Contig 013344:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS029C04Sequence603013344 (8)ref|XP_008364058.1|3e-66PREDICTED: probable serine/threonine-protein kinase WNK9 [Malus domestica]
JMFS077E01Sequence640013344 (8)ref|XP_011090722.1|3e-128PREDICTED: probable serine/threonine-protein kinase WNK9 [Sesamum indicum]
JMFS131G03Sequence642013344 (8)ref|XP_008389007.1|2e-111PREDICTED: serine/threonine-protein kinase WNK1-like [Malus domestica]
JMSF006C16Sequence257013344 (8)ref|XP_006360800.1|1e-15PREDICTED: serine/threonine-protein kinase WNK1-like [Solanum tuberosum]320001276 (4)
JMSF006J18Sequence400013344 (8)ref|XP_004247358.1|1e-50PREDICTED: probable serine/threonine-protein kinase WNK9 isoform X1 [Solanum ly
JMSF007G07Sequence381013344 (8)ref|XP_008364058.1|5e-82PREDICTED: probable serine/threonine-protein kinase WNK9 [Malus domestica]800001276 (4)ref|XP_009760923.1|1e-46PREDICTED: probable serine/threonine-protein kinase WNK9 [Nicotiana sylvestris]
JMSF021D13Sequence702013344 (8)ref|XP_008364058.1|1e-65PREDICTED: probable serine/threonine-protein kinase WNK9 [Malus domestica]252021452
JMSF030E04Sequence641013344 (8)ref|XP_008389007.1|1e-108PREDICTED: serine/threonine-protein kinase WNK1-like [Malus domestica]748001276 (4)ref|XP_009595956.1|7e-35PREDICTED: probable serine/threonine-protein kinase WNK9 [Nicotiana tomentosifo

Alignment

This contig is upended


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JMFS077E01+                                           ACTTCGGGAGCCATGAATTCCGGAGTTC
                      ____________________________________________________________
consensus                                             ACTTCGGGAGCCATGAATTCCGGAGTTC
 
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JMFS077E01+           CTACACAACGAGCAGCATGGGATTTACGGAGGATTGCAGCGAGGCCAAGATCACCAATTT
                      ____________________________________________________________
consensus             CTACACAACGAGCAGCATGGGATTTACGGAGGATTGCAGCGAGGCCAAGATCACCAATTT
 
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JMSF007G07+                     CTGGTTACCATTGATAAATATGTTGTCGCACTTGAGGTCTCTATGGATAA
JMFS077E01+           TGACTTCCCCCTGGTTACCATTGATAAATATGTTGTCGCACTTGAGGTCTCTATGGATAA
                      ____________________________________________________________
consensus             TGACTTCCCCCTGGTTACCATTGATAAATATGTTGTCGCACTTGAGGTCTCTATGGATAA
 
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JMSF007G07+           CCGGAGGGGCACGGCTATGGAGGTAGAGAAGGCCTTCCAATATCTGTTTACACCAATGCT
JMFS077E01+           CCGGAGGGGCACGGCTATGGAGGTAGAGAAGGCCTTCCAATATCTGTTTACACCAATGCT
                      ____________________________________________________________
consensus             CCGGAGGGGCACGGCTATGGAGGTAGAGAAGGCCTTCCAATATCTGTTTACACCAATGCT
 
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JMSF007G07+           TCACTGCCCTAATGTTAACCCTCTTGTGTTTCAACCTATACTGTCTTAAAGTACCAGAGG
JMFS077E01+           TCACTGCCCTAATGTTAACCCTCTTGTGTTTCAACCTATACTGTCTTAAAGTACCAGAGG
JMFS029C04+                                                 TACTGTCTTAAAGTACCAGAGG
JMFS131G03+                                                 TACTGTCTTAAAGTACCAGAGG
JMSF030E04+                                                 TACTGTCTTAAAGTACCAGAGG
JMSF021D13+                                                 TACTGTCTTAAAGTACCAGAGG
                      ____________________________________________________________
consensus             TCACTGCCCTAATGTTAACCCTCTTGTGTTTCAACCTATACTGTCTTAAAGTACCAGAGG
 
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JMSF007G07+           TGAACATCTCAGTCACAAAGTTGATGTTTCTGTTCTCAGTATCAACCCAAGAAGTGTAAA
JMFS077E01+           TGAACATCTCAGTCACAAAGTTGATGTTTCTGTTCTCAGTATCAACCCAAGAAGTGTAAA
JMFS029C04+           TGAACATCTCAGTCACAAAGTTGATGTTTCTGTTCTCAGTATCAACCCAAGAAGTGTAAA
JMFS131G03+           TGAACATCTCAGTCACAAAGTTGATGTTTCTGTTCTCAGTATCAACCCAAGAAGTGTAAA
JMSF030E04+           TGAACATCTCAGTCACAAAGTTGATGTTTCTGTTCTCAGTATCAACCCAAGAAGTGTAAA
JMSF006J18+                                                            AGAAGTGTAAA
JMSF021D13+           TGAACATCTCAGTCACAAAGTTGATGTTTCTGTTCTCAGTATCAACCCAAGAAGTGTAAA
                      ____________________________________________________________
consensus             TGAACATCTCAGTCACAAAGTTGATGTTTCTGTTCTCAGTATCAACCCAAGAAGTGTAAA
 
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JMSF007G07+           ATTTCATGATGTTCTTGTGCTTTAGGGTCTTGAGCAGGTGAATTTCACAATATAACCTCT
JMFS077E01+           ATTTCATGATGTTCTTGTGCTTTAGGGTCTTGAGCAGGTGAATTTCACAATATAACCTCT
JMFS029C04+           ATTTCATGATGTTCTTGTGCTTTAGGGTCTTGAGCAGGTGAATTTCACAATATAACCTCT
JMFS131G03+           ATTTCATGATGTTCTTGTGCTTTAGGGTCTTGAGCAGGTGAATTTCACAATATAACCTCT
JMSF030E04+           ATTTCATGATGTTCTTGTGCTTTAGGGTCTTGAGCAGGTGAATTTCACAATATAACCTCT
JMSF006J18+           ATTTCATGATGTTCTTGTGCTTTAGGGTCTTGAGCAGGTGAATTTCACAATATAACCTCT
JMSF021D13+           ATTTCATGATGTTCTTGTGCTTTAGGGTCTTGAGCAGGTGAATTTCACAATATAACCTCT
                      ____________________________________________________________
consensus             ATTTCATGATGTTCTTGTGCTTTAGGGTCTTGAGCAGGTGAATTTCACAATATAACCTCT
 
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JMSF007G07+           CAAGGTCTTCTGGGCTTTGCATAAAGTCATGAAGTTTCACCTGATTCCAGGCCACCTCAA
JMFS077E01+           CAAGGTCTTCTGGGCTTTGCATAAAGTCATGAAGTTTCACCTGATTCCAGGCCACCTCAA
JMFS029C04+           CAAGGTCTTCTGGGCTTTGCATAAAGTCATGAAGTTTCACCTGATTCCAGGCCACCTCAA
JMFS131G03+           CAAGGTCTTCTGGGCTTTGCATAAAGTCATGAAGTTTCACCTGATTCCAGGCCACCTCAA
JMSF030E04+           CAAGGTCTTCTGGGCTTTGCATAAAGTCATGAAGTTTCACCTGATTCCAGGCCACCTCAA
JMSF006J18+           CAAGGTCTTCTGGGCTTTGCATAAAGTCATGAAGTTTCACCTGATTCCAGGCCACCTCAA
JMSF021D13+           CAAGGTCTTCTGGGCTTTGCATAAAGTCATGAAGTTTCACCTGATTCCAGGCCACCTCAA
                      ____________________________________________________________
consensus             CAAGGTCTTCTGGGCTTTGCATAAAGTCATGAAGTTTCACCTGATTCCAGGCCACCTCAA
 
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JMSF007G07+           TTCCTTCATACTCATCAAAAGCTCTATAAAC                             
JMFS077E01+           TTCCTTCATACTCATCAAAAGCTCTATAAACAGTCTTGGAAGCCCCTTTACCAAGAATTT
JMFS029C04+           TTCCTTCATACTCATCAAAAGCTCTATAAACAGTCTTGGAAGCCCCTTTACCAAGAATTT
JMFS131G03+           TTCCTTCATACTCATCAAAAGCTCTATAAACAGTCTTGGAAGCCCCTTTACCAAGAATTT
JMSF030E04+           TTCCTTCATACTCATCAAAAGCTCTATAAACAGTCTTGGAAGCCCCTTTACCAAGAATTT
JMSF006J18+           TTCCTTCATACTCATCAAAAGCTCTATAAACAGTCTTGGAAGCCCCTTTACCAAGAATTT
JMSF006C16+                       CATCAAAAGCTCTATAAACAGTCTTGGAAGCCCCTTTACCAAGAATTT
JMSF021D13+           TTCCTTCATACTCATCAAAAGCTCTATAAACAGTCTTGGAAGCCCCTTTACCAAGAATTT
                      ____________________________________________________________
consensus             TTCCTTCATACTCATCAAAAGCTCTATAAACAGTCTTGGAAGCCCCTTTACCAAGAATTT
 
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JMFS077E01+           CATTGTACCTTCCATATCTTCCAGTAGGATCAACCTCAACAAACTCAGAATCATCTGATT
JMFS029C04+           CATTGTACCTTCCATATCTTCCAGTAGGATCAACCTCAACAAACTCAGAATCATCTGATT
JMFS131G03+           CATTGTACCTTCCATATCTTCCAGTAGGATCAACCTCAACAAACTCAGAATCATCTGATT
JMSF030E04+           CATTGTACCTTCCATATCTTCCAGTAGGATCAACCTCAACAAACTCAGAATCATCTGATT
JMSF006J18+           CATTGTACCTTCCATATCTTCCAGTAGGATCAACCTCAACAAACTCAGAATCATCTGATT
JMSF006C16+           CATTGTACCTTCCATATCTTCCAGTAGGATCAACCTCAACAAACTCAGAATCATCTGATT
JMSF021D13+           CATTGTACCTTCCATATCTTCCAGTAGGATCAACCTCAACAAACTCAGAATCATCTGATT
                      ____________________________________________________________
consensus             CATTGTACCTTCCATATCTTCCAGTAGGATCAACCTCAACAAACTCAGAATCATCTGATT
 
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JMFS077E01+           CTATCTCAGTGACATTATCCATTCCCTTCAATCTTCTCCCCAAATTATTCTTCACCTAAT
JMFS029C04+           CTATCTCAGTGACATTATCCATTCCCTTCAATCTTCTCCCCAAATTATTCTTCACCTAAT
JMFS131G03+           CTATCTCAGTGACATTATCCATTCCCTTCAATCTTCTCCCCAAATTATTCTTCACCTAAT
JMSF030E04+           CTATCTCAGTGACATTATCCATTCCCTTCAATCTTCTCCCCAAATTATTCTTCACTTAAT
JMSF006J18+           CTATCTCAGTGACATTATCCATTCCCTTCAATCTTCTCCCCAAATTATTCTTCACCTAAT
JMSF006C16+           CTATCTCAGTGACATTATCCATTCCCTTCAATCTTCTCCCCAAATTATTCTTCACCTAAT
JMSF021D13+           CTATCTCAGTGACATTATCCATTCCCTTCAATCTTCTCCCCAAATTATTCTTCACCTAAT
                      ____________________________________________________________
consensus             CTATCTCAGTGACATTATCCATTCCCTTCAATCTTCTCCCCAAATTATTCTTCACCTAAT
 
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JMFS077E01+           GTTCTTGATTTT                                                
JMFS029C04+           GTTCTTGATTTTTTTGGCAGTGCAGAGAGAAA                            
JMFS131G03+           GTTCTTGATTTTTTTGGCAGTGCAGAGAGAAAGAAAGAAAGAAACATGGTTTGGCAGTCC
JMSF030E04+           GTTCTTGATTTTTTTGGCAGTGCAGAGAGAAAGAAAGAAAGAAACATGGTTTGGCAGTCC
JMSF006J18+           GTTCTTGATTTTTTTGGCAGTGCAGAGAGAAAGAAAGAAAGAAACATGGTTTGGCAGTCC
JMSF006C16+           GTTCTTGATTTTTTTGGCAGTGCAGAGAGAAAGAAAGAAAGAAACATGGTTTGGCAGTCC
JMSF021D13+           GTTCTTGATTTTTTTGGCAGTGCAGAGAGAAAGAAAGAAAGAAACATGGTTTGGCAGTCC
                      ____________________________________________________________
consensus             GTTCTTGATTTTTTTGGCAGTGCAGAGAGAAAGAAAGAAAGAAACATGGTTTGGCAGTCC
 
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JMFS131G03+           TGGAGATTTTATGGTGGAA                                         
JMSF030E04+           TGGAGATTTTATGGTGGAAGAAAATCC                                 
JMSF006J18+           TGGAGATTTTATGGTGGAAGAAAATCC                                 
JMSF006C16+           TGGAGATTTTATGGTGGAAGAAAATCC                                 
JMSF021D13+           TGGAGATTTTATGGTGGAAGAAAATCCCGGGTGTACTTTCATTGCTAGGCTGTGGTTTTT
                      ____________________________________________________________
consensus             TGGAGATTTTATGGTGGAAGAAAATCCCGGGTGTACTTTCATTGCTAGGCTGTGGTTTTT
 
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JMSF021D13+           AAAACAAAAATAAAAAAAATAAAAATAAAGAAAGAAAGAGAAAAAAGAACCTATAAATTC
                      ____________________________________________________________
consensus             AAAACAAAAATAAAAAAAATAAAAATAAAGAAAGAAAGAGAAAAAAGAACCTATAAATTC