Contig 013348:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF011B22Sequence351013348 (2)738008513 (2)ref|XP_009759488.1|1e-96PREDICTED: probable receptor-like protein kinase At5g47070 [Nicotiana sylvestri
JMSF021I03Sequence690013348 (2)ref|XP_011093490.1|1e-25PREDICTED: probable receptor-like protein kinase At5g47070 [Sesamum indicum] re749008513 (2)ref|XP_009759488.1|7e-100PREDICTED: probable receptor-like protein kinase At5g47070 [Nicotiana sylvestri

Alignment

This contig is upended


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JMSF021I03+                                         CTGATAACCATCTCTGCTGAGTTTCTTAAT
                      ____________________________________________________________
consensus                                           CTGATAACCATCTCTGCTGAGTTTCTTAAT
 
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JMSF021I03+           CGCAACCACGATTCGGTCACCTTTACCATCAACTGGCTTAACCATTCCCTNGTACACACT
                      ____________________________________________________________
consensus             CGCAACCACGATTCGGTCACCTTTACCATCAACTGGCTTAACCATTCCCTNGTACACACT
 
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JMSF021I03+           CCCAAAACCGCCCTCTCCAACCTTAAGTAACCTGCAGAAATTATGGTTGCTTGTCTAAGT
                      ____________________________________________________________
consensus             CCCAAAACCGCCCTCTCCAACCTTAAGTAACCTGCAGAAATTATGGTTGCTTGTCTAAGT
 
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JMSF011B22+                                                     TAGGCTTCAGAGAAGCTA
JMSF021I03+           TCATTGAAGGAAAACTCTCTCAAGTTTTGAGCTTTCCCCTCGTAGGCTTCAGAGAAGCTA
                      ____________________________________________________________
consensus             TCATTGAAGGAAAACTCTCTCAAGTTTTGAGCTTTCCCCTCGTAGGCTTCAGAGAAGCTA
 
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JMSF011B22+           CGGGGAGACGAGGCTGAACATGAAGAGCGCGTGGCCCTTTCAGCCGCCCCTGAAATATCT
JMSF021I03+           CGGGGAGACGAGGCTGAACATGAAGAGCGCGTGGCCCTTTCAGCCGCCCCTGAAATATCT
                      ____________________________________________________________
consensus             CGGGGAGACGAGGCTGAACATGAAGAGCGCGTGGCCCTTTCAGCCGCCCCTGAAATATCT
 
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JMSF011B22+           GATGATTTGCTCTGCTCCTTCAACACTGGTGCTGATTTTTGTGCCTTTCCTTTGTTTCTA
JMSF021I03+           GATGATTTGCTCTGCTCCTTCAACACTGGTGCTGATTTTTGTGCCTTTCCTTTGTTTCTA
                      ____________________________________________________________
consensus             GATGATTTGCTCTGCTCCTTCAACACTGGTGCTGATTTTTGTGCCTTTCCTTTGTTTCTA
 
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JMSF011B22+           TCCTTGAAGTATAGCAAACAATTCATCTTCTCTCTCCCAATTCAATGTTCAATAGCAGCT
JMSF021I03+           TCCTTGAAGTATAGCAAACAATTCATCTTCTCTCTCCCAATTCAATGTTCAATAGCAGCT
                      ____________________________________________________________
consensus             TCCTTGAAGTATAGCAAACAATTCATCTTCTCTCTCCCAATTCAATGTTCAATAGCAGCT
 
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JMSF011B22+           CAGCTCCCTCACAATAAACTGATTTTGTTTCTATCCTTGAAGTATAGCAAACAATTCATC
JMSF021I03+           CAGCTCCCTCACAATAAACTGATTTTGTTTCTATCCTTGAAGTATAGCAAACAATTCATC
                      ____________________________________________________________
consensus             CAGCTCCCTCACAATAAACTGATTTTGTTTCTATCCTTGAAGTATAGCAAACAATTCATC
 
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JMSF011B22+           TTCTTCCCCCTTCCTCTCTCTCAATTCAATGTTCAATAACAGCTCCCTCACAATAAACTG
JMSF021I03+           TTCTTCCCCCTTCCTCTCTCTCAATTCAATGTTCAATAACAGCTCCCTCACAATAAACTG
                      ____________________________________________________________
consensus             TTCTTCCCCCTTCCTCTCTCTCAATTCAATGTTCAATAACAGCTCCCTCACAATAAACTG
 
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JMSF011B22+           ATTTTGTTCAACCGCTTGGACTCCTGGGGCTC                            
JMSF021I03+           ATTTTGTTCAACCGCTTGGACTCCTGGGGCTCAGGAAAGTGTCAACTTTCAGAAGTTAAA
                      ____________________________________________________________
consensus             ATTTTGTTCAACCGCTTGGACTCCTGGGGCTCAGGAAAGTGTCAACTTTCAGAAGTTAAA
 
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JMSF021I03+           AGATTAAATAAACATAAAGGAAATATATTAAAGATCTGGGAAGGTTTGTGAATCTTCAAC
                      ____________________________________________________________
consensus             AGATTAAATAAACATAAAGGAAATATATTAAAGATCTGGGAAGGTTTGTGAATCTTCAAC
 
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JMSF021I03+           TGTAGTTTGACTGCTTGGGGGTTGGCCCCTTTCTCTCCTGTCTCACTCAAATCTCAATCC
                      ____________________________________________________________
consensus             TGTAGTTTGACTGCTTGGGGGTTGGCCCCTTTCTCTCCTGTCTCACTCAAATCTCAATCC