Contig 013335:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF020A07+                                                             GGGGGGTTT
JMSF020A07-                                                              GGGGGGTTT
                      ____________________________________________________________
consensus                                                                GGGGGGTTT
 
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rJMSF020A07+          AAGAGCAGCCATGGAAAACAATTCCTCCACTGCAAACCCAAACCCTAGCCAGCCGATCGC
JMSF020A07-           AAGAGCAGCCATGGAAAACAATTCCTCCACTGCAAACCCAAACCCTAGCCAGCCGATCGC
                      ____________________________________________________________
consensus             AAGAGCAGCCATGGAAAACAATTCCTCCACTGCAAACCCAAACCCTAGCCAGCCGATCGC
 
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rJMSF020A07+          AATGTCTCCGTCAAAATCCGTACAAAGCGAGGCCAGCCCAGAAACGGAAACCCCAGAACC
JMSF020A07-           AATGTCTCCGTCAAAATCCGTACAAAGCGAGGCCAGCCCAGAAACGGAAACCCCAGAACC
                      ____________________________________________________________
consensus             AATGTCTCCGTCAAAATCCGTACAAAGCGAGGCCAGCCCAGAAACGGAAACCCCAGAACC
 
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rJMSF020A07+          CGATGCCCCAATCAGAGAATCCTCAGATCCCCCGCCGGAGAAGAGCGATCAAGAATCCCA
JMSF020A07-           CGATGCCCCAATCAGAGAATCCTCAGATCCCCCGCCGGAGAAGAGCGATCAAGAATCCCA
                      ____________________________________________________________
consensus             CGATGCCCCAATCAGAGAATCCTCAGATCCCCCGCCGGAGAAGAGCGATCAAGAATCCCA
 
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rJMSF020A07+          AGAGGAAATTCAAGAAGAAGGGGAGGAAGAGGAGGAGGAAGGGGAATGCGGGTTTTGCTT
JMSF020A07-           AGAGGAAATTCAAGAAGAAGGGGAGGAAGAGGAGGAGGAAGGGGAATGCGGGTTTTGCTT
                      ____________________________________________________________
consensus             AGAGGAAATTCAAGAAGAAGGGGAGGAAGAGGAGGAGGAAGGGGAATGCGGGTTTTGCTT
 
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rJMSF020A07+          GTTCATGAAGGGGGGAGGGTGTAGAGACCCCTTTATCGAGTGGGAGAAGTGTGTGGAAGA
JMSF020A07-           GTTCATGAAGGGGGGAGGGTGTAGAGACCCCTTTATCGAGTGGGAGAAGTGTGTGGAAGA
                      ____________________________________________________________
consensus             GTTCATGAAGGGGGGAGGGTGTAGAGACCCCTTTATCGAGTGGGAGAAGTGTGTGGAAGA
 
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rJMSF020A07+          AGGCGAGAAGAACAAGGAAGACATTGTTGAAAAATGCTTCGAGGTCACATCTGCTCTGAA
JMSF020A07-           AGGCGAGAAGAACAAGGAAGACATTGTTGAAAAATGCTTCGAGGTCACATCTGCTCTGAA
                      ____________________________________________________________
consensus             AGGCGAGAAGAACAAGGAAGACATTGTTGAAAAATGCTTCGAGGTCACATCTGCTCTGAA
 
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rJMSF020A07+          GAAGTGTATGGAGGCGCACTCGGATTACTATTCCCCAATTTTGCAGGCGGAGAAGGCTGC
JMSF020A07-           GAAGTGTATGGAGGCGCACTCGGATTACTATTCCCCAATTTTGCAGGCGGAGAAGGCTGC
                      ____________________________________________________________
consensus             GAAGTGTATGGAGGCGCACTCGGATTACTATTCCCCAATTTTGCAGGCGGAGAAGGCTGC
 
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rJMSF020A07+          TGAGGCCGAGGCCCTGAAGGAATTGGAGATGGAGAAGGAGAAAGCGGACGAAAGTAATTC
JMSF020A07-           TGAGGCCGAGGCCCTGAAGGAATTGGAGATGGAGAAGGAGAAAGCGGACGAAAGTAATTC
                      ____________________________________________________________
consensus             TGAGGCCGAGGCCCTGAAGGAATTGGAGATGGAGAAGGAGAAAGCGGACGAAAGTAATTC
 
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rJMSF020A07+          TGAATCAGGATCGACAGTAACGGTGGGAGATTCAGAGAGTTCTGAGAAAAAGGAGTCTTG
JMSF020A07-           TGAATCAGGATCGACAGTAACGGTGGGAGATTCAGAGAGTTCTGAGAAAAAGGAGTCTTG
                      ____________________________________________________________
consensus             TGAATCAGGATCGACAGTAACGGTGGGAGATTCAGAGAGTTCTGAGAAAAAGGAGTCTTG
 
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rJMSF020A07+          ACTTTGGTAATCAAAAGAATTGAGCTTTTTTTGTTATTATTTTTTCCAGCTATACATGAT
JMSF020A07-           ACTTTGGTAATCAAAAGAATTGAGCTTTTTTTGTTATTATTTTTTCCAGCTATACATGAT
                      ____________________________________________________________
consensus             ACTTTGGTAATCAAAAGAATTGAGCTTTTTTTGTTATTATTTTTTCCAGCTATACATGAT
 
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rJMSF020A07+          TTTGATCAAGAGAAAGTTATGGATATTACAAAGCTTATTACTAACATTGATATTCTCAAA
JMSF020A07-           TTTGATCAAGAGAAAGTTATGGATATTACAAAGCTTATTACTAACATTGATATTCTCAAA
                      ____________________________________________________________
consensus             TTTGATCAAGAGAAAGTTATGGATATTACAAAGCTTATTACTAACATTGATATTCTCAAA
 
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rJMSF020A07+          TAATCGTGTCGAGATTAACC                                        
JMSF020A07-           TAATCGTGTCGAGATTAACCAANTTTATGGATTCATATGACTCTATTTTGGAATCANTTA
                      ____________________________________________________________
consensus             TAATCGTGTCGAGATTAACCAANTTTATGGATTCATATGACTCTATTTTGGAATCANTTA