Contig 013332:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF038C16Sequence519013332 (2)ref|XP_009771280.1|6e-73PREDICTED: glucan endo-1,3-beta-glucosidase 2-like [Nicotiana sylvestris]
JMSF019H11Sequence516013332 (2)ref|XP_009771280.1|7e-68PREDICTED: glucan endo-1,3-beta-glucosidase 2-like [Nicotiana sylvestris]731004253 (2)ref|XP_009771279.1|1e-70PREDICTED: glucan endo-1,3-beta-glucosidase 12-like, partial [Nicotiana sylvest

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF038C16+                                                         CNTAATATCTCCAT
                      ____________________________________________________________
consensus                                                           CNTAATATCTCCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF038C16+           GGAGATNGAACTTGACAAGAGCTTCGTGGATGTTTTTCATGGCGGGGATAAGAAACCGGG
JMSF019H11+                                   CGTGGATGTTTTTCATGGCGGGGATAAGAAACCGGG
                      ____________________________________________________________
consensus             GGAGATNGAACTTGACAAGAGCTTCGTGGATGTTTTTCATGGCGGGGATAAGAAACCGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF038C16+           TCGTATTATGCGGGTCAACAAACACCTCATTCCCGACGGCGATGGCCTCGATCCTGGTAT
JMSF019H11+           TCGTATTATGCGGGTCAACAAACACCTCATTCCCGACGGCGATGGCCTCGATCCTGGTAT
                      ____________________________________________________________
consensus             TCGTATTATGCGGGTCAACAAACACCTCATTCCCGACGGCGATGGCCTCGATCCTGGTAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF038C16+           CCGGGTGGTGGGCGGCGACATTACGCTGGACCCAGGCGTACGCGAACGACTCCCGTTTAG
JMSF019H11+           CCGGGTGGTGGGCGGCGACATTACGCTGGACCCAGGCGTACGCAAACGACTCCCGTTTAG
                      ____________________________________________________________
consensus             CCGGGTGGTGGGCGGCGACATTACGCTGGACCCAGGCGTACGCGAACGACTCCCGTTTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF038C16+           CCGCATTGTAGAGCTGCTCGTTGGGGAGGTTGACGGTGAGCTTTATACCGGATCCGGAAA
JMSF019H11+           CCGCATTGTAGAGCTGCTCGTTGGGGAGGTTGACGGTGAGCTTTATACCGGATCCGGAAA
                      ____________________________________________________________
consensus             CCGCATTGTAGAGCTGCTCGTTGGGGAGGTTGACGGTGAGCTTTATACCGGATCCGGAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF038C16+           ACGCCTTGAGAACAGCCGGGTCGGTGTCGTAAACCTTGACCCGATCCAACCCCTGCGACT
JMSF019H11+           ACGCCTTGAGAACAGCCGGGTCGGTGTCGTAAACCTTGACCCGATCCAACCCCTGCGACT
                      ____________________________________________________________
consensus             ACGCCTTGAGAACAGCCGGGTCGGTGTCGTAAACCTTGACCCGATCCAACCCCTGCGACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF038C16+           TAAGAAGCTCCACCACCTTCACAGCCGACGGCAGGTTGTTAGCAACCCTGCCGTAGTTCA
JMSF019H11+           TAAGAAGCTCCACCACCTTCACAGCCGACGGCAGGTTGTTAGCAACCCTGCCGTAGTTCA
                      ____________________________________________________________
consensus             TAAGAAGCTCCACCACCTTCACAGCCGACGGCAGGTTGTTAGCAACCCTGCCGTAGTTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF038C16+           CTCCTATCGAGCCACCGTCTGCAAAAGTAACGGCGGAAACGGAAATGAGGAGGAGAGGGA
JMSF019H11+           CTCCTATCGAGCCACCGTCTGCAAAAGTAACGGCGGAAACGGAAATGAGGAGGAGAGGGA
                      ____________________________________________________________
consensus             CTCCTATCGAGCCACCGTCTGCAAAAGTAACGGCGGAAACGGAAATGAGGAGGAGAGGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF038C16+           GGAAGGAGAAGTACTCCATGCGCGCTCTGGTTCTACAGACACAGAAGCAGAGCACGAAAA
JMSF019H11+           GGAAGGAGAAGTACTCCATGCGCGCTCTGGTTCTACAGACACAGAAGCAGAGCACGAAAA
                      ____________________________________________________________
consensus             GGAAGGAGAAGTACTCCATGCGCGCTCTGGTTCTACAGACACAGAAGCAGAGCACGAAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF038C16+           AGAGAGAGAATTACAGAGCAGAAAT                                   
JMSF019H11+           AGAGAGAGAATTACAGAGCAGAAATAGTGGGAGAAGGGAGTGAAGTTAATAAATGGAGTA
                      ____________________________________________________________
consensus             AGAGAGAGAATTACAGAGCAGAAATAGTGGGAGAAGGGAGTGAAGTTAATAAATGGAGTA