| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF020J20 | Sequence | 210 | 013340 (5) | 709 | 001137 (6) | ref|XP_009791554.1| | 1e-49 | PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH9 [Nico | |||
| JMSF022I17 | Sequence | 139 | 013340 (5) | 798 | 001137 (6) | ref|XP_009791554.1| | 4e-43 | PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH9 [Nico | |||
| JMSF023P15 | Sequence | 219 | 013340 (5) | 774 | 001137 (6) | ref|XP_009791554.1| | 2e-44 | PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH9 [Nico | |||
| JMSF032E03 | Sequence | 178 | 013340 (5) | 726 | 001137 (6) | ref|XP_009791554.1| | 9e-48 | PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH9 [Nico | |||
| JMSF039A17 | Sequence | 224 | 013340 (5) | 816 | 001137 (6) | ref|XP_009791554.1| | 6e-45 | PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH9 [Nico | |||
This contig is upended
. : . : . : . : . : . :
JMSF039A17+ TGAG
____________________________________________________________
consensus TGAG
. : . : . : . : . : . :
JMSF022I17+ GCAAATNCAATACTCGGTCATATATTACCTCTTAC
JMSF039A17+ ATAAGACAANNTCTGGCANTGTGCNGCAAATNCAATACTCGGTCANATATNACCTCTTAC
JMSF023P15+ GCAAATNCAATACTCGGTCANATATNACCTCTTAC
____________________________________________________________
consensus ATAAGACAANNTCTGGCANTGTGCNGCAAATNCAATACTCGGTCATATATTACCTCTTAC
. : . : . : . : . : . :
JMSF022I17+ GGAGCAAAGCCTCANTCACACGAGGTAGNNGANCAATATAAATTCTCTCTCTCTCTCTCT
JMSF039A17+ GGAGCAAAGCNTCANTCACACGAGGTAGNNGANCAATATAAATTCTCTCTCTCTCTCTCT
JMSF023P15+ GGAGCAAAGCNTCANTCACACGAGGTAGNNGANCAATATAAANTCTCTCTCTCTCTCTCT
JMSF032E03+ CTCTCTCTCTCTCTCT
JMSF020J20+ CTCTCTCTCTCTCTCT
____________________________________________________________
consensus GGAGCAAAGCCTCANTCACACGAGGTAGNNGANCAATATAAATTCTCTCTCTCTCTCTCT
. : . : . : . : . : . :
JMSF022I17+ CTCTCTCTCTCTCTCTCTCC
JMSF039A17+ CTCTCTCTCTCTCTCTCTCCCCCCTCCGCAATATATACATACATATATATACACGATTCC
JMSF023P15+ CTCTCTCTCTCTCTCTCTCCCCCCTCCGCAATATATACATACATATATATACACGATTCC
JMSF032E03+ CTCTCTCTCTCTCTCTCTCCCCCCTCCGCAATATATACATACATATATATACACGATTCC
JMSF020J20+ CTCTCTCTCTCTCTCTCTCCCCCCTCCGCAATATATACATACATATATATACACGATTCC
____________________________________________________________
consensus CTCTCTCTCTCTCTCTCTCCCCCCTCCGCAATATATACATACATATATATACACGATTCC
. : . : . : . : . : . :
JMSF039A17+ TGTATCAGCCGCAGCGTAGCTAACTTTGCTTTCGACTC
JMSF023P15+ TGTATCAGCCGCAGCGTAGCTAACTTTGCTTTCGACTC
JMSF032E03+ TGTATCAGCCGCAGCGTAGCTAACTTTGCTTTCGACTCACTCTCTCTCTCTCTCTCTAAA
JMSF020J20+ TGTATCAGCCGCAGCGTAGCTAACTTTGCTTTCGACTCACTCTCTCTCTCTCTCTCTAAA
____________________________________________________________
consensus TGTATCAGCCGCAGCGTAGCTAACTTTGCTTTCGACTCACTCTCTCTCTCTCTCTCTAAA
. : . : . : . : . : . :
JMSF032E03+ AGTATAATACCCGTGAAAACGTGGAGTACGT
JMSF020J20+ AGTATAATACCCGTGAAAACGTAGAGTACGTTACTTTCCGTTTACGAGGACGGTTTCCCC
____________________________________________________________
consensus AGTATAATACCCGTGAAAACGTGGAGTACGTTACTTTCCGTTTACGAGGACGGTTTCCCC