTTCGTGTT
                      ____________________________________________________________
consensus             GCAGGAAACTCATTGTTAGAGACCGGAATCGCTTCCACCATTTCGAGAATGGTTCGTGTT
 
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rJMSF009K20+          CTTGCGGTGATTACTGGTAATTTTTATTTATTGAGCGTAAAATATATAGTCTCACTATCT
rJMSF021L04+          CTTGCGGTGATTACTGGTAATTTTTATTTATTGAGCGTAAAATATATAGTCTCACTATCT
JMSF021L04-           CTTGCGGTGATTACTGGTAATTTTTATTTATTGAGCGTAAAATATATAGTCTCACTATCT
                      ____________________________________________________________
consensus             CTTGCGGTGATTACTGGTAATTTTTATTTATTGAGCGTAAAATATATAGTCTCACTATCT
 
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rJMSF009K20+          GCT                                                         
rJMSF021L04+          GCTTAAACGCAAACGCAATCTTCAATTCTATCTTCAGAAGCTTCTTTGCTAATAATTTGT
JMSF021L04-           GCTTAAACGCAAACGCAATCTTCAATTCTATCTTCAGAAGCTTCTTTGCTAATAATTTGT
                      ____________________________________________________________
consensus             GCTTAAACGCAAACGCAATCTTCAATTCTATCTTCAGAAGCTTCTTTGCTAATAATTTGT
 
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rJMSF021L04+          ATAGTTGCT                                                   
JMSF021L04-           ATAGTTGCTATCATGTTATTATTACTAGCCAGCCATGACTCAGGAGAGATACCCTTTGGT
                      ____________________________________________________________
consensus             ATAGTTGCTATCATGTTATTATTACTAGCCAGCCATGACTCAGGAGAGATACCCTTTGGT
 
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JMSF021L04-           TAAATATGTAGAATGAAAATGTAGACATTTTTAAAAAAAATAATTTATTAAAAATTATTC
                      ____________________________________________________________
consensus             TAAATATGTAGAATGAAAATGTAGACATTTTTAAAAAAAATAATTTATTAAAAATTATTC