Contig 013342:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016P13Sequence614013342 (5)ref|XP_009759283.1|163PREDICTED: uncharacterized protein LOC104211847 [Nicotiana sylvestris]694011027 (4)emb|CDP09944.1|9e-32unnamed protein product [Coffea canephora]
JMFS088E07Sequence627013342 (5)ref|XP_009759283.1|157PREDICTED: uncharacterized protein LOC104211847 [Nicotiana sylvestris]
JMSF006K09Sequence432013342 (5)ref|XP_006355469.1|65.1PREDICTED: uncharacterized protein LOC102602190 [Solanum tuberosum]
JMSF020O14Sequence678013342 (5)ref|XP_009759283.1|169PREDICTED: uncharacterized protein LOC104211847 [Nicotiana sylvestris]712011027 (4)emb|CDP09944.1|5e-37unnamed protein product [Coffea canephora]
JMSF044D07Sequence807013342 (5)ref|XP_009759283.1|231PREDICTED: uncharacterized protein LOC104211847 [Nicotiana sylvestris]523011027 (4)emb|CDP09944.1|5e-24unnamed protein product [Coffea canephora]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF044D07+                                                           GGAACTGTAAGA
                      ____________________________________________________________
consensus                                                             GGAACTGTAAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF044D07+           GCCGAGGAAATCANCAGCAGAAACAGGATGAGCATGATTAAGATAACTGCAGCATGCTCT
                      ____________________________________________________________
consensus             GCCGAGGAAATCANCAGCAGAAACAGGATGAGCATGATTAAGATAACTGCAGCATGCTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF044D07+           TTCCAGAATGTGTAAATCACACCGGTTCCCAATTGGATCCCAATGTTTACTATGACAGTA
                      ____________________________________________________________
consensus             TTCCAGAATGTGTAAATCACACCGGTTCCCAATTGGATCCCAATGTTTACTATGACAGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF044D07+           ACTACAAAAATCCCCAAAGCCACAATGTTCATCATCAGCTCTTTGTACTCCATGGCTGCT
JMSF020O14+                                                     TTGTACTCCATGGCTGCT
                      ____________________________________________________________
consensus             ACTACAAAAATCCCCAAAGCCACAATGTTCATCATCAGCTCTTTGTACTCCATGGCTGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF016P13+           AGAGAAGGCATCGAGTTAGACATTAGCGTGCAGATCAAAACGCCACTGGTGAGTTTCGCT
JMSF044D07+           AGAGAAGGCATCGAGTTAGACATTAGCGTGCAGATCAAAACGCCACTGGTGAGTTTCGCT
JMFS088E07+                       GAGTTAGACATTAGCGTGCAGATCAAAACGCCACTGGTGAGTTTCGCT
JMSF020O14+           AGAGAAGGCATCGAGTTAGACATTAGCGTGCAGATCAAAACGCCACTGGTGAGTTTCGCT
                      ____________________________________________________________
consensus             AGAGAAGGCATCGAGTTAGACATTAGCGTGCAGATCAAAACGCCACTGGTGAGTTTCGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF016P13+           AGCTGATCCTGGTGGCGTGGCATCGAGGAGTTGAGATCGACGGATAATTTGGTGGCAACT
JMSF044D07+           AGCTGATCCTGGTGGCGTGGCATCGAGGAGTTGAGATCGACGGATAATTTGGTGGCAACT
JMFS088E07+           AGCTGATCCTGGTGGCGTGGCATCGAGGAGTTGAGATCGACGGATAATTTGGTGGCAACT
JMSF020O14+           AGCTGATCCTGGTGGCGTGGCATCGAGGAGTTGAGATCGACGGATAATTTGGTGGCAACT
                      ____________________________________________________________
consensus             AGCTGATCCTGGTGGCGTGGCATCGAGGAGTTGAGATCGACGGATAATTTGGTGGCAACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF016P13+           GCAATGATGGCTAAGGTTGTGGCATTGAGGGAGAAGAATTTGCAAGGGAACCAGAATTTC
JMSF044D07+           GCAATGATGGCTAAGGTTGTGGCATTGAGGGAGAAGAATTTGCAAGGGAACCAGAATTTC
JMFS088E07+           GCAATGATGGCTAAGGTTGTGGCATTGAGGGAGAAGAATTTGCAAGGGAACCAGAATTTC
JMSF020O14+           GCAATGATGGCTAAGGTTGTGGCATTGAGGGAGAAGAATTTGCAAGGGAACCAGAATTTC
                      ____________________________________________________________
consensus             GCAATGATGGCTAAGGTTGTGGCATTGAGGGAGAAGAATTTGCAAGGGAACCAGAATTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF016P13+           CTGTGGCGTAAGCCGTGGAAGACATCAGTAGCCATGGCTGCAGCACAGGCTGCAGATGCT
JMSF044D07+           CTGTGGCGTAAGCCGTGGAAGACATCAGTAGCCATGGCTGCAGCACAGGCTGCAGATGCT
JMSF006K09+              TGGCGTAAGCCGTGGAAGACATCAGTAGCCATGGCTGCAGCACAGGCTGCAGATGCT
JMFS088E07+           CTGTGGCGTAAGCCGTGGAAGACATCAGTAGCCATGGCTGCAGCACAGGCTGCAGATGCT
JMSF020O14+           CTGTGGCGTAAGCCGTGGAAGACATCAGTAGCCATGGCTGCAGCACAGGCTGCAGATGCT
                      ____________________________________________________________
consensus             CTGTGGCGTAAGCCGTGGAAGACATCAGTAGCCATGGCTGCAGCACAGGCTGCAGATGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF016P13+           ACTGCTACATAGATTCCAATCCATGGCATCGGCTCGCTGTACCGAGATTCATCCAGGTTG
JMSF044D07+           ACTGCTACATAGATTCCAATCCATGGCATCGGCTCGCTGTACCGAGATTCATCCAGGTTG
JMSF006K09+           ACTGCTACATAGATTCCAATCCATGGCATCGGCTCGCTGTACCGAGATTCATCCAGGTTG
JMFS088E07+           ACTGCTACATAGATTCCAATCCATGGCATCGGCTCGCTGTACCGAGATTCATCCAGGTTG
JMSF020O14+           ACTGCTACATAGATTCCAATCCATGGCATCGGCTCGCTGTACCGAGATTCATCCAGGTTG
                      ____________________________________________________________
consensus             ACTGCTACATAGATTCCAATCCATGGCATCGGCTCGCTGTACCGAGATTCATCCAGGTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF016P13+           CCATCCACAGTGCAGCCCTGTGGCATCTTTTCTGCAGAGAGATCAAGATTGTTCAATCTG
JMSF044D07+           CCATCCACAGTGCAGCCCTGTGGCATCTTTTCTGCAGAGAGATCAAGATTGTTCAATCTG
JMSF006K09+           CCATCCACAGTGCAGCCCTGTGGCATCTTTTCTGCAGAGAGATCAAGATTGTTCAATCTG
JMFS088E07+           CCATCCACAGTGCAGCCCTGTGGCATCTTTTCTGCAGAGAGATCAAGATTGTTCAATCTG
JMSF020O14+           CCATCCACAGTGCAGCCCTGTGGCATCTTTTCTGCAGAGAGATCAAGATTGTTCAATCTG
                      ____________________________________________________________
consensus             CCATCCACAGTGCAGCCCTGTGGCATCTTTTCTGCAGAGAGATCAAGATTGTTCAATCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF016P13+           ATTCCTAGGATTTCTGGGCATGAATGATTTTACTGGGTTCAGAAAGGGTTTCTAGGCAAC
JMSF044D07+           ATTCCTAGGATTTCTGGGCATGAATGATTTTACTGGGTTCAGAAAGGGTTTCTAGGCAAC
JMSF006K09+           ATTCCTAGGATTTCTGGGCATGAATGATTTTACTGGGTTCAGAAAGGGTTTCTAGGCAAC
JMFS088E07+           ATTCCTAGGATTTCTGGGCATGAATGATTTTACTGGGTTCAGAAAGGGTTTCTAGGCAAC
JMSF020O14+           ATTCCTAGGATTTCTGGGCATGAATGATTTTACTGGGTTCAGAAAGGGTTTCTAGGCAAC
                      ____________________________________________________________
consensus             ATTCCTAGGATTTCTGGGCATGAATGATTTTACTGGGTTCAGAAAGGGTTTCTAGGCAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF016P13+           TTTTCTGCAGAGTGATCAAGATTGTTCAATCTGATTCTTGAATGATATCCTAGGATTTCT
JMSF044D07+           TTTTCTGCAGAGTGATCAAGATTGTTCAATCTGATTCTTGAATGATATCCTAGGATTTCT
JMSF006K09+           TTTTCTGCAGAGTGATCAAGATTGTTCAATCTGATTCTTGAATGATATCCTAGGATTTCT
JMFS088E07+           TTTTCTGCAGAGTGATCAAGATTGTTCAATCTGATTCTTGAATGATATCCTAGGATTTCT
JMSF020O14+           TTTTCTGCAGAGTGATCAAGATTGTTCAATCTGATTCTTGAATGATATCCTAGGATTTCT
                      ____________________________________________________________
consensus             TTTTCTGCAGAGTGATCAAGATTGTTCAATCTGATTCTTGAATGATATCCTAGGATTTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF016P13+           GGGCATGAATGATTCTAGTTTCTGGGCATCTTTTCTTCAGAGTGATCAAGAATTCAAGAT
JMSF044D07+           GGGCATGAATGATTCTAGTTTCTGGGCATCTTTTCTTCAGAGTGATCAAGAATTCAAGAT
JMSF006K09+           GGGCATGAATGATTCTAGTTTCTGGGCATCTTTTCTTCAGAGTGATCAAGAATTCAAGAT
JMFS088E07+           GGGCATGAATGATTCTAGTTTCTGGGCATCTTTTCTTCAGAGTGATCAAGAATTCAAGAT
JMSF020O14+           GGGCATGAATGATTCTAGTTTCTGGGCATCTTTTCTTCAGAGTGATCAAGAATTCAAGAT
                      ____________________________________________________________
consensus             GGGCATGAATGATTCTAGTTTCTGGGCATCTTTTCTTCAGAGTGATCAAGAATTCAAGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF016P13+           TGTTCAATCTGATTCTTGATTGATATCCTGGGATTACTGTTATGCATATTGATTGTAGAG
JMSF044D07+           TGTTCAATCTGATTCTTGATTGATATCCTGGGATTACTGTTATGCATATTGATTGTAGAG
JMSF006K09+           TGTTCAATCTGATTCTTGATTGATATCCTGGGATTACTGTTATGCATATTGATTGTAGAG
JMFS088E07+           TGTTCAATCTGATTCTTGATTGATATCCTGGGATTACTGTTATGCATATTGATTGTAGAG
JMSF020O14+           TGTTCAATCTGATTCTTGATTGATATCCTGGGATTACTGTTATGCATATTGATTGTAGAG
                      ____________________________________________________________
consensus             TGTTCAATCTGATTCTTGATTGATATCCTGGGATTACTGTTATGCATATTGATTGTAGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF016P13+           GAAGCAGGTTTACC                                              
JMSF044D07+           GAAGCAGGTTTACC                                              
JMSF006K09+           GAAGCAGGTTTACC                                              
JMFS088E07+           GAAGCAGGTTTACCAATAATTTTTCTGGGCAAGAATGAT                     
JMSF020O14+           GAAGCAGGTTTACCAATAATTTTTCTGGGCAAGAATGATTTTACTGGGATCAGAAAGGCC
                      ____________________________________________________________
consensus             GAAGCAGGTTTACCAATAATTTTTCTGGGCAAGAATGATTTTACTGGGATCAGAAAGGCC